María J. Martín

Publication Activity (10 Years)

Years Active: 1994-2024
Publications (10 Years): 30

Top Topics

Search Algorithm

Similarity Metric

Optimization Method

Fault Tolerance

Top Venues

J. Supercomput.

Future Gener. Comput. Syst.

Publications

Alejandro Fernández-Fraga, Jorge González-Domínguez, María J. Martín
Applying dynamic balancing to improve the performance of MPI parallel genomics applications. SAC (2024)
Alejandro Fernández-Fraga, Jorge González-Domínguez, María J. Martín
PARamrfinder: detecting allele-specific DNA methylation on multicore clusters. J. Supercomput. 80 (10) (2024)
Alonso Rodríguez-Iglesias, María J. Martín, Juan Touriño
Clupiter: a Raspberry Pi mini-supercomputer for educational purposes. TrustCom (2023)
Christian Ponte-Fernández, Jorge González-Domínguez, María J. Martín
A SIMD algorithm for the detection of epistatic interactions of any order. CoRR (2022)
Borja González-Seoane, Christian Ponte-Fernández, Jorge González-Domínguez, María J. Martín
PyToxo: a Python tool for calculating penetrance tables of high-order epistasis models. BMC Bioinform. 23 (1) (2022)
Yannis Nevers, Tamsin E. M. Jones, Dushyanth Jyothi, Bethan Yates, Meritxell Ferret, Laura Portell-Silva, Laia Codó, Salvatore Cosentino, Marina Marcet-Houben, Anna Vlasova, Laetitia Poidevin, Arnaud Kress, Mark Hickman, Emma Persson, Ivana Pilizota, Cristina Guijarro-Clarke, Adrian M. Altenhoff, Elspeth A. Bruford, Christophe Dessimoz, Ingo Ebersberger, David M. Emms, Toni Gabaldón, Natasha Glover, Yanhui Hu, Wataru Iwasaki, Odile Lecompte, Benjamin Linard, María J. Martín, David S. Roos, Erik Sonhammer, Paul D. Thomas, David Thybert, Klaas Vandepoele, Salvador Capella-Gutiérrez, Asier Gonzalez-Uriarte, Javier Garrayo-Ventas, Dmitry Repchevsky, Vicky Sundesha, Erik L. L. Sonnhammer
The Quest for Orthologs orthology benchmark service in 2022. Nucleic Acids Res. 50 (W1) (2022)
Borja González-Seoane, Christian Ponte-Fernández, Jorge González-Domínguez, María J. Martín
Generating penetrance tables of high-order epistasis models with PyToxo. XoveTIC (2022)
Christian Ponte-Fernández, Jorge González-Domínguez, Antonio Carvajal-Rodríguez, María J. Martín
Evaluation of Existing Methods for High-Order Epistasis Detection. IEEE ACM Trans. Comput. Biol. Bioinform. 19 (2) (2022)
Christian Ponte-Fernández, Jorge González-Domínguez, María J. Martín
Fiuncho: a program for any-order epistasis detection in CPU clusters. J. Supercomput. 78 (13) (2022)
Christian Ponte-Fernández, Jorge González-Domínguez, María J. Martín
Fiuncho: a program for any-order epistasis detection in CPU clusters. CoRR (2022)
Christian Ponte-Fernández, Jorge González-Domínguez, María J. Martín
A SIMD algorithm for the detection of epistatic interactions of any order. Future Gener. Comput. Syst. 132 (2022)
Christian Ponte-Fernández, Jorge González-Domínguez, Antonio Carvajal-Rodríguez, María J. Martín
Toxo: a library for calculating penetrance tables of high-order epistasis models. BMC Bioinform. 21 (1) (2020)
Christian Ponte-Fernández, Jorge González-Domínguez, María J. Martín
Fast search of third-order epistatic interactions on CPU and GPU clusters. Int. J. High Perform. Comput. Appl. 34 (1) (2020)
Nuria Losada, Patricia González, María J. Martín, George Bosilca, Aurélien Bouteiller, Keita Teranishi
Fault tolerance of MPI applications in exascale systems: The ULFM solution. Future Gener. Comput. Syst. 106 (2020)
Nuria Losada, George Bosilca, Aurélien Bouteiller, Patricia González, María J. Martín
Local rollback for resilient MPI applications with application-level checkpointing and message logging. Future Gener. Comput. Syst. 91 (2019)
Uxía Casal, Jorge González-Domínguez, María J. Martín
Analysis of the Construction of Similarity Matrices on Multi-core and Many-Core Platforms Using Different Similarity Metrics. ICCS (1) (2019)
David R. Penas, Andrés Gómez, Basilio B. Fraguela, María J. Martín, Santiago Cerviño
Enhanced global optimization methods applied to complex fisheries stock assessment models. Appl. Soft Comput. 77 (2019)
Patricia González, Nuria Losada, María J. Martín
Insights into Application-level Solutions towards Resilient MPI Applications. HPCS (2018)
Jorge González-Domínguez, María J. Martín
MPIGeneNet: Parallel Calculation of Gene Co-Expression Networks on Multicore Clusters. IEEE ACM Trans. Comput. Biol. Bioinform. 15 (5) (2018)
Christian Ponte-Fernández, Jorge González-Domínguez, María J. Martín
Evaluation of OpenMP SIMD Directives on Xeon Phi Coprocessors. HPCS (2017)
Nuria Losada, Iván Cores, María J. Martín, Patricia González
Resilient MPI applications using an application-level checkpointing framework and ULFM. J. Supercomput. 73 (1) (2017)
Nuria Losada, María J. Martín, Patricia González
Assessing resilient versus stop-and-restart fault-tolerant solutions in MPI applications. J. Supercomput. 73 (1) (2017)
Nuria Losada, Basilio B. Fraguela, Patricia González, María J. Martín
A portable and adaptable fault tolerance solution for heterogeneous applications. J. Parallel Distributed Comput. 104 (2017)
Jorge González-Domínguez, Beatriz Remeseiro, María J. Martín
Parallel definition of tear film maps on distributed-memory clusters for the support of dry eye diagnosis. Comput. Methods Programs Biomed. 139 (2017)
Jorge González-Domínguez, María J. Martín
Fast Parallel Construction of Correlation Similarity Matrices for Gene Co-Expression Networks on Multicore Clusters. ICCS (2017)
Iván Cores, Monica Rodriguez, Patricia González, María J. Martín
Reducing the overhead of an MPI application-level migration approach. Parallel Comput. 54 (2016)
Nuria Losada, María J. Martín, Gabriel Rodríguez, Patricia González
Portable Application-level Checkpointing for Hybrid MPI-OpenMP Applications. ICCS (2016)
Sergio Vázquez, María J. Martín, Basilio B. Fraguela, Andrés Gómez, Aurelio Rodríguez, Bjarki Þór Elvarsson
Novel parallelization of simulated annealing and Hooke & Jeeves search algorithms for multicore systems with application to complex fisheries stock assessment models. J. Comput. Sci. 17 (2016)
Jorge González-Domínguez, Beatriz Remeseiro, María J. Martín
Acceleration of Tear Film Map Definition on Multicore Systems. ICCS (2016)
Iván Cores, Patricia González, Emmanuel Jeannot, María J. Martín, Gabriel Rodríguez
An Application-Level Solution for the Dynamic Reconfiguration of MPI Applications. VECPAR (2016)
Nuria Losada, María J. Martín, Gabriel Rodríguez, Patricia González
I/O Optimization in the Checkpointing of OpenMP Parallel Applications. PDP (2015)
Dana Petcu, Gabriel Iuhasz, Daniel Pop, Domenico Talia, Jesús Carretero, Radu Prodan, Thomas Fahringer, Ivan Grasso, Ramón Doallo, María J. Martín, Basilio B. Fraguela, Roman Trobec, Matjaz Depolli, Francisco Almeida Rodriguez, Francisco de Sande, Georges Da Costa, Jean-Marc Pierson, Stergios V. Anastasiadis, Aristides Bartzokas, Christos Lolis, Pedro Gonçalves, Fabrice Brito, Nick Brown
On Processing Extreme Data. Scalable Comput. Pract. Exp. 16 (4) (2015)
Monica Rodriguez, Iván Cores, Patricia González, María J. Martín
Improving an MPI Application-Level Migration Approach through Checkpoint File Splitting. SBAC-PAD (2014)
Jorge González-Domínguez, Evangelos Georganas, Yili Zheng, María J. Martín
Constructing Performance Models for Dense Linear Algebra Algorithms on Cray XE Systems. CoRR (2014)
Jorge González-Domínguez, Osni A. Marques, María J. Martín, Juan Touriño
A 2D algorithm with asymmetric workload for the UPC conjugate gradient method. J. Supercomput. 70 (2) (2014)
Iván Cores, Gabriel Rodríguez, María J. Martín, Patricia González
In-memory application-level checkpoint-based migration for MPI programs. J. Supercomput. 70 (2) (2014)
Iván Cores, Gabriel Rodríguez, Patricia González, María J. Martín
Failure Avoidance in MPI Applications Using an Application-Level Approach. Comput. J. 57 (1) (2014)
Alejandro Barrera, Ana Alastruey-Izquierdo, María J. Martín, Isabel Cuesta, Juan Antonio Vizcaíno
Analysis of the Protein Domain and Domain Architecture Content in Fungi and Its Application in the Search of New Antifungal Targets. PLoS Comput. Biol. 10 (7) (2014)
Nuria Losada, María J. Martín, Gabriel Rodríguez, Patricia González
Extending an Application-Level Checkpointing Tool to Provide Fault Tolerance Support to OpenMP Applications. J. Univers. Comput. Sci. 20 (9) (2014)
Iván Cores, Gabriel Rodríguez, María J. Martín, Patricia González, Roberto R. Osorio
Improving Scalability of Application-Level Checkpoint-Recovery by Reducing Checkpoint Sizes. New Gener. Comput. 31 (3) (2013)
Jorge González-Domínguez, Óscar García-López, Guillermo L. Taboada, María J. Martín, Juan Touriño
Performance evaluation of sparse matrix products in UPC. J. Supercomput. 64 (1) (2013)
Gabriel Rodríguez, María J. Martín, Patricia González, Juan Touriño, Ramon Doallo
Compiler-Assisted Checkpointing of Parallel Codes: The Cetus and LLVM Experience. Int. J. Parallel Program. 41 (6) (2013)
Jorge González-Domínguez, María J. Martín, Guillermo L. Taboada, Roberto R. Expósito, Juan Touriño
The Servet 3.0 benchmark suite: Characterization of network performance degradation. Comput. Electr. Eng. 39 (8) (2013)
Iván Cores, Gabriel Rodríguez, María J. Martín, Patricia González
Achieving Checkpointing Global Consistency Through a Hybrid Compile Time and Runtime Protocol. ICCS (2013)
Iván Cores, Gabriel Rodríguez, María J. Martín, Patricia González
Reducing Application-level Checkpoint File Sizes: Towards Scalable Fault Tolerance Solutions. ISPA (2012)
Jorge González-Domínguez, Osni A. Marques, María J. Martín, Guillermo L. Taboada, Juan Touriño
Design and Performance Issues of Cholesky and LU Solvers Using UPCBLAS. ISPA (2012)
Jorge González-Domínguez, Guillermo L. Taboada, Basilio B. Fraguela, María J. Martín, Juan Touriño
Automatic mapping of parallel applications on multicore architectures using the Servet benchmark suite. Comput. Electr. Eng. 38 (2) (2012)
Jorge González-Domínguez, María J. Martín, Guillermo L. Taboada, Juan Touriño, Ramon Doallo, Damián A. Mallón, Brian Wibecan
UPCBLAS: a library for parallel matrix computations in Unified Parallel C. Concurr. Comput. Pract. Exp. 24 (14) (2012)
Raúl Rengel, María J. Martín, Beatriz G. Vasallo
Supervised Coursework as a Way of Improving Motivation in the Learning of Digital Electronics. IEEE Trans. Educ. 55 (4) (2012)
Jorge González-Domínguez, María J. Martín, Guillermo L. Taboada, Juan Touriño
Dense Triangular Solvers on Multicore Clusters using UPC. ICCS (2011)
Gabriel Rodríguez, María J. Martín, Patricia González, Juan Touriño
Analysis of Performance-impacting Factors on Checkpointing Frameworks: The CPPC Case Study. Comput. J. 54 (11) (2011)
Iván Cores, Gabriel Rodríguez, Patricia González, María J. Martín
An Application Level Approach for Proactive Process Migration in MPI Applications. PDCAT (2011)
Iván Díaz, Gracia Fernández, Patricia González, María J. Martín, Juan Touriño
Extending the Globus Information Service with the Common Information Model. ISPA (2011)
Gabriel Rodríguez, María J. Martín, Patricia González, Juan Touriño, Ramon Doallo
CPPC: a compiler-assisted tool for portable checkpointing of message-passing applications. Concurr. Comput. Pract. Exp. 22 (6) (2010)
Iván Cores, Gabriel Rodríguez, María J. Martín, Patricia González
Achieving Fault Tolerance on Grids with the CPPC Framework and the GridWay Metascheduler. SBAC-PAD (2010)
Gabriel Rodríguez, Xoán C. Pardo, María J. Martín, Patricia González
Performance evaluation of an application-level checkpointing solution on grids. Future Gener. Comput. Syst. 26 (7) (2010)
Jorge González-Domínguez, Guillermo L. Taboada, Basilio B. Fraguela, María J. Martín, Juan Touriño
Servet: A benchmark suite for autotuning on multicore clusters. IPDPS (2010)
Xoán C. Pardo, María J. Martín, Jose Rodrigo Sanjurjo, Carlos V. Regueiro
Teaching Digital Systems in the Context of the New European Higher Education Area: A Practical Experience. IEEE Trans. Educ. 52 (4) (2009)
Jorge González-Domínguez, María J. Martín, Guillermo L. Taboada, Juan Touriño, Ramon Doallo, Andrés Gómez
A Parallel Numerical Library for UPC. Euro-Par (2009)
Gabriel Rodríguez, María J. Martín, Patricia González, Juan Touriño
A Heuristic Approach for the Automatic Insertion of Checkpoints in Message-Passing Codes. J. Univers. Comput. Sci. 15 (14) (2009)
Daniel Díaz, Xoán C. Pardo, María J. Martín, Patricia González
Application-Level Fault-Tolerance Solutions for Grid Computing. CCGRID (2008)
Iván Díaz, Gracia Fernández, María J. Martín, Patricia González, Juan Touriño
Integrating the common information model with MDS4. GRID (2008)
Gabriel Rodríguez, Xoán C. Pardo, María J. Martín, Patricia González, Daniel Díaz
A Fault Tolerance Solution for Sequential and MPI Applications on the Grid. Scalable Comput. Pract. Exp. 9 (2) (2008)
Gabriel Rodríguez, Patricia González, María J. Martín, Juan Touriño
Enhancing Fault-Tolerance of Large-Scale MPI Scientific Applications. PaCT (2007)
José Carlos Mouriño, María J. Martín, Patricia González, Ramon Doallo
Fault-tolerant solutions for a MPI compute intensive application. PDP (2007)
Daniel Díaz, Xoán C. Pardo, María J. Martín, Patricia González, Gabriel Rodríguez
CPPC-G: Fault-Tolerant Applications on the Grid. PPAM (2007)
Gabriel Rodríguez, María J. Martín, Patricia González, Juan Touriño
Controller/Precompiler for Portable Checkpointing. IEICE Trans. Inf. Syst. (2) (2006)
José Carlos Mouriño, María J. Martín, Patricia González, Ramon Doallo
High Performance Air Quality Simulation in the European CrossGrid Project. Comput. Artif. Intell. 25 (4) (2006)
José Carlos Mouriño, María J. Martín, Patricia González, Ramon Doallo
Dynamic Load-Balancing for the STEM-II Air Quality Model. ICCSA (1) (2006)
David E. Singh, María J. Martín, Francisco F. Rivera
Runtime characterisation of irregular accesses applied to parallelisation of irregular reductions. Int. J. Comput. Sci. Eng. 1 (1) (2005)
Juan Touriño, María J. Martín, Jacobo Tarrío, Manuel Arenaz
A Grid Portal for an Undergraduate Parallel Programming Course. IEEE Trans. Educ. 48 (3) (2005)
Marcos Boullón, José Carlos Cabaleiro, Ramon Doallo, Patricia González, Diego Rodríguez Martínez, María J. Martín, José Carlos Mouriño, Tomás F. Pena, Francisco F. Rivera
Modeling Execution Time of Selected Computation and Communication Kernels on Grids. EGC (2005)
María J. Martín, Marta Parada, Ramon Doallo
High Performance Air Pollution Simulation Using OpenMP. J. Supercomput. 28 (3) (2004)
José Carlos Mouriño, María J. Martín, Patricia González, Ramon Doallo
Air Pollution Modeling in the CrossGrid Project. International Conference on Computational Science (2004)
Jacobo Tarrío, Juan Touriño, María J. Martín, Patricia González, Ramon Doallo
A Grid Portal to Support High-Performance Scientific Computing on Distributed Resources. IEICE Trans. Inf. Syst. (7) (2004)
Patricia González, María J. Martín, José Carlos Mouriño, Ramon Doallo
Increasing the Throughput of Available Resources Using Management Tools Based on Grid Technologies. IPDPS (2003)
María J. Martín, David E. Singh, José Carlos Mouriño, Francisco F. Rivera, Ramon Doallo, Javier D. Bruguera
High performance air pollution modeling for a power plant environment. Parallel Comput. 29 (11-12) (2003)
José Carlos Mouriño, María J. Martín, Patricia González, Marcos Boullón, José Carlos Cabaleiro, Tomás F. Pena, Francisco F. Rivera, Ramon Doallo
A Grid-Enabled Air Quality Simulation. European Across Grids Conference (2003)
David E. Singh, María J. Martín, Francisco F. Rivera
Increasing the Parallelism of Irregular Loops with Dependences. Euro-Par (2003)
David E. Singh, María J. Martín, Francisco F. Rivera
Automatic Generation of Optimized Parallel Codes for N-body Simulations. PPAM (2003)
María J. Martín, David E. Singh, Juan Touriño, Francisco F. Rivera
Improving Locality in the Parallelization of Doacross Loops (Research Note). Euro-Par (2002)
José Carlos Mouriño, Patricia González, María J. Martín, Ramon Doallo
A Cluster-Based Solution for a High Performance Air Quality Simulation. PARA (2002)
Marta Parada, María J. Martín, Ramon Doallo
High Performance Air Pollution Simulation Using OpenMP. ICPP Workshops (2002)
María J. Martín, David E. Singh, Juan Touriño, Francisco F. Rivera
Exploiting Locality in the Run-Time Parallelization of Irregular Loops. ICPP (2002)
David E. Singh, Francisco F. Rivera, María J. Martín
Run-Time Characterization of Irregular Accesses Applied to Parallelization of Irregular Reductions. ICPP Workshops (2001)
José Carlos Mouriño, María J. Martín, Ramon Doallo, David E. Singh, Francisco F. Rivera, Javier D. Bruguera
The STEM-II Air Quality Model on a Distributed Memory System. ICPP Workshops (2001)
S. Barraud, P. Dollfus, S. Galdin, Raúl Rengel, María J. Martín, J. E. Velázquez
An lonised-impurity Scattering Model for 3D Monte Carlo Device Simulation with Discrete Impurity Distribution. VLSI Design 2001 (1) (2001)
José Carlos Mouriño, David E. Singh, María J. Martín, J. M. Eiroa, Francisco F. Rivera, Ramon Doallo, Javier D. Bruguera
Parallelization of the STEM-II Air Quality Model. HPCN Europe (2001)
David E. Singh, María J. Martín, Francisco F. Rivera
The Envelope of a Digital Curve Based on Dominant Points. DGCI (2000)
María J. Martín, Inmaculada Pardines, Francisco F. Rivera
Scheduling of Algorithms Based on Elimination Trees on NUMA Systems. Euro-Par (1999)
María J. Martín, Inmaculada Pardines, Francisco F. Rivera
Left-looking strategy for the sparse modified Cholesky factorization on NUMA multiprocessors. PARCO (1999)
Inmaculada Pardines, María J. Martín, Margarita Amor, Francisco F. Rivera
Static Mapping of the Multifrontal Method Applied to the Modified Cholesky Factorization for Sparse Matrices. PARCO (1997)
María J. Martín, Francisco F. Rivera
Modelling an Asynchronous Parallel Modified Cholesky Factorization for Sparse Matrices. Euro-PDS (1997)
Vicente Blanco Pérez, María J. Martín, Dora Blanco Heras, Oscar G. Plata, Francisco F. Rivera
Image Template Matching on Distributed Memory and Vector Multiprocessors. PARCO (1995)
Margarita Amor, María J. Martín, Dora Blanco Heras, Oscar G. Plata, Francisco F. Rivera, Francisco Argüello
Vectorization of the Radix r Self-Sorting FFT. CONPAR (1994)