Joachim Selbig

Publication Activity (10 Years)

Years Active: 1981-2016
Publications (10 Years): 3

Top Venues

Bioinform.

IPCAT

Theory Biosci.

BMC Bioinform.

Akademie der Wissenschaften der DDR, Berlin, Germany (PHD)

Education History

Akademie der Wissenschaften der DDR, Berlin, Germany

PHD

Publications

Christian Edlich-Muth, Moses Muraya, Thomas Altmann, Joachim Selbig
Phenomic prediction of maize hybrids. Biosyst. 146 (2016)
Dorothee Childs, Sergio Grimbs, Joachim Selbig
Refined elasticity sampling for Monte Carlo-based identification of stabilizing network patterns. Bioinform. 31 (12) (2015)
Alberto Castellini, Christian Edlich-Muth, Moses Muraya, Christian Klukas, Thomas Altmann, Joachim Selbig
Towards a Graph-Theoretic Approach to Hybrid Performance Prediction from Large-Scale Phenotypic Data. IPCAT (2015)
Sebastian Klie, Zoran Nikoloski, Joachim Selbig
Biological Cluster Evaluation for Gene Function Prediction. J. Comput. Biol. 21 (6) (2014)
Natascha Hill, Alexander Leow, Christoph Bleidorn, Detlef Groth, Ralph Tiedemann, Joachim Selbig, Stefanie Hartmann
Analysis of phylogenetic signal in protostomial intron patterns using Mutual Information. Theory Biosci. 132 (2) (2013)
Abdelhalim Larhlimi, László Dávid, Joachim Selbig, Alexander Bockmayr
F2C2: a fast tool for the computation of flux coupling in genome-scale metabolic networks. BMC Bioinform. 13 (2012)
Abdelhalim Larhlimi, Georg Basler, Sergio Grimbs, Joachim Selbig, Zoran Nikoloski
Stoichiometric capacitance reveals the theoretical capabilities of metabolic networks. Bioinform. 28 (18) (2012)
Dorothee Girbig, Joachim Selbig, Sergio Grimbs
A MATLAB toolbox for structural kinetic modeling. Bioinform. 28 (19) (2012)
Kristen Feher, Kathrin Jürchott, Joachim Selbig
Tailored Strategies for the Analysis of Metabolomic Data. IPCAT (2012)
Manuela Hische, Abdelhalim Larhlimi, Franziska Schwarz, Antje Fischer-Rosinský, Thomas Bobbert, Anke Assmann, Gareth Catchpole, Andreas F. H. Pfeiffer, Lothar Willmitzer, Joachim Selbig, Joachim Spranger
A distinct metabolic signature predicts development of fasting plasma glucose. J. Clin. Bioinform. 2 (2012)
Abdelhalim Larhlimi, Sylvain Blachon, Joachim Selbig, Zoran Nikoloski
Robustness of metabolic networks: A review of existing definitions. Biosyst. 106 (1) (2011)
Georg Basler, Oliver Ebenhöh, Joachim Selbig, Zoran Nikoloski
Mass-balanced randomization of metabolic networks. Bioinform. 27 (10) (2011)
Sergio Grimbs, Anne Arnold, Aneta Koseska, Jürgen Kurths, Joachim Selbig, Zoran Nikoloski
Spatiotemporal dynamics of the Calvin cycle: Multistationarity and symmetry breaking instabilities. Biosyst. 103 (2) (2011)
Kathrin Jürchott, Ke-Tai Guo, Gareth Catchpole, Kristen Feher, Lothar Willmitzer, Christian Schichor, Joachim Selbig
Comparison of metabolite profiles in U87 glioma cells and mesenchymal stem cells. Biosyst. 105 (2) (2011)
Zoran Nikoloski, Sergio Grimbs, Sebastian Klie, Joachim Selbig
Complexity of automated gene annotation. Biosyst. 104 (1) (2011)
Bruno B. Schwenk, Joachim Selbig, Yehuda Ben-Zion, Matthias Holschneider
ExPlanes: Exploring Planes in Triplet Data. J. Integr. Bioinform. 7 (3) (2010)
Dirk Repsilber, Sabine Kern, Anna Telaar, Gerhard Walzl, Gillian F. Black, Joachim Selbig, Shreemanta K. Parida, Stefan H. E. Kaufmann, Marc Jacobsen
Biomarker discovery in heterogeneous tissue samples -taking the in-silico deconfounding approach. BMC Bioinform. 11 (2010)
Michal Rosen-Zvi, Ehud Aharoni, Joachim Selbig
HIV-1 Drug Resistance Prediction and Therapy Optimization: A Case Study for the Application of Classification and Clustering Methods. Similarity-Based Clustering (2009)
Joachim Selbig, Matthias Steinfath, Dirk Repsilber
Network Structure and Biological Function: Reconstruction, Modeling, and Statistical Approaches. EURASIP J. Bioinform. Syst. Biol. 2009 (2009)
Pawel Durek, Christian Schudoma, Wolfram Weckwerth, Joachim Selbig, Dirk Walther
Detection and characterization of 3D-signature phosphorylation site motifs and their contribution towards improved phosphorylation site prediction in proteins. BMC Bioinform. 10 (2009)
Joshua L. Heazlewood, Pawel Durek, Jan Hummel, Joachim Selbig, Wolfram Weckwerth, Dirk Walther, Waltraud X. Schulze
and a plant-specific phosphorylation site predictor. Nucleic Acids Res. 36 (Database-Issue) (2008)
Zoran Nikoloski, Sergio Grimbs, Joachim Selbig, Oliver Ebenhöh
Hardness and Approximability of the Inverse Scope Problem. WABI (2008)
Steve Dworschak, Susanne Grell, Victoria J. Nikiforova, Torsten Schaub, Joachim Selbig
Modeling Biological Networks by Action Languages via Answer Set Programming. Constraints An Int. J. 13 (1-2) (2008)
Wolfram Stacklies, Henning Redestig, Matthias Scholz, Dirk Walther, Joachim Selbig
pcaMethods - a bioconductor package providing PCA methods for incomplete data. Bioinform. 23 (9) (2007)
Henning Redestig, Daniel Weicht, Joachim Selbig, Matthew A. Hannah
Transcription factor target prediction using multiple short expression time series from Arabidopsis thaliana. BMC Bioinform. 8 (2007)
Ralf Steuer, Adriano Nunes Nesi, Alisdair R. Fernie, Thilo Gross, Bernd Blasius, Joachim Selbig
From structure to dynamics of metabolic pathways: application to the plant mitochondrial TCA cycle. Bioinform. 23 (11) (2007)
Jan Hummel, Michaela Niemann, Stefanie Wienkoop, Waltraud X. Schulze, Dirk Steinhauser, Joachim Selbig, Dirk Walther, Wolfram Weckwerth
ProMEX: a mass spectral reference database for proteins and protein phosphorylation sites. BMC Bioinform. 8 (2007)
Susanne Grell, Torsten Schaub, Joachim Selbig
Modelling Biological Networks by Action Languages Via Answer Set Programming. ICLP (2006)
Ralf Steuer, Peter Humburg, Joachim Selbig
Validation and functional annotation of expression-based clusters based on gene ontology. BMC Bioinform. 7 (2006)
Matthias Steinfath, Dirk Repsilber, Manuela Hische, Nicolas Schauer, Alisdair R. Fernie, Joachim Selbig
Metabolite profiles as a reflection of physiological status -- a methodological validation. J. Integr. Bioinform. 3 (2) (2006)
Henning Redestig, Florian Sohler, Ralf Zimmer, Joachim Selbig
Unsupervised Decision Trees Structured by Gene Ontology (GO-UDTs) for the Interpretation of Microarray Data. GfKl (2006)
Kirsten Roomp, Niko Beerenwinkel, Tobias Sing, Eugen Schülter, Joachim Büch, Saleta Sierra-Aragon, Martin Däumer, Daniel Hoffmann, Rolf Kaiser, Thomas Lengauer, Joachim Selbig
Arevir: A Secure Platform for Designing Personalized Antiretroviral Therapies Against HIV. DILS (2006)
Matthias Scholz, Fatma Kaplan, Charles L. Guy, Joachim Kopka, Joachim Selbig
Non-linear PCA: a missing data approach. Bioinform. 21 (20) (2005)
Niko Beerenwinkel, Jörg Rahnenführer, Rolf Kaiser, Daniel Hoffmann, Joachim Selbig, Thomas Lengauer
Mtreemix: a software package for learning and using mixture models of mutagenetic trees. Bioinform. 21 (9) (2005)
Niko Beerenwinkel, Tobias Sing, Thomas Lengauer, Jörg Rahnenführer, Kirsten Roomp, Igor Savenkov, Roman Fischer, Daniel Hoffmann, Joachim Selbig, Klaus Korn, Hauke Walter, Thomas Berg, Patrick Braun, Gerd Fätkenheuer, Mark Oette, Jürgen K. Rockstroh, Bernd Kupfer, Rolf Kaiser, Martin Däumer
Computational methods for the design of effective therapies against drug resistant HIV strains. Bioinform. 21 (21) (2005)
Niko Beerenwinkel, Jörg Rahnenführer, Martin Däumer, Daniel Hoffmann, Rolf Kaiser, Joachim Selbig, Thomas Lengauer
Learning Multiple Evolutionary Pathways from Cross-Sectional Data. J. Comput. Biol. 12 (6) (2005)
Jan Hummel, Nima Keshvari, Wolfram Weckwerth, Joachim Selbig
Species-specific analysis of protein sequence motifs using mutual information. BMC Bioinform. 6 (2005)
Matthias Scholz, Yves Gibon, Mark Stitt, Joachim Selbig
mutants. German Conference on Bioinformatics (2004)
Niko Beerenwinkel, Jörg Rahnenführer, Martin Däumer, Daniel Hoffmann, Rolf Kaiser, Joachim Selbig, Thomas Lengauer
Learning multiple evolutionary pathways from cross-sectional data. RECOMB (2004)
André Flöter, Jacques Nicolas, Torsten Schaub, Joachim Selbig
Threshold extraction in metabolite concentration data. Bioinform. 20 (10) (2004)
Matthias Scholz, S. Gatzek, Alisdair R. Sterling, Oliver Fiehn, Joachim Selbig
Metabolite fingerprinting: detecting biological features by independent component analysis. Bioinform. 20 (15) (2004)
Carsten O. Daub, Ralf Steuer, Joachim Selbig, Sebastian Kloska
Estimating mutual information using B-spline functions - an improved similarity measure for analysing gene expression data. BMC Bioinform. 5 (2004)
Alexander Lüdemann, Daniel Weicht, Joachim Selbig, Joachim Kopka
PaVESy: Pathway Visualization and Editing System. Bioinform. 20 (16) (2004)
Dirk Steinhauser, Björn H. Junker, Alexander Lüdemann, Joachim Selbig, Joachim Kopka
Hypothesis-driven approach to predict transcriptional units from gene expression data. Bioinform. 20 (12) (2004)
Carsten O. Daub, Sebastian Kloska, Joachim Selbig
MetaGeneAlyse: analysis of integrated transcriptional and metabolite data. Bioinform. 19 (17) (2003)
Niko Beerenwinkel, Thomas Lengauer, Martin Däumer, Rolf Kaiser, Hauke Walter, Klaus Korn, Daniel Hoffmann, Joachim Selbig
Methods for optimizing antiviral combination therapies. ISMB (Supplement of Bioinformatics) (2003)
Niko Beerenwinkel, Martin Däumer, Mark Oette, Klaus Korn, Daniel Hoffmann, Rolf Kaiser, Thomas Lengauer, Joachim Selbig, Hauke Walter
Geno2pheno: estimating phenotypic drug resistance from HIV-1 genotypes. Nucleic Acids Res. 31 (13) (2003)
André Flöter, Jacques Nicolas, Torsten Schaub, Joachim Selbig
Threshold extraction in metabolite concentration data. German Conference on Bioinformatics (2003)
Niko Beerenwinkel, Barbara Schmidt, Hauke Walter, Rolf Kaiser, Thomas Lengauer, Daniel Hoffmann, Klaus Korn, Joachim Selbig
Diversity and complexity of HIV-1 drug resistance: A bioinformatics approach to predicting phenotype from genotype. Proc. Natl. Acad. Sci. USA 99 (12) (2002)
Ralph E. Steuer, Jürgen Kurths, Carsten O. Daub, Janko Weise, Joachim Selbig
The mutual information: Detecting and evaluating dependencies between variables. ECCB (2002)
Niko Beerenwinkel, Barbara Schmidt, Hauke Walter, Rolf Kaiser, Thomas Lengauer, Daniel Hoffmann, Klaus Korn, Joachim Selbig
Identifying drug resistance-associated patterns in HIV genotypes. German Conference on Bioinformatics (2001)
Niko Beerenwinkel, Barbara Schmidt, Hauke Walter, Rolf Kaiser, Thomas Lengauer, Daniel Hoffmann, Klaus Korn, Joachim Selbig
Geno2pheno: Interpreting Genotypic HIV Drug Resistance Tests. IEEE Intell. Syst. 16 (6) (2001)
Joachim Selbig, Heinz-Theodor Mevissen, Thomas Lengauer
Decision tree-based formation of consensus protein secondary structure prediction. Bioinform. 15 (12) (1999)
Joachim Selbig
Knowledge Acquisition by Inductive Learning from Examples. AII (1986)
Fritz Wysotzki, Werner Kolbe, Joachim Selbig
Concept Learning by Structured Examples - An Algebraic Approach. IJCAI (1981)

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Publication Activity (10 Years)

Top Topics

Top Venues

Joachim Selbig