James L. Chen

Publication Activity (10 Years)

Years Active: 2007-2022
Publications (10 Years): 4

Top Topics

Cancer Patients

Protein Interaction

Electronic Health Records

Top Venues

J. Am. Medical Informatics Assoc.

Publications

Elmer V. Bernstam, Jeremy L. Warner, John C. Krauss, Edward P. Ambinder, Wendy S. Rubinstein, George Komatsoulis, Robert S. Miller, James L. Chen
Quantitating and assessing interoperability between electronic health records. J. Am. Medical Informatics Assoc. 29 (5) (2022)
Nathan D. Seligson, Jeremy L. Warner, William S. Dalton, David Martin, Robert S. Miller, Debra Patt, Kenneth L. Kehl, Matvey B. Palchuk, Gil Alterovitz, Laura K. Wiley, Ming Huang, Feichen Shen, Yanshan Wang, Khoa A. Nguyen, Anthony F. Wong, Funda Meric-Bernstam, Elmer V. Bernstam, James L. Chen
Recommendations for patient similarity classes: results of the AMIA 2019 workshop on defining patient similarity. J. Am. Medical Informatics Assoc. 27 (11) (2020)
A. Grant Schissler, Qike Li, James L. Chen, Colleen Kenost, Ikbel Achour, Dean Billheimer, Haiquan Li, Walter W. Piegorsch, Yves A. Lussier
Analysis of aggregated cell-cell statistical distances within pathways unveils therapeutic-resistance mechanisms in circulating tumor cells. Bioinform. 32 (12) (2016)
Preethi Raghavan, James L. Chen, Eric Fosler-Lussier, Albert M. Lai
How essential are unstructured clinical narratives and information fusion to clinical trial recruitment? CoRR (2015)
Chaitanya Shivade, James L. Chen
Classifier-Free, Integrated Genomic Predictions of Prostate Cancer Recurrence. MedInfo (2013)
Younghee Lee, Haiquan Li, Jianrong Li, Ellen Rebman, Ikbel Achour, Kelly Regan, Eric R. Gamazon, James L. Chen, Xinan Holly Yang, Nancy J. Cox, Yves A. Lussier
Research and applications: Network models of genome-wide association studies uncover the topological centrality of protein interactions in complex diseases. J. Am. Medical Informatics Assoc. 20 (4) (2013)
Yves A. Lussier, Walter M. Stadler, James L. Chen
Advantages of genomic complexity: bioinformatics opportunities in microRNA cancer signatures. J. Am. Medical Informatics Assoc. 19 (2) (2012)
Haiquan Li, Younghee Lee, James L. Chen, Ellen Rebman, Jianrong Li, Yves A. Lussier
Complex-disease networks of trait-associated single-nucleotide polymorphisms (SNPs) unveiled by information theory. J. Am. Medical Informatics Assoc. 19 (2) (2012)
James L. Chen, Jianrong Li, Walter M. Stadler, Yves A. Lussier
Protein-network modeling of prostate cancer gene signatures reveals essential pathways in disease recurrence. J. Am. Medical Informatics Assoc. 18 (4) (2011)
James L. Chen, Lee T. Sam, Yong Huang, Younghee Lee, Jianrong Li, Yang Liu, H. Rosie Xing, Yves A. Lussier
Protein interaction network underpins concordant prognosis among heterogeneous breast cancer signatures. J. Biomed. Informatics 43 (3) (2010)
Xinan Yang, Younghee Lee, Yong Huang, James L. Chen, H. Rosie Xing, Yves A. Lussier
Stromal microenvironment processes unveiled by biological component analysis of gene expression in xenograft tumor models. BMC Bioinform. 11 (S-9) (2010)
Xinan Yang, Yong Huang, James L. Chen, Jianming Xie, Xiao Sun, Yves A. Lussier
Mechanism-anchored profiling derived from epigenetic networks predicts outcome in acute lymphoblastic leukemia. BMC Bioinform. 10 (S-9) (2009)
Sylvain V. Costes, Artem L. Ponomarev, James L. Chen, David Nguyen, Francis A. Cucinotta, Mary Helen Barcellos-Hoff
Image-Based Modeling Reveals Dynamic Redistribution of DNA Damage into Nuclear Sub-Domains. PLoS Comput. Biol. 3 (8) (2007)
James L. Chen, Yang Liu, Lee T. Sam, Jianrong Li, Yves A. Lussier
Evaluation of high-throughput functional categorization of human disease genes. BMC Bioinform. 8 (S-3) (2007)