Shaoting Zhang

Publication Activity (10 Years)

Years Active: 2022-2024
Publications (10 Years): 57

Top Topics

Medical Image Segmentation

Image Segmentation

Top Venues

Medical Image Anal.

IEEE Trans. Medical Imaging

Publications

Zhongzhen Huang, Kui Xue, Yongqi Fan, Linjie Mu, Ruoyu Liu, Tong Ruan, Shaoting Zhang, Xiaofan Zhang
Tool Calling: Enhancing Medication Consultation via Retrieval-Augmented Large Language Models. CoRR (2024)
Jiangshan Lu, Ran Gu, Wenjun Liao, Shichuan Zhang, Huijun Yu, Shaoting Zhang, Guotai Wang
Domain composition and attention network trained with synthesized unlabeled images for generalizable medical image segmentation. Neurocomputing 599 (2024)
Mianxin Liu, Jinru Ding, Jie Xu, Weiguo Hu, Xiaoyang Li, Lifeng Zhu, Zhian Bai, Xiaoming Shi, Benyou Wang, Haitao Song, Pengfei Liu, Xiaofan Zhang, Shanshan Wang, Kang Li, Haofen Wang, Tong Ruan, Xuanjing Huang, Xin Sun, Shaoting Zhang
MedBench: A Comprehensive, Standardized, and Reliable Benchmarking System for Evaluating Chinese Medical Large Language Models. CoRR (2024)
Jiawen Xie, Shaoting Zhang, Xiaofan Zhang
GECSum: Generative Evaluation-Driven Sequence Level Contrastive Learning for Abstractive Summarization. LREC/COLING (2024)
Xiangde Luo, Zihan Li, Shaoting Zhang, Wenjun Liao, Guotai Wang
Rethinking Abdominal Organ Segmentation (RAOS) in the clinical scenario: A robustness evaluation benchmark with challenging cases. CoRR (2024)
Yangfan Ni, Geng Chen, Zhan Feng, Heng Cui, Dimitris N. Metaxas, Shaoting Zhang, Wentao Zhu
DA-Tran: Multiphase liver tumor segmentation with a domain-adaptive transformer network. Pattern Recognit. 149 (2024)
Meng Han, Xiangde Luo, Xiangjiang Xie, Wenjun Liao, Shichuan Zhang, Tao Song, Guotai Wang, Shaoting Zhang
DMSPS: Dynamically mixed soft pseudo-label supervision for scribble-supervised medical image segmentation. Medical Image Anal. 97 (2024)
Wentao Zhu, Yuan Jin, Gege Ma, Geng Chen, Jan Egger, Shaoting Zhang, Dimitris N. Metaxas
Classification of lung cancer subtypes on CT images with synthetic pathological priors. Medical Image Anal. 95 (2024)
Jiaxuan Lu, Fang Yan, Xiaofan Zhang, Yue Gao, Shaoting Zhang
PathoTune: Adapting Visual Foundation Model to Pathological Specialists. CoRR (2024)
Zhongzhen Huang, Linda Wei, Shaoting Zhang, Xiaofan Zhang
Modality-Aware and Shift Mixer for Multi-modal Brain Tumor Segmentation. CoRR (2024)
Jieneng Chen, Jieru Mei, Xianhang Li, Yongyi Lu, Qihang Yu, Qingyue Wei, Xiangde Luo, Yutong Xie, Ehsan Adeli, Yan Wang, Matthew P. Lungren, Shaoting Zhang, Lei Xing, Le Lu, Alan L. Yuille, Yuyin Zhou
TransUNet: Rethinking the U-Net architecture design for medical image segmentation through the lens of transformers. Medical Image Anal. 97 (2024)
Xiaoming Shi, Zeming Liu, Li Du, Yuxuan Wang, Hongru Wang, Yuhang Guo, Tong Ruan, Jie Xu, Shaoting Zhang
Medical Dialogue: A Survey of Categories, Methods, Evaluation and Challenges. CoRR (2024)
Yuan Jin, Gege Ma, Geng Chen, Tianling Lyu, Jan Egger, Junhui Lyu, Shaoting Zhang, Wentao Zhu
CC-DCNet: Dynamic Convolutional Neural Network with Contrastive Constraints for Identifying Lung Cancer Subtypes on Multi-modality Images. CoRR (2024)
Lingyun Wu, Xiang Gao, Zhiqiang Hu, Shaoting Zhang
Pattern-Aware Transformer: Hierarchical Pattern Propagation in Sequential Medical Images. IEEE Trans. Medical Imaging 43 (1) (2024)
Xi Chen, MingKe You, Li Wang, WeiZhi Liu, Yu Fu, Jie Xu, Shaoting Zhang, Gang Chen, Kang Li, Jian Li
Evaluating and Enhancing Large Language Models Performance in Domain-specific Medicine: Osteoarthritis Management with DocOA. CoRR (2024)
Zhongzhen Huang, Yankai Jiang, Rongzhao Zhang, Shaoting Zhang, Xiaofan Zhang
CAT: Coordinating Anatomical-Textual Prompts for Multi-Organ and Tumor Segmentation. CoRR (2024)
Jianghao Wu, Dong Guo, Guotai Wang, Qiang Yue, Huijun Yu, Kang Li, Shaoting Zhang
FPL+: Filtered Pseudo Label-based Unsupervised Cross-Modality Adaptation for 3D Medical Image Segmentation. CoRR (2024)
Wenhui Lei, Qi Su, Tianyu Jiang, Ran Gu, Na Wang, Xinglong Liu, Guotai Wang, Xiaofan Zhang, Shaoting Zhang
One-Shot Weakly-Supervised Segmentation in 3D Medical Images. IEEE Trans. Medical Imaging 43 (1) (2024)
Xiaosong Wang, Xiaofan Zhang, Guotai Wang, Junjun He, Zhongyu Li, Wentao Zhu, Yi Guo, Qi Dou, Xiaoxiao Li, Dequan Wang, Liang Hong, Qicheng Lao, Tong Ruan, Yukun Zhou, Yixue Li, Jie Zhao, Kang Li, Xin Sun, Lifeng Zhu, Shaoting Zhang
OpenMEDLab: An Open-source Platform for Multi-modality Foundation Models in Medicine. CoRR (2024)
Yongqi Fan, Hongli Sun, Kui Xue, Xiaofan Zhang, Shaoting Zhang, Tong Ruan
MedOdyssey: A Medical Domain Benchmark for Long Context Evaluation Up to 200K Tokens. CoRR (2024)
Yunkun Zhang, Jin Gao, Zheling Tan, Lingfeng Zhou, Kexin Ding, Mu Zhou, Shaoting Zhang, Dequan Wang
Data-Centric Foundation Models in Computational Healthcare: A Survey. CoRR (2024)
Zhen Huang, Zengzhi Wang, Shijie Xia, Xuefeng Li, Haoyang Zou, Ruijie Xu, Run-Ze Fan, Lyumanshan Ye, Ethan Chern, Yixin Ye, Yikai Zhang, Yuqing Yang, Ting Wu, Binjie Wang, Shichao Sun, Yang Xiao, Yiyuan Li, Fan Zhou, Steffi Chern, Yiwei Qin, Yan Ma, Jiadi Su, Yixiu Liu, Yuxiang Zheng, Shaoting Zhang, Dahua Lin, Yu Qiao, Pengfei Liu
OlympicArena: Benchmarking Multi-discipline Cognitive Reasoning for Superintelligent AI. CoRR (2024)
Lanfeng Zhong, Xin Liao, Shaoting Zhang, Xiaofan Zhang, Guotai Wang
VLM-CPL: Consensus Pseudo Labels from Vision-Language Models for Human Annotation-Free Pathological Image Classification. CoRR (2024)
Wasif Khan, Seowung Leem, Kyle B. See, Joshua K. Wong, Shaoting Zhang, Ruogu Fang
A Comprehensive Survey of Foundation Models in Medicine. CoRR (2024)
Yijie Qu, Tao Lu, Shaoting Zhang, Guotai Wang
ScribSD+: Scribble-supervised medical image segmentation based on simultaneous multi-scale knowledge distillation and class-wise contrastive regularization. Comput. Medical Imaging Graph. 116 (2024)
Lanfeng Zhong, Xiangde Luo, Xin Liao, Shaoting Zhang, Guotai Wang
Semi-supervised pathological image segmentation via cross distillation of multiple attentions and Seg-CAM consistency. Pattern Recognit. 152 (2024)
Wenji Wang, Qing Xia, Zhennan Yan, Zhiqiang Hu, Yinan Chen, Wen Zheng, Xiao Wang, Shaoping Nie, Dimitris N. Metaxas, Shaoting Zhang
AVDNet: Joint coronary artery and vein segmentation with topological consistency. Medical Image Anal. 91 (2024)
Yiyue Li, Guangwu Qian, Xiaoshuang Jiang, Zekun Jiang, Wen Wen, Shaoting Zhang, Kang Li, Qicheng Lao
Hierarchical-Instance Contrastive Learning for Minority Detection on Imbalanced Medical Datasets. IEEE Trans. Medical Imaging 43 (1) (2024)
Shaoting Zhang, Dimitris N. Metaxas
On the challenges and perspectives of foundation models for medical image analysis. Medical Image Anal. 91 (2024)
Xiaoming Shi, Zeming Liu, Li Du, Yuxuan Wang, Hongru Wang, Yuhang Guo, Tong Ruan, Jie Xu, Xiaofan Zhang, Shaoting Zhang
Medical Dialogue System: A Survey of Categories, Methods, Evaluation and Challenges. ACL (Findings) (2024)
Kaitao Chen, Mianxin Liu, Fang Yan, Lei Ma, Xiaoming Shi, Lilong Wang, Xiaosong Wang, Lifeng Zhu, Zhe Wang, Mu Zhou, Shaoting Zhang
Cost-effective Instruction Learning for Pathology Vision and Language Analysis. CoRR (2024)
Ran Gu, Guotai Wang, Jiangshan Lu, Jingyang Zhang, Wenhui Lei, Yinan Chen, Wenjun Liao, Shichuan Zhang, Kang Li, Dimitris N. Metaxas, Shaoting Zhang
CDDSA: Contrastive domain disentanglement and style augmentation for generalizable medical image segmentation. Medical Image Anal. 89 (2023)
Gege Ma, Yuan Jin, Jianhu Pan, Shaoting Zhang, Dimitris N. Metaxas, Wentao Zhu
Automatic Lung Cancer Subtypes Classification on CT Images with Self-generated Multi-modality Hybrid Features. EMBC (2023)
Jia Fu, Tao Lu, Shaoting Zhang, Guotai Wang
UM-CAM: Uncertainty-weighted Multi-resolution Class Activation Maps for Weakly-supervised Fetal Brain Segmentation. MICCAI (7) (2023)
Meng Han, Xiangde Luo, Wenjun Liao, Shichuan Zhang, Shaoting Zhang, Guotai Wang
Scribble-based 3D Multiple Abdominal Organ Segmentation via Triple-branch Multi-dilated Network with Pixel- and Class-wise Consistency. CoRR (2023)
Ziyan Huang, Zhongying Deng, Jin Ye, Haoyu Wang, Yanzhou Su, Tianbin Li, Hui Sun, Junlong Cheng, Jianpin Chen, Junjun He, Yun Gu, Shaoting Zhang, Lixu Gu, Yu Qiao
A-Eval: A Benchmark for Cross-Dataset Evaluation of Abdominal Multi-Organ Segmentation. CoRR (2023)
Xianying He, Jiahui Li, Fang Yan, Linlin Wang, Wen Chen, Xiaodi Huang, Zhiqiang Hu, Qi Duan, Hongsheng Li, Shaoting Zhang, Jie Zhao
Predicting cancer outcomes from whole slide images via hybrid supervision learning. Neurocomputing 557 (2023)
Haoyu Wang, Sizheng Guo, Jin Ye, Zhongying Deng, Junlong Cheng, Tianbin Li, Jianpin Chen, Yanzhou Su, Ziyan Huang, Yiqing Shen, Bin Fu, Shaoting Zhang, Junjun He, Yu Qiao
SAM-Med3D. CoRR (2023)
Yijie Qu, Qianfei Zhao, Linda Wei, Tao Lu, Shaoting Zhang, Guotai Wang
ScribSD: Scribble-Supervised Fetal MRI Segmentation Based on Simultaneous Feature and Prediction Self-distillation. MILLanD@MICCAI (2023)
Lanfeng Zhong, Guotai Wang, Xin Liao, Shaoting Zhang
HAMIL: High-Resolution Activation Maps and Interleaved Learning for Weakly Supervised Segmentation of Histopathological Images. IEEE Trans. Medical Imaging 42 (10) (2023)
Jianghao Wu, Guotai Wang, Ran Gu, Tao Lu, Yinan Chen, Wentao Zhu, Tom Vercauteren, Sébastien Ourselin, Shaoting Zhang
UPL-SFDA: Uncertainty-aware Pseudo Label Guided Source-Free Domain Adaptation for Medical Image Segmentation. CoRR (2023)
Qianfei Zhao, Lanfeng Zhong, Jianghong Xiao, Jingbo Zhang, Yinan Chen, Wenjun Liao, Shaoting Zhang, Guotai Wang
Efficient Multi-Organ Segmentation From 3D Abdominal CT Images With Lightweight Network and Knowledge Distillation. IEEE Trans. Medical Imaging 42 (9) (2023)
Xiaoyu Yang, Lijian Xu, Hongsheng Li, Shaoting Zhang
ViLaM: A Vision-Language Model with Enhanced Visual Grounding and Generalization Capability. CoRR (2023)
Meng Han, Xiangde Luo, Wenjun Liao, Shichuan Zhang, Shaoting Zhang, Guotai Wang
Scribble-Based 3D Multiple Abdominal Organ Segmentation via Triple-Branch Multi-Dilated Network with Pixel- and Class-Wise Consistency. MICCAI (7) (2023)
Yankai Jiang, Zhongzhen Huang, Rongzhao Zhang, Xiaofan Zhang, Shaoting Zhang
ZePT: Zero-Shot Pan-Tumor Segmentation via Query-Disentangling and Self-Prompting. CoRR (2023)
Xiangde Luo, Jia Fu, Yunxin Zhong, Shuolin Liu, Bing Han, Mehdi Astaraki, Simone Bendazzoli, Iuliana Toma-Dasu, Yiwen Ye, Ziyang Chen, Yong Xia, Yanzhou Su, Jin Ye, Junjun He, Zhaohu Xing, Hongqiu Wang, Lei Zhu, Kaixiang Yang, Xin Fang, Zhiwei Wang, Chan Woong Lee, Sang Joon Park, Jaehee Chun, Constantin Ulrich, Klaus H. Maier-Hein, Nchongmaje Ndipenoch, Alina Dana Miron, Yongmin Li, Yimeng Zhang, Yu Chen, Lu Bai, Jinlong Huang, Chengyang An, Lisheng Wang, Kaiwen Huang, Yunqi Gu, Tao Zhou, Mu Zhou, Shichuan Zhang, Wenjun Liao, Guotai Wang, Shaoting Zhang
SegRap2023: A Benchmark of Organs-at-Risk and Gross Tumor Volume Segmentation for Radiotherapy Planning of Nasopharyngeal Carcinoma. CoRR (2023)
Jin Ye, Junlong Cheng, Jianpin Chen, Zhongying Deng, Tianbin Li, Haoyu Wang, Yanzhou Su, Ziyan Huang, Jilong Chen, Lei Jiang, Hui Sun, Min Zhu, Shaoting Zhang, Junjun He, Yu Qiao
SA-Med2D-20M Dataset: Segment Anything in 2D Medical Imaging with 20 Million masks. CoRR (2023)
Kexin Ding, Mu Zhou, Dimitris N. Metaxas, Shaoting Zhang
Pathology-and-Genomics Multimodal Transformer for Survival Outcome Prediction. MICCAI (6) (2023)
Ziyu Ni, Linda Wei, Lijian Xu, Qing Xia, Hongsheng Li, Shaoting Zhang, Dimitris N. Metaxas
Voxel2Hemodynamics: An End-to-End Deep Learning Method for Predicting Coronary Artery Hemodynamics. STACOM@MICCAI (2023)
Yangfan Ni, Geng Chen, Zhan Feng, Heng Cui, Dimitris N. Metaxas, Shaoting Zhang, Wentao Zhu
Domain-Adversarial Transformer Network for Multiphase Liver Tumor Segmentation. EMBC (2023)
Lijian Xu, Ziyu Ni, Xinglong Liu, Xiaosong Wang, Hongsheng Li, Shaoting Zhang
Learning A Multi-Task Transformer Via Unified And Customized Instruction Tuning For Chest Radiograph Interpretation. CoRR (2023)
Yunkun Zhang, Jin Gao, Mu Zhou, Xiaosong Wang, Yu Qiao, Shaoting Zhang, Dequan Wang
Text-Guided Foundation Model Adaptation for Pathological Image Classification. MICCAI (5) (2023)
Zhao Wang, Chang Liu, Shaoting Zhang, Qi Dou
Foundation Model for Endoscopy Video Analysis via Large-Scale Self-supervised Pre-train. MICCAI (9) (2023)
Jianghao Wu, Guotai Wang, Ran Gu, Tao Lu, Yinan Chen, Wentao Zhu, Tom Vercauteren, Sébastien Ourselin, Shaoting Zhang
UPL-SFDA: Uncertainty-Aware Pseudo Label Guided Source-Free Domain Adaptation for Medical Image Segmentation. IEEE Trans. Medical Imaging 42 (12) (2023)
Lanfeng Zhong, Xin Liao, Shaoting Zhang, Guotai Wang
Semi-supervised Pathological Image Segmentation via Cross Distillation of Multiple Attentions. MICCAI (6) (2023)
Shiyi Du, Xiaosong Wang, Yongyi Lu, Yuyin Zhou, Shaoting Zhang, Alan L. Yuille, Kang Li, Zongwei Zhou
Boosting Dermatoscopic Lesion Segmentation via Diffusion Models with Visual and Textual Prompts. CoRR (2023)
Meirui Jiang, Hongzheng Yang, Xiaofan Zhang, Shaoting Zhang, Qi Dou
Efficient Federated Tumor Segmentation via Parameter Distance Weighted Aggregation and Client Pruning. BrainLes@MICCAI (2) (2022)