Rafeef Abugharbieh

Publication Activity (10 Years)

Years Active: 2003-2018
Publications (10 Years): 16

Top Topics

Replicator Dynamics

Brain Activation

Minimally Invasive

Top Venues

IEEE Trans. Medical Imaging

Publications

Chendi Wang, Rafeef Abugharbieh
Coactivated Clique Based Multisource Overlapping Brain Subnetwork Extraction. CoRR (2018)
Prashant Pandey, Pierre Guy, Antony J. Hodgson, Rafeef Abugharbieh
Fast and automatic bone segmentation and registration of 3D ultrasound to CT for the full pelvic anatomy: a comparative study. Int. J. Comput. Assist. Radiol. Surg. 13 (10) (2018)
Mohammad Arafat Hussain, Alborz Amir-Khalili, Ghassan Hamarneh, Rafeef Abugharbieh
Collage CNN for Renal Cell Carcinoma Detection from CT. MLMI@MICCAI (2017)
Negar M. Harandi, Ian Stavness, Jonghye Woo, Maureen Stone, Rafeef Abugharbieh, Sidney S. Fels
Subject-specific biomechanical modelling of the oropharynx: towards speech production. Comput. methods Biomech. Biomed. Eng. Imaging Vis. 5 (6) (2017)
Chendi Wang, Bernard Ng, Rafeef Abugharbieh
Multimodal Brain Subnetwork Extraction Using Provincial Hub Guided Random Walks. IPMI (2017)
Alborz Amir-Khalili, Soheil Kianzad, Rafeef Abugharbieh, Ivan Beschastnikh
Scalable and Fault Tolerant Platform for Distributed Learning on Private Medical Data. MLMI@MICCAI (2017)
Olivia Paserin, Kishore Mulpuri, Anthony Cooper, Antony J. Hodgson, Rafeef Abugharbieh
Automatic Near Real-Time Evaluation of 3D Ultrasound Scan Adequacy for Developmental Dysplasia of the Hip. CARE/CLIP@MICCAI (2017)
Mohammad Arafat Hussain, Alborz Amir-Khalili, Ghassan Hamarneh, Rafeef Abugharbieh
Segmentation-Free Kidney Localization and Volume Estimation Using Aggregated Orthogonal Decision CNNs. MICCAI (3) (2017)
Niamul Quader, Antony J. Hodgson, Kishore Mulpuri, Anthony Cooper, Rafeef Abugharbieh
A 3D Femoral Head Coverage Metric for Enhanced Reliability in Diagnosing Hip Dysplasia. MICCAI (1) (2017)
Alborz Amir-Khalili, Ghassan Hamarneh, Rafeef Abugharbieh
Modelling and extraction of pulsatile radial distension and compression motion for automatic vessel segmentation from video. Medical Image Anal. 40 (2017)
Masoud S. Nosrati, Rafeef Abugharbieh, Jean-Marc Peyrat, Julien Abinahed, Osama Al-Alao, Abdulla Al-Ansari, Ghassan Hamarneh
Simultaneous Multi-Structure Segmentation and 3D Nonrigid Pose Estimation in Image-Guided Robotic Surgery. IEEE Trans. Medical Imaging 35 (1) (2016)
Masoud S. Nosrati, Alborz Amir-Khalili, Jean-Marc Peyrat, Julien Abinahed, Osama Al-Alao, Abdulla Al-Ansari, Rafeef Abugharbieh, Ghassan Hamarneh
Endoscopic scene labelling and augmentation using intraoperative pulsatile motion and colour appearance cues with preoperative anatomical priors. Int. J. Comput. Assist. Radiol. Surg. 11 (8) (2016)
Niamul Quader, Antony J. Hodgson, Kishore Mulpuri, Anthony Cooper, Rafeef Abugharbieh
Towards Reliable Automatic Characterization of Neonatal Hip Dysplasia from 3D Ultrasound Images. MICCAI (1) (2016)
Burak Yoldemir, Bernard Ng, Rafeef Abugharbieh
Stable Overlapping Replicator Dynamics for Brain Community Detection. IEEE Trans. Medical Imaging 35 (2) (2016)
Chendi Wang, Bernard Ng, Rafeef Abugharbieh
Modularity Reinforcement for Improving Brain Subnetwork Extraction. MICCAI (1) (2016)
Mohammad Arafat Hussain, Ghassan Hamarneh, Timothy W. O'Connell, Mohammed F. Mohammed, Rafeef Abugharbieh
Segmentation-Free Estimation of Kidney Volumes in CT with Dual Regression Forests. MLMI@MICCAI (2016)
Moshiur Rahman Farazi, Bonnie Martin-Harris, Negar M. Harandi, Sidney S. Fels, Rafeef Abugharbieh
A 3D dynamic biomechanical swallowing model for training and diagnosis of dysphagia. ISBI (2015)
Chendi Wang, Burak Yoldemir, Rafeef Abugharbieh
Multimodal Cortical Parcellation Based on Anatomical and Functional Brain Connectivity. MICCAI (3) (2015)
Alborz Amir-Khalili, Ghassan Hamarneh, Jean-Marc Peyrat, Julien Abinahed, Osama Al-Alao, Abdulla Al-Ansari, Rafeef Abugharbieh
Automatic segmentation of occluded vasculature via pulsatile motion analysis in endoscopic robot-assisted partial nephrectomy video. Medical Image Anal. 25 (1) (2015)
Ilker Hacihaliloglu, Pierre Guy, Antony J. Hodgson, Rafeef Abugharbieh
Automatic extraction of bone surfaces from 3D ultrasound images in orthopaedic trauma cases. Int. J. Comput. Assist. Radiol. Surg. 10 (8) (2015)
Niamul Quader, Antony J. Hodgson, Kishore Mulpuri, Thomas Savage, Rafeef Abugharbieh
Automatic assessment of developmental dysplasia of the hip. ISBI (2015)
Burak Yoldemir, Bernard Ng, Rafeef Abugharbieh
Coupled Stable Overlapping Replicator Dynamics for Multimodal Brain Subnetwork Identification. IPMI (2015)
Negar M. Harandi, Rafeef Abugharbieh, Sidney S. Fels
3D segmentation of the tongue in MRI: a minimally interactive model-based approach. Comput. methods Biomech. Biomed. Eng. Imaging Vis. 3 (4) (2015)
Negar M. Harandi, Jonghye Woo, Moshiur Rahman Farazi, Ian Stavness, Maureen Stone, Sidney S. Fels, Rafeef Abugharbieh
Subject-specific biomechanical modelling of the oropharynx with application to speech production. ISBI (2015)
Chendi Wang, Burak Yoldemir, Rafeef Abugharbieh
Improved functional cortical parcellation using a neighborhood-information-embedded affinity matrix. ISBI (2015)
Alborz Amir-Khalili, Ghassan Hamarneh, Rafeef Abugharbieh
Automatic Vessel Segmentation from Pulsatile Radial Distension. MICCAI (3) (2015)
Mohammad Bajammal, Burak Yoldemir, Rafeef Abugharbieh
Comparison of structural connectivity metrics for multimodal brain image analysis. ISBI (2015)
Ivan Figueroa-Garcia, Jean-Marc Peyrat, Ghassan Hamarneh, Rafeef Abugharbieh
Biomechanical kidney model for predicting tumor displacement in the presence of external pressure load. ISBI (2014)
Mohammad Arafat Hussain, Antony J. Hodgson, Rafeef Abugharbieh
Robust Bone Detection in Ultrasound Using Combined Strain Imaging and Envelope Signal Power Detection. MICCAI (1) (2014)
Masoud S. Nosrati, Jean-Marc Peyrat, Julien Abinahed, Osama Al-Alao, Abdulla Al-Ansari, Rafeef Abugharbieh, Ghassan Hamarneh
Efficient Multi-organ Segmentation in Multi-view Endoscopic Videos Using Pre-operative Priors. MICCAI (2) (2014)
Alborz Amir-Khalili, Jean-Marc Peyrat, Julien Abinahed, Osama Al-Alao, Abdulla Al-Ansari, Ghassan Hamarneh, Rafeef Abugharbieh
Auto Localization and Segmentation of Occluded Vessels in Robot-Assisted Partial Nephrectomy. MICCAI (1) (2014)
Niamul Quader, Antony J. Hodgson, Rafeef Abugharbieh
Confidence Weighted Local Phase Features for Robust Bone Surface Segmentation in Ultrasound. CLIP@MICCAI (2014)
Burak Yoldemir, Bernard Ng, Rafeef Abugharbieh
Effects of tractography approach on consistency between anatomical and functional connectivity estimates. ISBI (2014)
Jeremy Kawahara, Jean-Marc Peyrat, Julien Abinahed, Osama Al-Alao, Abdulla Al-Ansari, Rafeef Abugharbieh, Ghassan Hamarneh
Automatic Labelling of Tumourous Frames in Free-Hand Laparoscopic Ultrasound Video. MICCAI (2) (2014)
Alborz Amir-Khalili, Masoud S. Nosrati, Jean-Marc Peyrat, Ghassan Hamarneh, Rafeef Abugharbieh
Uncertainty-Encoded Augmented Reality for Robot-Assisted Partial Nephrectomy: A Phantom Study. AE-CAI (2013)
Burak Yoldemir, Bernard Ng, Todd S. Woodward, Rafeef Abugharbieh
Fiber Connectivity Integrated Brain Activation Detection. IPMI (2013)
Alborz Amir-Khalili, Antony J. Hodgson, Rafeef Abugharbieh
Real-time extraction of local phase features from volumetric medical image data. ISBI (2013)
Alborz Amir-Khalili, Jean-Marc Peyrat, Ghassan Hamarneh, Rafeef Abugharbieh
3D Surface Reconstruction of Organs Using Patient-Specific Shape Priors in Robot-Assisted Laparoscopic Surgery. Abdominal Imaging (2013)
Burak Yoldemir, Bernard Ng, Rafeef Abugharbieh
Overlapping Replicator Dynamics for Functional Subnetwork Identification. MICCAI (2) (2013)
Sylvain Bernhardt, Julien Abi-Nahed, Rafeef Abugharbieh
Robust Dense Endoscopic Stereo Reconstruction for Minimally Invasive Surgery. MCV (2012)
K. Krishna Nand, Ghassan Hamarneh, Rafeef Abugharbieh
Diffusion tensor image processing using biquaternions. ISBI (2012)
Bernard Ng, Martin J. McKeown, Rafeef Abugharbieh
Group Replicator Dynamics: A Novel Group-Wise Evolutionary Approach for Sparse Brain Network Detection. IEEE Trans. Medical Imaging 31 (3) (2012)
Burak Yoldemir, Bernard Ng, Rafeef Abugharbieh
Deconfounding the Effects of Resting State Activity on Task Activation Detection in fMRI. MBIA (2012)
Bernard Ng, Ghassan Hamarneh, Rafeef Abugharbieh
Modeling Brain Activation in fMRI Using Group MRF. IEEE Trans. Medical Imaging 31 (5) (2012)
Bernard Ng, Viviana Siless, Gaël Varoquaux, Jean-Baptiste Poline, Bertrand Thirion, Rafeef Abugharbieh
Connectivity-informed Sparse Classifiers for fMRI Brain Decoding. PRNI (2012)
Ilker Hacihaliloglu, Anna Brounstein, Pierre Guy, Antony J. Hodgson, Rafeef Abugharbieh
3D Ultrasound-CT Registration in Orthopaedic Trauma Using GMM Registration with Optimized Particle Simulation-Based Data Reduction. MICCAI (2) (2012)
Bernard Ng, Rafeef Abugharbieh, Gaël Varoquaux, Jean-Baptiste Poline, Bertrand Thirion
Connectivity-Informed fMRI Activation Detection. MICCAI (2) (2011)
Anna Brounstein, Ilker Hacihaliloglu, Pierre Guy, Antony J. Hodgson, Rafeef Abugharbieh
Towards Real-Time 3D US to CT Bone Image Registration Using Phase and Curvature Feature Based GMM Matching. MICCAI (1) (2011)
Andrew Top, Ghassan Hamarneh, Rafeef Abugharbieh
Active Learning for Interactive 3D Image Segmentation. MICCAI (3) (2011)
Bernard Ng, Rafeef Abugharbieh
Modeling Spatiotemporal Structure in fMRI Brain Decoding Using Generalized Sparse Classifiers. PRNI (2011)
Bernard Ng, Rafeef Abugharbieh
Generalized Sparse Regularization with Application to fMRI Brain Decoding. IPMI (2011)
Bernard Ng, Rafeef Abugharbieh
Generalized group sparse classifiers with application in fMRI brain decoding. CVPR (2011)
K. Krishna Nand, Rafeef Abugharbieh, Brian G. Booth, Ghassan Hamarneh
Detecting Structure in Diffusion Tensor MR Images. MICCAI (2) (2011)
Albert Huang, Rafeef Abugharbieh, Roger C. Tam
A Novel Rotationally Invariant Region-Based Hidden Markov Model for Efficient 3-D Image Segmentation. IEEE Trans. Image Process. 19 (10) (2010)
Victor Sanchez, Rafeef Abugharbieh, Panos Nasiopoulos
3-D Scalable Medical Image Compression With Optimized Volume of Interest Coding. IEEE Trans. Medical Imaging 29 (10) (2010)
Bernard Ng, Arash Vahdat, Ghassan Hamarneh, Rafeef Abugharbieh
Generalized Sparse Classifiers for Decoding Cognitive States in fMRI. MLMI (2010)
Josna Rao, Rafeef Abugharbieh, Ghassan Hamarneh
Adaptive Regularization for Image Segmentation Using Local Image Curvature Cues. ECCV (4) (2010)
Bernard Ng, Rafeef Abugharbieh, Ghassan Hamarneh
Group MRF for fMRI activation detection. CVPR (2010)
Rupin Dalvi, Ilker Hacihaliloglu, Rafeef Abugharbieh
3D ultrasound volume stitching using phase symmetry and harris corner detection for orthopaedic applications. Medical Imaging: Image Processing (2010)
Andrew Top, Ghassan Hamarneh, Rafeef Abugharbieh
Spotlight: Automated Confidence-Based User Guidance for Increasing Efficiency in Interactive 3D Image Segmentation. MCV (2010)
Lisa Tang, Ghassan Hamarneh, Rafeef Abugharbieh
Reliability-Driven, Spatially-Adaptive Regularization for Deformable Registration. WBIR (2010)
Bernard Ng, Ghassan Hamarneh, Rafeef Abugharbieh
Detecting Brain Activation in fMRI Using Group Random Walker. MICCAI (2) (2010)
Albert Huang, Rafeef Abugharbieh, Roger C. Tam
A Fuzzy Region-Based Hidden Markov Model for Partial-Volume Classification in Brain MRI. MICCAI (1) (2009)
Victor Sanchez, Rafeef Abugharbieh, Panos Nasiopoulos
Symmetry-Based Scalable Lossless Compression of 3D Medical Image Data. IEEE Trans. Medical Imaging 28 (7) (2009)
Josna Rao, Ghassan Hamarneh, Rafeef Abugharbieh
Automatic Spatially-Adaptive Balancing of Energy Terms for Image Segmentation CoRR (2009)
Josna Rao, Ghassan Hamarneh, Rafeef Abugharbieh
Adaptive Contextual Energy Parameterization for Automated Image Segmentation. ISVC (1) (2009)
Ilker Hacihaliloglu, Rafeef Abugharbieh, Antony J. Hodgson, Robert Rohling
Automatic Data-Driven Parameterization for Phase-Based Bone Localization in US Using Log-Gabor Filters. ISVC (1) (2009)
Bernard Ng, Rafeef Abugharbieh, Martin J. McKeown
Discovering Sparse Functional Brain Networks Using Group Replicator Dynamics (GRD). IPMI (2009)
Albert Huang, Rafeef Abugharbieh, Roger C. Tam
A Hybrid Geometric-Statistical Deformable Model for Automated 3-D Segmentation in Brain MRI. IEEE Trans. Biomed. Eng. 56 (7) (2009)
Bernard Ng, Rafeef Abugharbieh, Martin J. McKeown
Detecting Maximal Directional Changes in Spatial fMRI Response Using Canonical Correlation Analysis. ISBI (2009)
Bernard Ng, Rafeef Abugharbieh, Xuemei Huang, Martin J. McKeown
Spatial Characterization of fMRI Activation Maps Using Invariant 3-D Moment Descriptors. IEEE Trans. Medical Imaging 28 (2) (2009)
Victor Sanchez, Rafeef Abugharbieh, Panos Nasiopoulos
3D scalable lossless compression of medical images based on global and local symmetries. ICIP (2009)
Victor Sanchez, Panos Nasiopoulos, Rafeef Abugharbieh
Novel Lossless fMRI Image Compression Based on Motion Compensation and Customized Entropy Coding. IEEE Trans. Inf. Technol. Biomed. 13 (4) (2009)
Bernard Ng, Rafeef Abugharbieh, Martin J. McKeown
Functional Segmentation of fMRI Data Using Adaptive Non-negative Sparse PCA (ANSPCA). MICCAI (1) (2009)
Bernard Ng, Rafeef Abugharbieh, Martin J. McKeown
Inferring functional connectivity using spatial modulation measures of fMRI signals within brain regions of interest. ISBI (2008)
Ilker Hacihaliloglu, Rafeef Abugharbieh, Antony J. Hodgson, Robert Rohling
Bone Segmentation and Fracture Detection in Ultrasound Using 3D Local Phase Features. MICCAI (1) (2008)
Ashish Uthama, Rafeef Abugharbieh, Samantha J. Palmer, Anthony Traboulsee, Martin J. McKeown
SPHARM-Based Spatial fMRI Characterization With Intersubject Anatomical Variability Reduction. IEEE J. Sel. Top. Signal Process. 2 (6) (2008)
Albert Huang, Rafeef Abugharbieh, Roger C. Tam
Image segmentation using an efficient rotationally invariant 3D region-based hidden Markov model. CVPR Workshops (2008)
Victor Sanchez, Panos Nasiopoulos, Rafeef Abugharbieh
Efficient 4D motion compensated lossless compression of dynamic volumetric medical image data. ICASSP (2008)
Ashish Uthama, Rafeef Abugharbieh, Samantha J. Palmer, Anthony Traboulsee, Martin J. McKeown
Invariant 3D spharm features for characterizing fMRI activations in ROIs while minimizing effects of intersubject anatomical variability. ISBI (2008)
Miranda Poon, Ghassan Hamarneh, Rafeef Abugharbieh
Efficient interactive 3D Livewire segmentation of complex objects with arbitrary topology. Comput. Medical Imaging Graph. 32 (8) (2008)
Victor Sanchez, Panos Nasiopoulos, Rafeef Abugharbieh
Efficient Lossless Compression of 4-D Medical Images Based on the Advanced Video Coding Scheme. IEEE Trans. Inf. Technol. Biomed. 12 (4) (2008)
Kelvin Poon, Ghassan Hamarneh, Rafeef Abugharbieh
Segmentation of complex objects with non-spherical topologies from volumetric medical images using 3D livewire. Medical Imaging: Image Processing (2007)
Rayan Saab, Özgür Yilmaz, Martin J. McKeown, Rafeef Abugharbieh
-Basis-Pursuit With q<<1. IEEE Trans. Signal Process. 55 (8) (2007)
Rupin Dalvi, Rafeef Abugharbieh, Mark Pickering, Jennie M. Scarvell, Paul N. Smith
Registration of 2D to 3D joint images using phase-based mutual information. Medical Imaging: Image Processing (2007)
Kelvin Poon, Ghassan Hamarneh, Rafeef Abugharbieh
Live-Vessel: Extending Livewire for Simultaneous Extraction of Optimal Medial and Boundary Paths in Vascular Images. MICCAI (2) (2007)
Bernard Ng, Rafeef Abugharbieh, Samantha J. Palmer, Martin J. McKeown
Characterizing Task-Related Temporal Dynamics of Spatial Activation Distributions in fMRI BOLD Signals. MICCAI (1) (2007)
Mohsen Abbaspour, Rafeef Abugharbieh, Mohua Podder, Scott J. Tebbutt
Fully automated analysis of multi-resolution four-channel micro-array genotyping data. Medical Imaging: Image Processing (2006)
Bernard Ng, Rafeef Abugharbieh, Xuemei Huang, Martin J. McKeown
Characterizing fMRI Activations within Regions of Interest (ROIs) Using 3D Moment Invariants. CVPR Workshops (2006)
Albert Huang, Rafeef Abugharbieh, Roger C. Tam, Anthony Traboulsee
Automatic MRI brain tissue segmentation using a hybrid statistical and geometric model. ISBI (2006)
Victor Sanchez, Panos Nasiopoulos, Rafeef Abugharbieh
Lossless Compression of 4D Medical Images using H.264/AVC. ICASSP (2) (2006)
Albert Huang, Rafeef Abugharbieh, Roger C. Tam, Anthony Traboulsee
Brain extraction using geodesic active contours. Medical Imaging: Image Processing (2006)
Sina Tootoonian, Rafeef Abugharbieh, Xuemei Huang, Martin J. McKeown
Shape vs. volume: invariant shape descriptors for 3D region of interest characterization in MRI. ISBI (2006)
Ghassan Hamarneh, Rafeef Abugharbieh, Tim McInerney
Medial Profiles for Modeling Deformation and Statistical Analysis of Shape and their Use in Medical Image Segmentation. Int. J. Shape Model. 10 (2) (2004)
Rafeef Abugharbieh, Ghassan Hamarneh, Tomas Gustavsson, Clemens Kaminski
Level Set Curve Matching and Particle Image Velocimetry for Resolving Chemistry and Turbulence Interactions in Propagating Flames. J. Math. Imaging Vis. 19 (3) (2003)