Richard Hughey

Publication Activity (10 Years)

Years Active: 1990-2016
Publications (10 Years): 1

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Publications

Jeren Samandari-Rad, Richard Hughey
Power/Energy Minimization Techniques for Variability-Aware High-Performance 16-nm 6T-SRAM. IEEE Access 4 (2016)
Jeren Samandari-Rad, Matthew R. Guthaus, Richard Hughey
Confronting the Variability Issues Affecting the Performance of Next-Generation SRAM Design to Optimize and Predict the Speed and Yield. IEEE Access 2 (2014)
Jeren Samandari-Rad, Matthew R. Guthaus, Richard Hughey
VAR-TX: A variability-aware SRAM model for predicting the optimum architecture to achieve minimum access-time for yield enhancement in nano-scaled CMOS. ISQED (2012)
Andrew W. Hill, Andrea Di Blas, Richard Hughey
FPGA-based fine-grain parallel computing (abstract only). FPGA (2011)
Richard Hughey, Andrea Di Blas
Finding the Next Computational Model: Experience with the UCSC Kestrel. J. Signal Process. Syst. 53 (1-2) (2008)
Richard Hughey, Andrea Di Blas
The UCSC Kestrel Application-Unspecific Processor. ASAP (2006)
Andrea Di Blas, David M. Dahle, Mark Diekhans, Leslie Grate, Jeffrey D. Hirschberg, Kevin Karplus, Hansjörg Keller, Mark Kendrick, Francisco J. Mesa-Martinez, David Pease, Eric Rice, Angela Schultz, Don Speck, Richard Hughey
The UCSC Kestrel Parallel Processor. IEEE Trans. Parallel Distributed Syst. 16 (1) (2005)
Andrea Di Blas, Arun Jagota, Richard Hughey
Optimizing neural networks on SIMD parallel computers. Parallel Comput. 31 (1) (2005)
Kevin Karplus, Rachel Karchin, George Shackelford, Richard Hughey
-values for hidden Markov models using reverse-sequence null models. Bioinform. 21 (22) (2005)
Eric Rice, Richard Hughey
A New Iterative Structure for Hardware Division: The Parallel Paths Algorithm. IEEE Symposium on Computer Arithmetic (2003)
Andrea Di Blas, Arun Jagota, Richard Hughey
A Range-Compaction Heuristic for Graph Coloring. J. Heuristics 9 (6) (2003)
Andrea Di Blas, Arun Jagota, Richard Hughey
Energy function-based approaches to graph coloring. IEEE Trans. Neural Networks 13 (1) (2002)
Melissa S. Cline, Richard Hughey, Kevin Karplus
Predicting reliable regions in protein sequence alignments. Bioinform. 18 (2) (2002)
Thomas E. Ferrin, Bruce A. Foster, Richard Hughey
High Performance Computing for Computational Biology - Session Introduction. Pacific Symposium on Biocomputing (2001)
Eric Rice, Richard Hughey
Molecular Fingerprinting on the SIMD Parallel Processor Kestrel. Pacific Symposium on Biocomputing (2001)
Leslie Grate, Mark Diekhans, David M. Dahle, Richard Hughey
Sequence Analysis With the Kestrel SIMD Parallel Processor. Pacific Symposium on Biocomputing (2001)
Andrea Di Blas, Richard Hughey
Explicit SIMD Programming for Asynchronous Applications. ASAP (2000)
Raymond Wheeler, Richard Hughey
Optimizing reduced-space sequence analysis. Bioinform. 16 (12) (2000)
David M. Dahle, Leslie Grate, Eric Rice, Richard Hughey
The UCSC Kestrel General Purpose Parallel Processor. PDPTA (1999)
C. Tarnas, Richard Hughey
Reduced space hidden Markov model training. Bioinform. 14 (5) (1998)
Jeffrey D. Hirschberg, David M. Dahle, Kevin Karplus, Don Speck, Richard Hughey
Kestrel: A Programmable Array for Sequence Analysis. J. VLSI Signal Process. 19 (2) (1998)
Rachel Karchin, Richard Hughey
Weighting hidden Markov models for maximum discrimination. Bioinform. 14 (9) (1998)
Kevin Karplus, Christian Barrett, Richard Hughey
Hidden Markov models for detecting remote protein homologies. Bioinform. 14 (10) (1998)
David M. Dahle, Jeffrey D. Hirschberg, Kevin Karplus, Hansjörg Keller, Eric Rice, Don Speck, Douglas H. Williams, Richard Hughey
Kestrel: Design of an 8-bit SIMD Parallel Processor. ARVLSI (1997)
Eric Rice, Richard Hughey
Multiprecision Division on an 8-bit Processor. IEEE Symposium on Computer Arithmetic (1997)
J. Z. Dalgaard, M. J. Moser, Richard Hughey, I. Saira Mian
Statistic Modeling, Phylogenetic Analysis and Strjucture Prediction of a Protein Splicing Domain Common to Infeins and Hedgehog Proteins. J. Comput. Biol. 4 (2) (1997)
J. Alicia Grice, Richard Hughey, Don Speck
Reduced space sequence alignment. Comput. Appl. Biosci. 13 (1) (1997)
Christian Barrett, Richard Hughey, Kevin Karplus
Scoring hidden Markov models. Comput. Appl. Biosci. 13 (2) (1997)
Richard Hughey, Anders Krogh
Hidden Markov models for sequence analysis: extension and analysis of the basic method. Comput. Appl. Biosci. 12 (2) (1996)
Richard Hughey
Parallel hardware for sequence comparison and alignment. Comput. Appl. Biosci. 12 (6) (1996)
Kimmen Sjölander, Kevin Karplus, Michael Brown, Richard Hughey, Anders Krogh, I. Saira Mian, David Haussler
Dirichlet mixtures: a method for improved detection of weak but significant protein sequence homology. Comput. Appl. Biosci. 12 (4) (1996)
Jeffrey D. Hirschberg, Richard Hughey, Kevin Karplus, Don Speck
Kestrel: A Programmable Array for Sequence Analysis. ASAP (1996)
J. Alicia Grice, Richard Hughey, Don Speck
Parallel Sequence Alignment in Limited Space. ISMB (1995)
Richard Hughey
Parallel Sequence Comparison and Alignment. ASAP (1995)
Yasubumi Sakakibara, Michael Brown, Richard Hughey, I. Saira Mian, Kimmen Sjölander, Rebecca C. Underwood, David Haussler
Recent Methods for RNA Modeling Using Stochastic Context-Free Grammars. CPM (1994)
Leslie Grate, Mark Herbster, Richard Hughey, David Haussler, I. Saira Mian, Harry Noller
RNA Modeling Using Gibbs Sampling and Stochastic Context Free Grammars. ISMB (1994)
Michael Brown, Richard Hughey, Anders Krogh, I. Saira Mian, Kimmen Sjölander, David Haussler
Using Dirichlet Mixture Priors to Derive Hidden Markov Models for Protein Families. ISMB (1993)
Richard Hughey
Concurrent Error Detection on Programmable Systolic Arrays. IEEE Trans. Computers 42 (6) (1993)
Richard Hughey
Programming systolic arrays. ASAP (1992)
Richard Hughey, Daniel P. Lopresti
B-SYS: A 470-Processor Programmable Systolic Array. ICPP (1) (1991)
Richard Hughey, Daniel P. Lopresti
A software approach to fault detection on programmable systolic arrays. SPDP (1990)