John F. Rudan

Publication Activity (10 Years)

Years Active: 1997-2024
Publications (10 Years): 40

Top Topics

Mass Spectrometry

Surgical Navigation

Top Venues

Medical Imaging: Image-Guided Procedures

Int. J. Comput. Assist. Radiol. Surg.

Publications

Chris Yeung, Tamas Ungi, Zoe Hu, Amoon Jamzad, Martin Kaufmann, Ross Walker, Shaila Merchant, Cecil Jay Engel, Doris Jabs, John F. Rudan, Parvin Mousavi, Gabor Fichtinger
From quantitative metrics to clinical success: assessing the utility of deep learning for tumor segmentation in breast surgery. Int. J. Comput. Assist. Radiol. Surg. 19 (6) (2024)
Laura Connolly, Fahimeh Fooladgar, Amoon Jamzad, Martin Kaufmann, Ayesha Syeda, Kevin Yi Mi Ren, Purang Abolmaesumi, John F. Rudan, Doug McKay, Gabor Fichtinger, Parvin Mousavi
ImSpect: Image-driven self-supervised learning for surgical margin evaluation with mass spectrometry. Int. J. Comput. Assist. Radiol. Surg. 19 (6) (2024)
Olivia Radcliffe, Laura Connolly, Tamas Ungi, Caitlin T. Yeo, John F. Rudan, Gabor Fichtinger, Parvin Mousavi
Navigated surgical resection cavity inspection for breast conserving surgery. Medical Imaging: Image-Guided Procedures (2023)
Chris Yeung, Joshua Ehrlich, Amoon Jamzad, Martin Kaufmann, John F. Rudan, Cecil Jay Engel, Parvin Mousavi, Tamas Ungi, Gabor Fichtinger
Cautery trajectory analysis for evaluation of resection margins in breast-conserving surgery. Medical Imaging: Image-Guided Procedures (2023)
Josh Ehrlich, Chris Yeung, Martin Kaufman, Amoon Jamzad, John F. Rudan, Parvin Mousavi, Gabor Fichtinger, Tamas Ungi
Determining the time-delay of a mass spectrometry-based tissue sensor. Medical Imaging: Image-Guided Procedures (2023)
Hanad Elmi, Amoon Jamzad, Mackenzie Sharp, Jessica R. Rodgers, Martin Kaufmann, Tamara Jamaspishvili, Rachael Iseman, David Berman, John F. Rudan, Gabor Fichtinger, Parvin Mousavi
ViPRE: an open-source software implementation for end-to-end analysis of mass spectrometry data. Medical Imaging: Image-Guided Procedures (2023)
Dilakshan Srikanthan, Martin Kaufmann, Amoon Jamzad, Ayesha Syeda, Alice M. L. Santilli, Alireza Sedghi, Gabor Fichtinger, Jamie Purzner, John F. Rudan, Teresa Purzner, Parvin Mousavi
Attention-based multi-instance learning for improved glioblastoma detection using mass spectrometry. Medical Imaging: Image-Guided Procedures (2023)
David Morton, Laura Connolly, Leah A. Groves, Kyle Sunderland, Amoon Jamzad, John F. Rudan, Gabor Fichtinger, Tamas Ungi, Parvin Mousavi
Tracked tissue sensing for tumor bed inspection. Medical Imaging: Image-Guided Procedures (2023)
Lucas March, Jessica R. Rodgers, Rebecca Hisey, Amoon Jamzad, Alice M. L. Santilli, Doug McKay, John F. Rudan, Martin Kaufmann, Kevin Yi Mi Ren, Gabor Fichtinger, Parvin Mousavi
Cautery tool state detection using deep learning on intraoperative surgery videos. Medical Imaging: Image-Guided Procedures (2023)
Amoon Jamzad, Fahimeh Fooladgar, Laura Connolly, Dilakshan Srikanthan, Ayesha Syeda, Martin Kaufmann, Kevin Yi Mi Ren, Shaila Merchant, Cecil Jay Engel, Sonal Varma, Gabor Fichtinger, John F. Rudan, Parvin Mousavi
Bridging Ex-Vivo Training and Intra-operative Deployment for Surgical Margin Assessment with Evidential Graph Transformer. MICCAI (7) (2023)
Ayesha Syeda, Fahimeh Fooladgar, Amoon Jamzad, Dilakshan Srikanthan, Martin Kaufmann, Kevin Yi Mi Ren, Cecil Jay Engel, Ross Walker, Shaila Merchant, Doug McKay, Sonal Varma, Gabor Fichtinger, John F. Rudan, Parvin Mousavi
Self-supervised learning and uncertainty estimation for surgical margin detection. Medical Imaging: Image-Guided Procedures (2023)
Zoe Hu, Paola V. Nasute Fauerbach, Chris Yeung, Tamas Ungi, John F. Rudan, Cecil Jay Engel, Parvin Mousavi, Gabor Fichtinger, Doris Jabs
Real-time automatic tumor segmentation for ultrasound-guided breast-conserving surgery navigation. Int. J. Comput. Assist. Radiol. Surg. 17 (9) (2022)
Josh Ehrlich, Amoon Jamzad, Mark Asselin, Jessica Robin Rodgers, Martin Kaufmann, Tamás Haidegger, John F. Rudan, Parvin Mousavi, Gabor Fichtinger, Tamas Ungi
Sensor-Based Automated Detection of Electrosurgical Cautery States. Sensors 22 (15) (2022)
Alice Maria Leondina Santilli, Kevin Ren, Richard Oleschuk, Martin Kaufmann, John F. Rudan, Gabor Fichtinger, Parvin Mousavi
Application of Intraoperative Mass Spectrometry and Data Analytics for Oncological Margin Detection, A Review. IEEE Trans. Biomed. Eng. 69 (7) (2022)
Lucas March, Jessica Robin Rodgers, Amoon Jamzad, Alice M. L. Santilli, Rebecca Hisey, Doug McKay, John F. Rudan, Martin Kaufmann, Kevin Yi Mi Ren, Gabor Fichtinger, Parvin Mousavi
Phase recognition and cautery localization in basal cell carcinoma surgical videos. Medical Imaging: Image-Guided Procedures (2022)
Laura Connolly, Amoon Jamzad, Arash Nikniazi, Rana Poushimin, Jean-Michel Nunzi, John F. Rudan, Gabor Fichtinger, Parvin Mousavi
Feasibility of combined optical and acoustic imaging for surgical cavity scanning. Medical Imaging: Image-Guided Procedures (2022)
Fahimeh Fooladgar, Amoon Jamzad, Laura Connolly, Alice M. L. Santilli, Martin Kaufmann, Kevin Yi Mi Ren, Purang Abolmaesumi, John F. Rudan, Doug McKay, Gabor Fichtinger, Parvin Mousavi
Uncertainty estimation for margin detection in cancer surgery using mass spectrometry. Int. J. Comput. Assist. Radiol. Surg. 17 (12) (2022)
Alice M. L. Santilli, Amoon Jamzad, Alireza Sedghi, Martin Kaufmann, Kathryn Logan, Julie Wallis, Kevin Yi Mi Ren, Natasja N. Y. Janssen, Shaila Merchant, C. Jay Engel, Doug McKay, Sonal Varma, Ami Wang, Gabor Fichtinger, John F. Rudan, Parvin Mousavi
Domain adaptation and self-supervised learning for surgical margin detection. Int. J. Comput. Assist. Radiol. Surg. 16 (5) (2021)
Alice M. L. Santilli, Amoon Jamzad, Alireza Sedghi, Martin Kaufmann, Shaila Merchant, C. Jay Engel, Kathryn Logan, Julie Wallis, Natasja N. Y. Janssen, Sonal Varma, Gabor Fichtinger, John F. Rudan, Parvin Mousavi
Self-Supervised Learning For Detection Of Breast Cancer In Surgical Margins With Limited Data. ISBI (2021)
Faranak Akbarifar, Amoon Jamzad, Alice M. L. Santilli, M. Kauffman, Natasja N. Y. Janssen, Laura Connolly, Kevin Yi Mi Ren, Kaitlin Vanderbeck, Ami Wang, Doug McKay, John F. Rudan, Gabor Fichtinger, Parvin Mousavi
Graph-based analysis of mass spectrometry data for tissue characterization with application in basal cell carcinoma surgery. Medical Imaging: Image-Guided Procedures (2021)
Amoon Jamzad, Alice M. L. Santilli, Faranak Akbarifar, Martin Kaufmann, Kathryn Logan, Julie Wallis, Kevin Yi Mi Ren, Shaila Merchant, C. Jay Engel, Sonal Varma, Gabor Fichtinger, John F. Rudan, Parvin Mousavi
Graph Transformers for Characterization and Interpretation of Surgical Margins. MICCAI (7) (2021)
Laura Connolly, Amoon Jamzad, Martin Kaufmann, Catriona E. Farquharson, Kevin Yi Mi Ren, John F. Rudan, Gabor Fichtinger, Parvin Mousavi
Combined Mass Spectrometry and Histopathology Imaging for Perioperative Tissue Assessment in Cancer Surgery. J. Imaging 7 (10) (2021)
Laura Connolly, Amoon Jamzad, Martin Kaufmann, Rachel Rubino, Alireza Sedghi, Tamas Ungi, Mark Asselin, Scott Yam, John F. Rudan, Christopher Nicol, Gabor Fichtinger, Parvin Mousavi
Classification of tumor signatures from electrosurgical vapors using mass spectrometry and machine learning: a feasibility study. Medical Imaging: Image-Guided Procedures (2020)
Amoon Jamzad, Alireza Sedghi, Alice M. L. Santilli, Natasja N. Y. Janssen, Martin Kaufmann, Kevin Yi Mi Ren, Kaitlin Vanderbeck, Ami Wang, Doug McKay, John F. Rudan, Gabor Fichtinger, Parvin Mousavi
Improved Resection Margins in Surgical Oncology Using Intraoperative Mass Spectrometry. MICCAI (3) (2020)
Justin Gerolami, Victoria Wu, Paolo Nasute Fauerbach, Doris Jabs, C. Jay Engel, John F. Rudan, Shaila Merchant, Ross Walker, Emran Mohammad Abu Anas, Purang Abolmaesumi, Gabor Fichtinger, Tamas Ungi, Parvin Mousavi
An End-to-End Solution for Automatic Contouring of Tumor Region in Intraoperative Images of Breast Lumpectomy. EMBC (2020)
Alice M. L. Santilli, Amoon Jamzad, Natasja N. Y. Janssen, Martin Kaufmann, Laura Connolly, Kaitlin Vanderbeck, Ami Wang, Doug McKay, John F. Rudan, Gabor Fichtinger, Parvin Mousavi
Perioperative margin detection in basal cell carcinoma using a deep learning framework: a feasibility study. Int. J. Comput. Assist. Radiol. Surg. 15 (5) (2020)
Natasja N. Y. Janssen, Martin Kaufmann, Alice M. L. Santilli, Amoon Jamzad, Kaitlin Vanderbeck, Kevin Yi Mi Ren, Tamas Ungi, Parvin Mousavi, John F. Rudan, Doug McKay, Ami Wang, Gabor Fichtinger
Navigated tissue characterization during skin cancer surgery. Int. J. Comput. Assist. Radiol. Surg. 15 (10) (2020)
Brandon Chan, John F. Rudan, Parvin Mousavi, Manuela Kunz
Intraoperative integration of structured light scanning for automatic tissue classification: a feasibility study. Int. J. Comput. Assist. Radiol. Surg. 15 (4) (2020)
Brandon Chan, Jason Auyeung, John F. Rudan, Parvin Mousavi, Manuela Kunz
Tissue classification using machine learning to aid in intraoperative registration: a pilot study. Medical Imaging: Image-Guided Procedures (2019)
Mark Asselin, Martin Kaufmann, Julia Wiercigroch, Tamas Ungi, Andras Lasso, John F. Rudan, Gabor Fichtinger
Navigated real-time molecular analysis in the operating theatre, demonstration of concept. Medical Imaging: Image-Guided Procedures (2019)
Christina Yan, Tamas Ungi, Gabrielle Gauvin, Doris Jabs, Andras Lasso, C. Jay Engel, John F. Rudan, Gabor Fichtinger
Study into the displacement of tumor localization needle during navigated breast cancer surgery. Medical Imaging: Image-Guided Procedures (2017)
Aniqah T. Mair, Thomas A. Vaughan, Tamas Ungi, Andras Lasso, C. Jay Engel, John F. Rudan, Gabor Fichtinger
Evaluation of an interactive ultrasound-based breast tumor contouring workflow. Medical Imaging: Image-Guided Procedures (2017)
Sima Zakani, John F. Rudan, Randy E. Ellis
Translatory hip kinematics measured with optoelectronic surgical navigation. Int. J. Comput. Assist. Radiol. Surg. 12 (8) (2017)
Brandon Chan, Jason Auyeung, John F. Rudan, Randy E. Ellis, Manuela Kunz
Intraoperative application of hand-held structured light scanning: a feasibility study. Int. J. Comput. Assist. Radiol. Surg. 11 (6) (2016)
Emily Heffernan, Tamas Ungi, Thomas Vaughan, Padina Pezeshki, Andras Lasso, Gabrielle Gauvin, John F. Rudan, C. Jay Engel, Evelyn Morin, Gabor Fichtinger
Accuracy of lesion boundary tracking in navigated breast tumor excision. Medical Imaging: Image-Guided Procedures (2016)
Vinyas Harish, Aidan Baksh, Tamas Ungi, Andras Lasso, Zachary Baum, Gabrielle Gauvin, C. Jay Engel, John F. Rudan, Gabor Fichtinger
Measurement of electromagnetic tracking error in a navigated breast surgery setup. Medical Imaging: Image-Guided Procedures (2016)
Tamas Ungi, Gabrielle Gauvin, Andras Lasso, Caitlin T. Yeo, Padina Pezeshki, Thomas Vaughan, Kaci Carter, John F. Rudan, C. Jay Engel, Gabor Fichtinger
Navigated Breast Tumor Excision Using Electromagnetically Tracked Ultrasound and Surgical Instruments. IEEE Trans. Biomed. Eng. 63 (3) (2016)
Brian J. Rasquinha, Kate S. M. Loe, Andrew W. L. Dickinson, John F. Rudan, Randy E. Ellis
A Toroidal Probe for Measuring Surgically Exposed Joint Centers. MMVR (2016)
Andrew W. L. Dickinson, Brian J. Rasquinha, John F. Rudan, Randy E. Ellis
Personalized Guides for Registration in Surgical Navigation. MMVR (2016)
Kaci Carter, Thomas Vaughan, Matthew S. Holden, Gabrielle Gauvin, Padina Pezeshki, Andras Lasso, Tamas Ungi, Evelyn Morin, John F. Rudan, C. Jay Engel, Gabor Fichtinger
Visual feedback mounted on surgical tool: proof of concept. Medical Imaging: Image-Guided Procedures (2016)
Mohamed S. Hefny, John F. Rudan, Randy E. Ellis
Computer-assisted hip resurfacing planning using Lie group shape models. Int. J. Comput. Assist. Radiol. Surg. 10 (6) (2015)
Simrin Nagpal, Purang Abolmaesumi, Abtin Rasoulian, Ilker Hacihaliloglu, Tamas Ungi, Jill Osborn, Victoria A. Lessoway, John F. Rudan, Melanie Jaeger, Robert N. Rohling, Dan P. Borschneck, Parvin Mousavi
A multi-vertebrae CT to US registration of the lumbar spine in clinical data. Int. J. Comput. Assist. Radiol. Surg. 10 (9) (2015)
Manuela Kunz, S. Balaketheeswaran, Randy E. Ellis, John F. Rudan
The influence of osteophyte depiction in CT for patient-specific guided hip resurfacing procedures. Int. J. Comput. Assist. Radiol. Surg. 10 (6) (2015)
Mohamed S. Hefny, John F. Rudan, Randy E. Ellis
A Matrix Lie Group Approach to Statistical Shape Analysis of Bones. MMVR (2014)
M. Anand, Franklin King, Tamas Ungi, Andras Lasso, John F. Rudan, Jagadeesan Jayender, Jan Fritz, John A. Carrino, Ferenc A. Jolesz, Gabor Fichtinger
Design and development of a mobile image overlay system for needle interventions. EMBC (2014)
Brian Rasquinha, Junaid Sayani, John F. Rudan, Gavin C. A. Wood, Randy E. Ellis
Articular surface remodeling of the hip after periacetabular osteotomy. Int. J. Comput. Assist. Radiol. Surg. 7 (2) (2012)
Joseph B. Anstey, Erin Janine Smith, Brian Rasquinha, John F. Rudan, Randy E. Ellis
On the Use of Laser Scans to Validate Reverse Engineering of Bony Anatomy. MMVR (2011)
Manuela Kunz, John F. Rudan, Gavin C. A. Wood, Randy E. Ellis
Registration Stability of Physical Templates in Hip Surgery. MMVR (2011)
D. J. Mayman, John F. Rudan, David R. Pichora, D. Watson, Randy E. Ellis
Computer Assisted Alignment of the Oxford Unicompartmental Knee Arthroplasty: The Kingston Experience with Three Techniques. MICCAI (2) (2003)
Burton Ma, John F. Rudan, Randy E. Ellis
Affine Transformations and Atlases: Assessing a New Navigation Tool for Knee Arthroplasty. MICCAI (1) (2002)
Randy E. Ellis, D. Kerr, John F. Rudan, L. Davidson
Minimally Invasive Excision of Deep Bone Tumors. MICCAI (2001)
E. Chen, Randy E. Ellis, J. Tim Bryant, John F. Rudan
A computational model of postoperative knee kinematics. Medical Image Anal. 5 (4) (2001)
C. Y. Tso, Randy E. Ellis, John F. Rudan, M. M. Harrison
A Surgical Planning and Guidance System for High Tibial Osteotomies. MICCAI (1998)
Randy E. Ellis, David J. Fleet, J. Tim Bryant, John F. Rudan, P. Fenton
A method for evalutating CT-based surgical registration. CVRMed (1997)