Hakim Tafer

Publication Activity (10 Years)

Years Active: 2005-2014
Publications (10 Years): 0

Top Topics

Secondary Structure

Video Annotation

Top Venues

Nucleic Acids Res.

Publications

Juliane C. Dohm, André E. Minoche, Daniela Holtgräwe, Salvador Capella-Gutiérrez, Falk Zakrzewski, Hakim Tafer, Oliver Rupp, Thomas Rosleff Sörensen, Ralf Stracke, Richard Reinhardt, Alexander Goesmann, Thomas Kraft, Britta Schulz, Peter F. Stadler, Thomas Schmidt, Toni Gabaldón, Hans Lehrach, Bernd Weisshaar, Heinz Himmelbauer
) Open. Nat. 505 (7484) (2014)
Sebastian Bartschat, Stephanie Kehr, Hakim Tafer, Peter F. Stadler, Jana Hertel
snoStrip: a snoRNA annotation pipeline. Bioinform. 30 (1) (2014)
Radhakrishnan Sabarinathan, Hakim Tafer, Stefan E. Seemann, Ivo L. Hofacker, Peter F. Stadler, Jan Gorodkin
The RNAsnp web server: predicting SNP effects on local RNA secondary structure. Nucleic Acids Res. 41 (Webserver-Issue) (2013)
David Langenberger, Sebastian Bartschat, Jana Hertel, Steve Hoffmann, Hakim Tafer, Peter F. Stadler
MicroRNA or Not MicroRNA? BSB (2011)
Stephanie Kehr, Sebastian Bartschat, Peter F. Stadler, Hakim Tafer
PLEXY: efficient target prediction for box C/D snoRNAs. Bioinform. 27 (2) (2011)
Florian Eggenhofer, Hakim Tafer, Peter F. Stadler, Ivo L. Hofacker
RNApredator: fast accessibility-based prediction of sRNA targets. Nucleic Acids Res. 39 (Web-Server-Issue) (2011)
Hakim Tafer, Fabian Amman, Florian Eggenhofer, Peter F. Stadler, Ivo L. Hofacker
Fast accessibility-based prediction of RNA-RNA interactions. Bioinform. 27 (14) (2011)
Ronny Lorenz, Stephan H. Bernhart, Christian Höner zu Siederdissen, Hakim Tafer, Christoph Flamm, Peter F. Stadler, Ivo L. Hofacker
ViennaRNA Package 2.0. Algorithms Mol. Biol. 6 (2011)
Hakim Tafer, Stephanie Kehr, Jana Hertel, Ivo L. Hofacker, Peter F. Stadler
: efficient target prediction for H/ACA snoRNAs. Bioinform. 26 (5) (2010)
Radka Svobodová Vareková, Ivan Bradác, Martin Plchút, Michal Skrdla, Michael Wacenovsky, Helmuth Mahr, Georg Mayer, Herbert Tanner, Hermann Brugger, Josef Withalm, Peter Lederer, Heinrich J. Huber, Gerhard Gierlinger, Ronald Graf, Hakim Tafer, Ivo L. Hofacker, Peter Schuster, Martin Polcík
www.rnaworkbench.com: A new program for analyzing RNA interference. Comput. Methods Programs Biomed. 90 (1) (2008)
Ulrike Mückstein, Hakim Tafer, Stephan H. Bernhart, Maribel Hernandez-Rosales, Jörg Vogel, Peter F. Stadler, Ivo L. Hofacker
Translational Control by RNA-RNA Interaction: Improved Computation of RNA-RNA Binding Thermodynamics. BIRD (2008)
Hakim Tafer, Ivo L. Hofacker
RNAplex: a fast tool for RNA-RNA interaction search. Bioinform. 24 (22) (2008)
Hakim Tafer
RNAplex a Fast and Flexible RNA-RNA Interaction Search Tool. German Conference on Bioinformatics (2007)
Stephan H. Bernhart, Hakim Tafer, Ulrike Mückstein, Christoph Flamm, Peter F. Stadler, Ivo L. Hofacker
Partition function and base pairing probabilities of RNA heterodimers. Algorithms Mol. Biol. 1 (2006)
Ulrike Mückstein, Hakim Tafer, Jörg Hackermüller, Stephan H. Bernhart, Peter F. Stadler, Ivo L. Hofacker
Thermodynamics of RNA-RNA binding. Bioinform. 22 (10) (2006)
Ulrike Mückstein, Hakim Tafer, Jörg Hackermüller, Stephan H. Bernhart, Peter F. Stadler, Ivo L. Hofacker
Thermodynamics of RNA-RNA Binding. German Conference on Bioinformatics (2005)