Lei Xing

Publication Activity (10 Years)

Years Active: 2011-2024
Publications (10 Years): 82

Top Topics

Medical Image Segmentation

Computed Tomography

Top Venues

IEEE Trans. Medical Imaging

Comput. Biol. Medicine

IEEE Trans. Biomed. Eng.

Publications

Zixia Zhou, Md Tauhidul Islam, Lei Xing
Multibranch CNN With MLP-Mixer-Based Feature Exploration for High-Performance Disease Diagnosis. IEEE Trans. Neural Networks Learn. Syst. 35 (6) (2024)
Sheng Liu, Oscar Pastor-Serrano, Yizheng Chen, Matthew Gopaulchan, Weixing Liang, Mark Buyyounouski, Erqi Pollom, Quynh-Thu Le, Michael Gensheimer, Peng Dong, Yong Yang, James Zou, Lei Xing
Automated radiotherapy treatment planning guided by GPT-4Vision. CoRR (2024)
Liyue Shen, John M. Pauly, Lei Xing
NeRP: Implicit Neural Representation Learning With Prior Embedding for Sparsely Sampled Image Reconstruction. IEEE Trans. Neural Networks Learn. Syst. 35 (1) (2024)
Jieneng Chen, Jieru Mei, Xianhang Li, Yongyi Lu, Qihang Yu, Qingyue Wei, Xiangde Luo, Yutong Xie, Ehsan Adeli, Yan Wang, Matthew P. Lungren, Shaoting Zhang, Lei Xing, Le Lu, Alan L. Yuille, Yuyin Zhou
TransUNet: Rethinking the U-Net architecture design for medical image segmentation through the lens of transformers. Medical Image Anal. 97 (2024)
Qingyue Wei, Md Tauhidul Islam, Yuyin Zhou, Lei Xing
Self-supervised deep learning of gene-gene interactions for improved gene expression recovery. Briefings Bioinform. 25 (2) (2024)
Md Tauhidul Islam, Lei Xing
Deciphering the Feature Representation of Deep Neural Networks for High-Performance AI. IEEE Trans. Pattern Anal. Mach. Intell. 46 (8) (2024)
Xiao Jia, Yutian Shen, Jianhong Yang, Ran Song, Wei Zhang, Max Q.-H. Meng, Joseph C. Liao, Lei Xing
PolypMixNet: Enhancing semi-supervised polyp segmentation with polyp-aware augmentation. Comput. Biol. Medicine 170 (2024)
Praveenbalaji Rajendran, Yong Yang, Thomas R. Niedermayr, Michael Gensheimer, Beth M. Beadle, Quynh-Thu Le, Lei Xing, Xianjin Dai
Large Language Model-Augmented Auto-Delineation of Treatment Target Volume in Radiation Therapy. CoRR (2024)
Shengtian Sang, Yuyin Zhou, Md Tauhidul Islam, Lei Xing
Small-Object Sensitive Segmentation Using Across Feature Map Attention. IEEE Trans. Pattern Anal. Mach. Intell. 45 (5) (2023)
Qingyue Wei, Lequan Yu, Xianhang Li, Wei Shao, Cihang Xie, Lei Xing, Yuyin Zhou
Consistency-guided Meta-Learning for Bootstrapping Semi-Supervised Medical Image Segmentation. CoRR (2023)
Rui Yan, Liangqiong Qu, Qingyue Wei, Shih-Cheng Huang, Liyue Shen, Daniel L. Rubin, Lei Xing, Yuyin Zhou
Label-Efficient Self-Supervised Federated Learning for Tackling Data Heterogeneity in Medical Imaging. IEEE Trans. Medical Imaging 42 (7) (2023)
Bowen Song, Liyue Shen, Lei Xing
PINER: Prior-informed Implicit Neural Representation Learning for Test-time Adaptation in Sparse-view CT Reconstruction. WACV (2023)
Yizheng Chen, Lequan Yu, Jen-Yeu Wang, Neil Panjwani, Jean-Pierre Obeid, Wu Liu, Lianli Liu, Nataliya Kovalchuk, Michael Francis Gensheimer, Lucas Kas Vitzthum, Beth M. Beadle, Daniel T. Chang, Quynh-Thu Le, Bin Han, Lei Xing
Adaptive Region-Specific Loss for Improved Medical Image Segmentation. IEEE Trans. Pattern Anal. Mach. Intell. 45 (11) (2023)
Md Tauhidul Islam, Lei Xing
Leveraging cell-cell similarity for high-performance spatial and temporal cellular mappings from gene expression data. Patterns 4 (10) (2023)
Varun Vasudevan, Maxime Bassenne, Md Tauhidul Islam, Lei Xing
Image classification using graph neural network and multiscale wavelet superpixels. Pattern Recognit. Lett. 166 (2023)
Jieneng Chen, Jieru Mei, Xianhang Li, Yongyi Lu, Qihang Yu, Qingyue Wei, Xiangde Luo, Yutong Xie, Ehsan Adeli, Yan Wang, Matthew P. Lungren, Lei Xing, Le Lu, Alan L. Yuille, Yuyin Zhou
3D TransUNet: Advancing Medical Image Segmentation through Vision Transformers. CoRR (2023)
Qingyue Wei, Lequan Yu, Xianhang Li, Wei Shao, Cihang Xie, Lei Xing, Yuyin Zhou
Consistency-Guided Meta-learning for Bootstrapping Semi-supervised Medical Image Segmentation. MICCAI (4) (2023)
Yang Song, Liyue Shen, Lei Xing, Stefano Ermon
Solving Inverse Problems in Medical Imaging with Score-Based Generative Models. ICLR (2022)
Rui Yan, Liangqiong Qu, Qingyue Wei, Shih-Cheng Huang, Liyue Shen, Daniel L. Rubin, Lei Xing, Yuyin Zhou
Label-Efficient Self-Supervised Federated Learning for Tackling Data Heterogeneity in Medical Imaging. CoRR (2022)
Anqi Fu, Lei Xing, Stephen P. Boyd
Operator splitting for adaptive radiation therapy with nonlinear health dynamics. Optim. Methods Softw. 37 (6) (2022)
Charles W. Huang, Varun Vasudevan, Oscar Pastor-Serrano, Md Tauhidul Islam, Yusuke Nomura, Yong Yang, Lei Xing
Learning Treatment Plan Representations for Content Based Image Retrieval. CoRR (2022)
Okyaz Eminaga, T. Jessie Ge, Eugene Shkolyar, Mark A. Laurie, Timothy J. Lee, Lukas Hockman, Xiao Jia, Lei Xing, Joseph C. Liao
An Efficient Framework for Video Documentation of Bladder Lesions for Cystoscopy: A Proof-of-Concept Study. J. Medical Syst. 46 (11) (2022)
Liyue Shen, Lequan Yu, Wei Zhao, John M. Pauly, Lei Xing
Novel-view X-ray projection synthesis through geometry-integrated deep learning. Medical Image Anal. 77 (2022)
Xiaokun Liang, Maxime Bassenne, Dimitre H. Hristov, Md Tauhidul Islam, Wei Zhao, Mengyu Jia, Zhicheng Zhang, Michael Gensheimer, Beth Beadle, Quynh Le, Lei Xing
Human-level comparable control volume mapping with a deep unsupervised-learning model for image-guided radiation therapy. Comput. Biol. Medicine 141 (2022)
Liyue Shen, Wei Zhao, Dante Capaldi, John M. Pauly, Lei Xing
A geometry-informed deep learning framework for ultra-sparse 3D tomographic image reconstruction. Comput. Biol. Medicine 148 (2022)
Varun Vasudevan, Maxime Bassenne, Md Tauhidul Islam, Lei Xing
Image Classification using Graph Neural Network and Multiscale Wavelet Superpixels. CoRR (2022)
Junfei Xiao, Lequan Yu, Zongwei Zhou, Yutong Bai, Lei Xing, Alan L. Yuille, Yuyin Zhou
CateNorm: Categorical Normalization for Robust Medical Image Segmentation. DART@MICCAI (2022)
Xiaomeng Li, Xiaowei Hu, Xiaojuan Qi, Lequan Yu, Wei Zhao, Pheng-Ann Heng, Lei Xing
Rotation-Oriented Collaborative Self-Supervised Learning for Retinal Disease Diagnosis. IEEE Trans. Medical Imaging 40 (9) (2021)
Charles W. Huang, Yong Yang, Neil Panjwani, Stephen P. Boyd, Lei Xing
Pareto Optimal Projection Search (POPS): Automated Radiation Therapy Treatment Planning by Direct Search of the Pareto Surface. IEEE Trans. Biomed. Eng. 68 (10) (2021)
Anqi Fu, Lei Xing, Stephen Boyd
Operator Splitting for Adaptive Radiation Therapy with Nonlinear Health Dynamics. CoRR (2021)
Md Tauhidul Islam, Lei Xing
Geometry and statistics-preserving manifold embedding for nonlinear dimensionality reduction. Pattern Recognit. Lett. 151 (2021)
Zhicheng Zhang, Lequan Yu, Xiaokun Liang, Wei Zhao, Lei Xing
TransCT: Dual-Path Transformer for Low Dose Computed Tomography. MICCAI (6) (2021)
Liyue Shen, Wei Zhao, Dante Capaldi, John M. Pauly, Lei Xing
A Geometry-Informed Deep Learning Framework for Ultra-Sparse 3D Tomographic Image Reconstruction. CoRR (2021)
Hyunseok Seo, Lequan Yu, Hongyi Ren, Xiaomeng Li, Liyue Shen, Lei Xing
Deep Neural Network With Consistency Regularization of Multi-Output Channels for Improved Tumor Detection and Delineation. IEEE Trans. Medical Imaging 40 (12) (2021)
Lequan Yu, Zhicheng Zhang, Xiaomeng Li, Lei Xing
Deep Sinogram Completion With Image Prior for Metal Artifact Reduction in CT Images. IEEE Trans. Medical Imaging 40 (1) (2021)
Xiaomeng Li, Lequan Yu, Hao Chen, Chi-Wing Fu, Lei Xing, Pheng-Ann Heng
Transformation-Consistent Self-Ensembling Model for Semisupervised Medical Image Segmentation. IEEE Trans. Neural Networks Learn. Syst. 32 (2) (2021)
Tianling Lyu, Wei Zhao, Yinsu Zhu, Zhan Wu, Yikun Zhang, Yang Chen, Limin Luo, Shuo Li, Lei Xing
Estimating dual-energy CT imaging from single-energy CT data with material decomposition convolutional neural network. Medical Image Anal. 70 (2021)
Lequan Yu, Zhicheng Zhang, Xiaomeng Li, Hongyi Ren, Wei Zhao, Lei Xing
Metal Artifact Reduction in 2D CT Images with Self-supervised Cross-domain Learning. CoRR (2021)
Liyue Shen, Wentao Zhu, Xiaosong Wang, Lei Xing, John M. Pauly, Baris Turkbey, Stephanie Anne Harmon, Thomas Hogue Sanford, Sherif Mehralivand, Peter L. Choyke, Bradford J. Wood, Daguang Xu
Multi-Domain Image Completion for Random Missing Input Data. IEEE Trans. Medical Imaging 40 (4) (2021)
Yang Song, Liyue Shen, Lei Xing, Stefano Ermon
Solving Inverse Problems in Medical Imaging with Score-Based Generative Models. CoRR (2021)
Liyue Shen, John M. Pauly, Lei Xing
NeRP: Implicit Neural Representation Learning with Prior Embedding for Sparsely Sampled Image Reconstruction. CoRR (2021)
Hyunseok Seo, Maxime Bassenne, Lei Xing
Closing the Gap Between Deep Neural Network Modeling and Biomedical Decision-Making Metrics in Segmentation via Adaptive Loss Functions. IEEE Trans. Medical Imaging 40 (2) (2021)
Yixuan Yuan, Wenjian Qin, Bulat Ibragimov, Guanglei Zhang, Bin Han, Max Q.-H. Meng, Lei Xing
Densely Connected Neural Network With Unbalanced Discriminant and Category Sensitive Constraints for Polyp Recognition. IEEE Trans Autom. Sci. Eng. 17 (2) (2020)
Hui Liu, Haiou Wang, Yan Wu, Lei Xing
Superpixel Region Merging Based on Deep Network for Medical Image Segmentation. ACM Trans. Intell. Syst. Technol. 11 (4) (2020)
Wei Zhao, Tianling Lv, Rena Lee, Yang Chen, Lei Xing
Obtaining Dual-Energy Computed Tomography (CT) Information from a Single-Energy CT Image forQuantitative Imaging Analysis of Living Subjects by Using Deep Learning. PSB (2020)
Yan Wu, Yajun Ma, Jiang Du, Lei Xing
Deciphering tissue relaxation parameters from a single MR image using deep learning. Medical Imaging: Computer-Aided Diagnosis (2020)
Hyunseok Seo, Charles W. Huang, Maxime Bassenne, Ruoxiu Xiao, Lei Xing
Modified U-Net (mU-Net) With Incorporation of Object-Dependent High Level Features for Improved Liver and Liver-Tumor Segmentation in CT Images. IEEE Trans. Medical Imaging 39 (5) (2020)
Xiao Jia, Xiaochun Mai, Yi Cui, Yixuan Yuan, Xiaohan Xing, Hyunseok Seo, Lei Xing, Max Q.-H. Meng
Automatic Polyp Recognition in Colonoscopy Images Using Deep Learning and Two-Stage Pyramidal Feature Prediction. IEEE Trans Autom. Sci. Eng. 17 (3) (2020)
Xiaomeng Li, Mengyu Jia, Md Tauhidul Islam, Lequan Yu, Lei Xing
Self-supervised Feature Learning via Exploiting Multi-modal Data for Retinal Disease Diagnosis. CoRR (2020)
Michael B. Sano, Ross Aaron Petrella, Jacob D. Kaufman, Christopher C. Fesmire, Lei Xing, David Gerber, Callie A. Fogle
Electro-thermal therapy: Microsecond duration pulsed electric field tissue ablation with dynamic temperature control algorithms. Comput. Biol. Medicine 121 (2020)
Bulat Ibragimov, Diego A. S. Toesca, Daniel T. Chang, Yixuan Yuan, Albert C. Koong, Lei Xing
Automated hepatobiliary toxicity prediction after liver stereotactic body radiation therapy with deep learning-based portal vein segmentation. Neurocomputing 392 (2020)
Xiaomeng Li, Mengyu Jia, Md Tauhidul Islam, Lequan Yu, Lei Xing
Self-Supervised Feature Learning via Exploiting Multi-Modal Data for Retinal Disease Diagnosis. IEEE Trans. Medical Imaging 39 (12) (2020)
Xiao Jia, Xiaohan Xing, Yixuan Yuan, Lei Xing, Max Q.-H. Meng
Wireless Capsule Endoscopy: A New Tool for Cancer Screening in the Colon With Deep-Learning-Based Polyp Recognition. Proc. IEEE 108 (1) (2020)
Xiaomeng Li, Lequan Yu, Yueming Jin, Chi-Wing Fu, Lei Xing, Pheng-Ann Heng
Difficulty-Aware Meta-learning for Rare Disease Diagnosis. MICCAI (1) (2020)
Liyue Shen, Wentao Zhu, Xiaosong Wang, Lei Xing, John M. Pauly, Baris Turkbey, Stephanie Anne Harmon, Thomas Hogue Sanford, Sherif Mehralivand, Peter L. Choyke, Bradford J. Wood, Daguang Xu
Multi-Domain Image Completion for Random Missing Input Data. CoRR (2020)
Ivan Olefir, Stratis Tzoumas, Courtney Restivo, Pouyan Mohajerani, Lei Xing, Vasilis Ntziachristos
Deep Learning-Based Spectral Unmixing for Optoacoustic Imaging of Tissue Oxygen Saturation. IEEE Trans. Medical Imaging 39 (11) (2020)
Masoud Badiei Khuzani, Varun Vasudevan, Hongyi Ren, Lei Xing
Stochastic Primal-Dual Method for Learning Mixture Policies in Markov Decision Processes. CDC (2019)
Masoud Badiei Khuzani, Hongyi Ren, Varun Vasudevan, Lei Xing
Multiple Kernel Learning from $U$-Statistics of Empirical Measures in the Feature Space. CoRR (2019)
Masoud Badiei Khuzani, Liyue Shen, Shahin Shahrampour, Lei Xing
A Mean-Field Theory for Kernel Alignment with Random Features in Generative Adversarial Networks. CoRR (2019)
Bulat Ibragimov, Diego A. S. Toesca, Yixuan Yuan, Albert C. Koong, Daniel T. Chang, Lei Xing
Neural Networks for Deep Radiotherapy Dose Analysis and Prediction of Liver SBRT Outcomes. IEEE J. Biomed. Health Informatics 23 (5) (2019)
Masoud Badiei Khuzani, Varun Vasudevan, Hongyi Ren, Lei Xing
On Sample Complexity of Projection-Free Primal-Dual Methods for Learning Mixture Policies in Markov Decision Processes. CoRR (2019)
Hyunseok Seo, Charles W. Huang, Maxime Bassenne, Ruoxiu Xiao, Lei Xing
Modified U-Net (mU-Net) with Incorporation of Object-Dependent High Level Features for Improved Liver and Liver-Tumor Segmentation in CT Images. CoRR (2019)
Morteza Mardani, Enhao Gong, Joseph Y. Cheng, Shreyas S. Vasanawala, Greg Zaharchuk, Lei Xing, John M. Pauly
Deep Generative Adversarial Neural Networks for Compressive Sensing MRI. IEEE Trans. Medical Imaging 38 (1) (2019)
Hyunseok Seo, Masoud Badiei Khuzani, Varun Vasudevan, Charles W. Huang, Hongyi Ren, Ruoxiu Xiao, Xiao Jia, Lei Xing
Machine Learning Techniques for Biomedical Image Segmentation: An Overview of Technical Aspects and Introduction to State-of-Art Applications. CoRR (2019)
Baris Ungun, Lei Xing, Stephen P. Boyd
Real-Time Radiation Treatment Planning with Optimality Guarantees via Cluster and Bound Methods. INFORMS J. Comput. 31 (3) (2019)
Yixuan Yuan, Wenjian Qin, Xiaoqing Guo, Mark Buyyounouski, Steve Hancock, Bin Han, Lei Xing
Prostate Segmentation with Encoder-Decoder Densely Connected Convolutional Network (Ed-Densenet). ISBI (2019)
Wei Zhao, Liyue Shen, Yan Wu, Bin Han, Yong Yang, Lei Xing
Automatic marker-free target positioning and tracking for image-guided radiotherapy and interventions. Medical Imaging: Image-Guided Procedures (2019)
Wei Zhao, Bin Han, Yong Yang, Mark Buyyounouski, Steven L. Hancock, Hilary Bagshaw, Lei Xing
Toward Markerless Image-Guided Radiotherapy Using Deep Learning for Prostate Cancer. AIRT@MICCAI (2019)
Yan Wu, Yajun Ma, Jing Liu, Jiang Du, Lei Xing
Self-attention convolutional neural network for improved MR image reconstruction. Inf. Sci. 490 (2019)
Guanglei Zhang, Stratis Tzoumas, Kai Cheng, Fei Liu, Jie Liu, Jianwen Luo, Jing Bai, Lei Xing
Generalized Adaptive Gaussian Markov Random Field for X-Ray Luminescence Computed Tomography. IEEE Trans. Biomed. Eng. 65 (9) (2018)
Hui Liu, Jun Xu, Yan Wu, Qiang Guo, Bulat Ibragimov, Lei Xing
Learning deconvolutional deep neural network for high resolution medical image reconstruction. Inf. Sci. 468 (2018)
Bulat Ibragimov, Diego A. S. Toesca, Yixuan Yuan, Albert C. Koong, Daniel T. Chang, Lei Xing
Deep 3D Dose Analysis for Prediction of Outcomes After Liver Stereotactic Body Radiation Therapy. MICCAI (2) (2018)
Michael B. Sano, Matthew R. DeWitt, Stephanie D. Teeter, Lei Xing
Optimization of a single insertion electrode array for the creation of clinically relevant ablations using high-frequency irreversible electroporation. Comput. Biol. Medicine 95 (2018)
Yixuan Yuan, Wenjian Qin, Bulat Ibragimov, Bin Han, Lei Xing
RIIS-DenseNet: Rotation-Invariant and Image Similarity Constrained Densely Connected Convolutional Network for Polyp Detection. MICCAI (2) (2018)
Stratis Tzoumas, Don Vernekohl, Lei Xing
Coded-Aperture Compressed Sensing X-Ray Luminescence Tomography. IEEE Trans. Biomed. Eng. 65 (8) (2018)
Masoud Zarepisheh, Lei Xing, Yinyu Ye
A computation study on an integrated alternating direction method of multipliers for large scale optimization. Optim. Lett. 12 (1) (2018)
Michael B. Sano, Olga Volotskova, Lei Xing
Treatment of Cancer In Vitro Using Radiation and High-Frequency Bursts of Submicrosecond Electrical Pulses. IEEE Trans. Biomed. Eng. 65 (4) (2018)
Morteza Mardani, Enhao Gong, Joseph Y. Cheng, John M. Pauly, Lei Xing
Recurrent generative adversarial neural networks for compressive imaging. CAMSAP (2017)
Yixuan Yuan, Max Q.-H. Meng, Wenjian Qin, Lei Xing
Liver Lesion Detection Based on Two-Stage Saliency Model with Modified Sparse Autoencoder. MICCAI (3) (2017)
Guanglei Zhang, Fei Liu, Jie Liu, Jianwen Luo, Yaoqin Xie, Jing Bai, Lei Xing
Cone Beam X-ray Luminescence Computed Tomography Based on Bayesian Method. IEEE Trans. Medical Imaging 36 (1) (2017)
Bulat Ibragimov, Robert Korez, Bostjan Likar, Franjo Pernus, Lei Xing, Tomaz Vrtovec
Segmentation of Pathological Structures by Landmark-Assisted Deformable Models. IEEE Trans. Medical Imaging 36 (7) (2017)
Youngjun Kim, Yong Hum Na, Lei Xing, Rena Lee, Se Hyung Park
Automatic deformable surface registration for medical applications by radial basis function-based robust point-matching. Comput. Biol. Medicine 77 (2016)
Moiz Ahmad, Magdalena Bazalova-Carter, Rebecca Fahrig, Lei Xing
Optimized Detector Angular Configuration Increases the Sensitivity of X-ray Fluorescence Computed Tomography (XFCT). IEEE Trans. Medical Imaging 34 (5) (2015)
Moiz Ahmad, Guillem Pratx, Magdalena Bazalova, Lei Xing
X-Ray Luminescence and X-Ray Fluorescence Computed Tomography: New Molecular Imaging Modalities. IEEE Access 2 (2014)
Moiz Ahmad, Magdalena Bazalova, Liangzhong Xiang, Lei Xing
Order of Magnitude Sensitivity Increase in X-ray Fluorescence Computed Tomography (XFCT) Imaging With an Optimized Spectro-Spatial Detector Configuration: Theory and Simulation. IEEE Trans. Medical Imaging 33 (5) (2014)
Yu Kuang, Guillem Pratx, Magdalena Bazalova, Bowen Meng, Jianguo Qian, Lei Xing
First Demonstration of Multiplexed X-Ray Fluorescence Computed Tomography (XFCT) Imaging. IEEE Trans. Medical Imaging 32 (2) (2013)
Magdalena Bazalova, Yu Kuang, Guillem Pratx, Lei Xing
Investigation of X-ray Fluorescence Computed Tomography (XFCT) and K-Edge Imaging. IEEE Trans. Medical Imaging 31 (8) (2012)
Guanglei Xiong, Lei Xing
Automated Detection of Junctions Structures and Tracking of Their Trajectories in 4D Images. IPMI (2011)