Farrokh Mehryary

Publication Activity (10 Years)

Years Active: 2016-2023
Publications (10 Years): 11

Top Topics

Supervised And Unsupervised Learning

Relation Extraction

Convolutional Neural Networks

Top Venues

Database J. Biol. Databases Curation

IEEE ACM Trans. Comput. Biol. Bioinform.

Publications

Damian Szklarczyk, Rebecca Kirsch, Mikaela Koutrouli, Katerina C. Nastou, Farrokh Mehryary, Radja Hachilif, Annika L. Gable, Tao Fang, Nadezhda T. Doncheva, Sampo Pyysalo, Peer Bork, Lars Juhl Jensen, Christian von Mering
The STRING database in 2023: protein-protein association networks and functional enrichment analyses for any sequenced genome of interest. Nucleic Acids Res. 51 (D1) (2023)
Antonio Miranda-Escalada, Farrokh Mehryary, Jouni Luoma, Darryl Estrada-Zavala, Luis Gascó, Sampo Pyysalo, Alfonso Valencia, Martin Krallinger
Overview of DrugProt task at BioCreative VII: data and methods for large-scale text mining and knowledge graph generation of heterogenous chemical-protein relations. Database J. Biol. Databases Curation 2023 (2023)
Kai Hakala, Suwisa Kaewphan, Jari Björne, Farrokh Mehryary, Hans Moen, Martti Tolvanen, Tapio Salakoski, Filip Ginter
Neural Network and Random Forest Models in Protein Function Prediction. IEEE ACM Trans. Comput. Biol. Bioinform. 19 (3) (2022)
Farrokh Mehryary, Hans Moen, Tapio Salakoski, Filip Ginter
Entity-Pair Embeddings for Improving Relation Extraction in the Biomedical Domain. ESANN (2020)
Farrokh Mehryary, Jari Björne, Tapio Salakoski, Filip Ginter
Potent pairing: ensemble of long short-term memory networks and support vector machine for chemical-protein relation extraction. Database J. Biol. Databases Curation 2018 (2018)
Abeed Sarker, Maksim Belousov, Jasper Friedrichs, Kai Hakala, Svetlana Kiritchenko, Farrokh Mehryary, Sifei Han, Tung Tran, Anthony Rios, Ramakanth Kavuluru, Berry de Bruijn, Filip Ginter, Debanjan Mahata, Saif M. Mohammad, Goran Nenadic, Graciela Gonzalez-Hernandez
Data and systems for medication-related text classification and concept normalization from Twitter: insights from the Social Media Mining for Health (SMM4H)-2017 shared task. J. Am. Medical Informatics Assoc. 25 (10) (2018)
Hans Moen, Kai Hakala, Farrokh Mehryary, Laura-Maria Peltonen, Tapio Salakoski, Filip Ginter, Sanna Salanterä
Detecting mentions of pain and acute confusion in Finnish clinical text. BioNLP (2017)
Kai Hakala, Farrokh Mehryary, Hans Moen, Suwisa Kaewphan, Tapio Salakoski, Filip Ginter
Ensemble of Convolutional Neural Networks for Medicine Intake Recognition in Twitter. SMM4H@AMIA (2017)
Farrokh Mehryary, Kai Hakala, Suwisa Kaewphan, Jari Björne, Tapio Salakoski, Filip Ginter
End-to-End System for Bacteria Habitat Extraction. BioNLP (2017)
Farrokh Mehryary, Jari Björne, Sampo Pyysalo, Tapio Salakoski, Filip Ginter
Deep Learning with Minimal Training Data: TurkuNLP Entry in the BioNLP Shared Task 2016. BioNLP (Shared Task) (2016)
Farrokh Mehryary, Suwisa Kaewphan, Kai Hakala, Filip Ginter
Filtering large-scale event collections using a combination of supervised and unsupervised learning for event trigger classification. J. Biomed. Semant. 7 (2016)