Daniel Hoffmann

Publication Activity (10 Years)

Years Active: 2001-2021
Publications (10 Years): 7

Top Topics

Dimension Reduction Methods

Dempster Shafer

Evidence Theory

Top Venues

J. Chem. Inf. Model.

PLoS Comput. Biol.

CHI Extended Abstracts

Publications

Niklas Tötsch, Daniel Hoffmann
Classifier uncertainty: evidence, potential impact, and probabilistic treatment. PeerJ Comput. Sci. 7 (2021)
Niklas Tötsch, Daniel Hoffmann
Classifier uncertainty: evidence, potential impact, and probabilistic treatment. CoRR (2020)
Simo Kitanovski, Daniel Hoffmann
IgGeneUsage: differential gene usage in immune repertoires. Bioinform. 36 (11) (2020)
Mario Mösch, Gerhard Fischerauer, Daniel Hoffmann
A Self-Adaptive and Self-Sufficient Energy Harvesting System. Sensors 20 (9) (2020)
Jean-Noël Grad, Alba Gigante, Christoph Wilms, Jan Nikolaj Dybowski, Ludwig Ohl, Christian Ottmann, Carsten Schmuck, Daniel Hoffmann
Locating Large, Flexible Ligands on Proteins. J. Chem. Inf. Model. 58 (2) (2018)
Mohammadkarim Saeedghalati, Farnoush Farahpour, Bettina Budeus, Anja Lange, Astrid M. Westendorf, Marc Seifert, Ralf Küppers, Daniel Hoffmann
Quantitative Comparison of Abundance Structures of Generalized Communities: From B-Cell Receptor Repertoires to Microbiomes. PLoS Comput. Biol. 13 (1) (2017)
Jan Renz, Daniel Hoffmann, Thomas Staubitz, Christoph Meinel
Using A/B testing in MOOC environments. LAK (2016)
Pedro Lopes, Alexandra Ion, Willi Müller, Daniel Hoffmann, Patrik Jonell, Patrick Baudisch
Proprioceptive Interaction. CHI Extended Abstracts (2015)
Pedro Lopes, Alexandra Ion, Willi Mueller, Daniel Hoffmann, Patrik Jonell, Patrick Baudisch
Proprioceptive Interaction. CHI (2015)
Dominik Heider, Jan Dybowski, Christoph Wilms, Daniel Hoffmann
A simple structure-based model for the prediction of HIV-1 co-receptor tropism. BioData Min. 7 (2014)
Rocio Rebollido-Rios, Shyam Bandari, Christoph Wilms, Stanislav Jakuschev, Andrea Vortkamp, Kay Grobe, Daniel Hoffmann
Signaling Domain of Sonic Hedgehog as Cannibalistic Calcium-Regulated Zinc-Peptidase. PLoS Comput. Biol. 10 (7) (2014)
Alan Bränzel, Christian Holz, Daniel Hoffmann, Dominik Schmidt, Marius Knaust, Patrick Lühne, René Meusel, Stephan Richter, Patrick Baudisch
GravitySpace: tracking users and their poses in a smart room using a pressure-sensing floor. CHI Extended Abstracts (2013)
Alan Bränzel, Christian Holz, Daniel Hoffmann, Dominik Schmidt, Marius Knaust, Patrick Lühne, René Meusel, Stephan Richter, Patrick Baudisch
GravitySpace: tracking users and their poses in a smart room using a pressure-sensing floor. CHI (2013)
Dominik Heider, Christoph Bartenhagen, Jan Nikolaj Dybowski, Sascha Hauke, Martin Pyka, Daniel Hoffmann
Unsupervised Dimension Reduction Methods for Protein Sequence Classification. GfKl (2012)
Samuel Genheden, Oliver Kuhn, Paulius Mikulskis, Daniel Hoffmann, Ulf Ryde
The Normal-Mode Entropy in the MM/GBSA Method: Effect of System Truncation, Buffer Region, and Dielectric Constant. J. Chem. Inf. Model. 52 (8) (2012)
Jan Nikolaj Dybowski, Mona Riemenschneider, Sascha Hauke, Martin Pyka, Jens Verheyen, Daniel Hoffmann, Dominik Heider
Improved Bevirimat resistance prediction by combination of structural and sequence-based classifiers. BioData Min. 4 (2011)
Dominik Heider, Daniel Hoffmann
Interpol: An R package for preprocessing of protein sequences. BioData Min. 4 (2011)
Seungoh Paek, Daniel Hoffmann, Antonios Saravanos
Spatial contiguity and implicit learning in hypertext. HT (2010)
Jan Nikolaj Dybowski, Dominik Heider, Daniel Hoffmann
Prediction of Co-Receptor Usage of HIV-1 from Genotype. PLoS Comput. Biol. 6 (4) (2010)
Dominik Heider, Jens Verheyen, Daniel Hoffmann
Predicting Bevirimat resistance of HIV-1 from genotype. BMC Bioinform. 11 (2010)
Stanislav Jakuschev, Daniel Hoffmann
A Novel Algorithm for Macromolecular Epitope Matching. Algorithms 2 (1) (2009)
Wolfram Gronwald, Tim Hohm, Daniel Hoffmann
Evolutionary Pareto-optimization of stably folding peptides. BMC Bioinform. 9 (2008)
Tim Hohm, Philipp Limbourg, Daniel Hoffmann
A Multiobjective Evolutionary Method for the Design of Peptidic Mimotopes. J. Comput. Biol. 13 (1) (2006)
Kirsten Roomp, Niko Beerenwinkel, Tobias Sing, Eugen Schülter, Joachim Büch, Saleta Sierra-Aragon, Martin Däumer, Daniel Hoffmann, Rolf Kaiser, Thomas Lengauer, Joachim Selbig
Arevir: A Secure Platform for Designing Personalized Antiretroviral Therapies Against HIV. DILS (2006)
Niko Beerenwinkel, Jörg Rahnenführer, Rolf Kaiser, Daniel Hoffmann, Joachim Selbig, Thomas Lengauer
Mtreemix: a software package for learning and using mixture models of mutagenetic trees. Bioinform. 21 (9) (2005)
Tim Hohm, Daniel Hoffmann
A multi-objective evolutionary approach to peptide structure redesign and stabilization. GECCO (2005)
Tobias Sing, Valentina Svicher, Niko Beerenwinkel, Francesca Ceccherini-Silberstein, Martin Däumer, Rolf Kaiser, Hauke Walter, Klaus Korn, Daniel Hoffmann, Mark Oette, Jürgen K. Rockstroh, Gerd Fätkenheuer, Carlo-Federico Perno, Thomas Lengauer
Characterization of Novel HIV Drug Resistance Mutations Using Clustering, Multidimensional Scaling and SVM-Based Feature Ranking. PKDD (2005)
Niko Beerenwinkel, Tobias Sing, Thomas Lengauer, Jörg Rahnenführer, Kirsten Roomp, Igor Savenkov, Roman Fischer, Daniel Hoffmann, Joachim Selbig, Klaus Korn, Hauke Walter, Thomas Berg, Patrick Braun, Gerd Fätkenheuer, Mark Oette, Jürgen K. Rockstroh, Bernd Kupfer, Rolf Kaiser, Martin Däumer
Computational methods for the design of effective therapies against drug resistant HIV strains. Bioinform. 21 (21) (2005)
Niko Beerenwinkel, Jörg Rahnenführer, Martin Däumer, Daniel Hoffmann, Rolf Kaiser, Joachim Selbig, Thomas Lengauer
Learning Multiple Evolutionary Pathways from Cross-Sectional Data. J. Comput. Biol. 12 (6) (2005)
Niko Beerenwinkel, Jörg Rahnenführer, Martin Däumer, Daniel Hoffmann, Rolf Kaiser, Joachim Selbig, Thomas Lengauer
Learning multiple evolutionary pathways from cross-sectional data. RECOMB (2004)
Niko Beerenwinkel, Thomas Lengauer, Martin Däumer, Rolf Kaiser, Hauke Walter, Klaus Korn, Daniel Hoffmann, Joachim Selbig
Methods for optimizing antiviral combination therapies. ISMB (Supplement of Bioinformatics) (2003)
Niko Beerenwinkel, Martin Däumer, Mark Oette, Klaus Korn, Daniel Hoffmann, Rolf Kaiser, Thomas Lengauer, Joachim Selbig, Hauke Walter
Geno2pheno: estimating phenotypic drug resistance from HIV-1 genotypes. Nucleic Acids Res. 31 (13) (2003)
Niko Beerenwinkel, Barbara Schmidt, Hauke Walter, Rolf Kaiser, Thomas Lengauer, Daniel Hoffmann, Klaus Korn, Joachim Selbig
Diversity and complexity of HIV-1 drug resistance: A bioinformatics approach to predicting phenotype from genotype. Proc. Natl. Acad. Sci. USA 99 (12) (2002)
Niko Beerenwinkel, Barbara Schmidt, Hauke Walter, Rolf Kaiser, Thomas Lengauer, Daniel Hoffmann, Klaus Korn, Joachim Selbig
Identifying drug resistance-associated patterns in HIV genotypes. German Conference on Bioinformatics (2001)
Niko Beerenwinkel, Barbara Schmidt, Hauke Walter, Rolf Kaiser, Thomas Lengauer, Daniel Hoffmann, Klaus Korn, Joachim Selbig
Geno2pheno: Interpreting Genotypic HIV Drug Resistance Tests. IEEE Intell. Syst. 16 (6) (2001)