Alisdair R. Fernie

Publication Activity (10 Years)

Years Active: 2005-2021
Publications (10 Years): 2

Top Topics

Abstraction Levels

Interactive Data Mining

Graphical User Interface

Metabolic Pathways

Top Venues

Nucleic Acids Res.

PLoS Comput. Biol.

Publications

Mohammad Amin Omidbakhshfard, Ewelina M. Sokolowska, Valerio Di Vittori, Leonardo Perez de Souza, Anastasiya Kuhalskaya, Yariv Brotman, Saleh Alseekh, Alisdair R. Fernie, Aleksandra Skirycz
. Patterns 2 (4) (2021)
Max Sajitz-Hermstein, Nadine Töpfer, Sabrina Kleessen, Alisdair R. Fernie, Zoran Nikoloski
iReMet-flux: constraint-based approach for integrating relative metabolite levels into a stoichiometric metabolic models. Bioinform. 32 (17) (2016)
Nadine Töpfer, Federico Scossa, Alisdair R. Fernie, Zoran Nikoloski
Variability of Metabolite Levels Is Linked to Differential Metabolic Pathways in Arabidopsis's Responses to Abiotic Stresses. PLoS Comput. Biol. 10 (6) (2014)
Marc Lohse, Anthony M. Bolger, Axel Nagel, Alisdair R. Fernie, John E. Lunn, Mark Stitt, Björn Usadel
: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics. Nucleic Acids Res. 40 (Web-Server-Issue) (2012)
Ralf Steuer, Adriano Nunes Nesi, Alisdair R. Fernie, Thilo Gross, Bernd Blasius, Joachim Selbig
From structure to dynamics of metabolic pathways: application to the plant mitochondrial TCA cycle. Bioinform. 23 (11) (2007)
Lothar Willmitzer, Camila Caldana, Alisdair R. Fernie, Patrick Giavalisco, Matthew A. Hannah, Henning Redestig, Dirk Steinhauser
Integrative Analysis of Transcriptome and Metabolome Data. German Conference on Bioinformatics (2007)
Björn Usadel, Axel Nagel, Dirk Steinhauser, Yves Gibon, Oliver E. Bläsing, Henning Redestig, Nese Sreenivasulu, Leonard Krall, Matthew A. Hannah, Fabien Poree, Alisdair R. Fernie, Mark Stitt
PageMan: An interactive ontology tool to generate, display, and annotate overview graphs for profiling experiments. BMC Bioinform. 7 (2006)
Matthias Steinfath, Dirk Repsilber, Manuela Hische, Nicolas Schauer, Alisdair R. Fernie, Joachim Selbig
Metabolite profiles as a reflection of physiological status -- a methodological validation. J. Integr. Bioinform. 3 (2) (2006)
Joachim Kopka, Nicolas Schauer, Stephan Krueger, Claudia Birkemeyer, Björn Usadel, Eveline Bergmüller, Peter Dörmann, Wolfram Weckwerth, Yves Gibon, Mark Stitt, Lothar Willmitzer, Alisdair R. Fernie, Dirk Steinhauser
GMD@CSB.DB: the Golm Metabolome Database. Bioinform. 21 (8) (2005)