Berry de Bruijn

Publication Activity (10 Years)

Years Active: 2000-2020
Publications (10 Years): 9

Top Topics

Umls Metathesaurus

Adverse Drug Reactions

Top Venues

J. Am. Medical Informatics Assoc.

Publications

Dave Carter, Marta Stojanovic, Philip Hachey, Kevin Fournier, Simon Rodier, Yunli Wang, Berry de Bruijn
Global Public Health Surveillance Using Media Reports: Redesigning GPHIN. MIE (2020)
Isar Nejadgholi, Kathleen C. Fraser, Berry de Bruijn
Extensive Error Analysis and a Learning-Based Evaluation of Medical Entity Recognition Systems to Approximate User Experience. CoRR (2020)
Isar Nejadgholi, Kathleen C. Fraser, Berry de Bruijn
Extensive Error Analysis and a Learning-Based Evaluation of Medical Entity Recognition Systems to Approximate User Experience. BioNLP (2020)
Dave Carter, Marta Stojanovic, Philip Hachey, Kevin Fournier, Simon Rodier, Yunli Wang, Berry de Bruijn
Global Public Health Surveillance using Media Reports: Redesigning GPHIN. CoRR (2020)
Isar Nejadgholi, Kathleen C. Fraser, Berry de Bruijn, Muqun Li, Astha LaPlante, Khaldoun Zine El Abidine
Recognizing UMLS Semantic Types with Deep Learning. LOUHI@EMNLP (2019)
Kathleen C. Fraser, Isar Nejadgholi, Berry de Bruijn, Muqun Li, Astha LaPlante, Khaldoun Zine El Abidine
Extracting UMLS Concepts from Medical Text Using General and Domain-Specific Deep Learning Models. CoRR (2019)
Svetlana Kiritchenko, Saif M. Mohammad, Jason Morin, Berry de Bruijn
NRC-Canada at SMM4H Shared Task: Classifying Tweets Mentioning Adverse Drug Reactions and Medication Intake. CoRR (2018)
Abeed Sarker, Maksim Belousov, Jasper Friedrichs, Kai Hakala, Svetlana Kiritchenko, Farrokh Mehryary, Sifei Han, Tung Tran, Anthony Rios, Ramakanth Kavuluru, Berry de Bruijn, Filip Ginter, Debanjan Mahata, Saif M. Mohammad, Goran Nenadic, Graciela Gonzalez-Hernandez
Data and systems for medication-related text classification and concept normalization from Twitter: insights from the Social Media Mining for Health (SMM4H)-2017 shared task. J. Am. Medical Informatics Assoc. 25 (10) (2018)
Svetlana Kiritchenko, Saif M. Mohammad, Jason Morin, Berry de Bruijn
NRC-Canada at SMM4H Shared Task: Classifying Tweets Mentioning Adverse Drug Reactions and Medication Intake. SMM4H@AMIA (2017)
Xiaodan Zhu, Colin Cherry, Svetlana Kiritchenko, Joel D. Martin, Berry de Bruijn
Detecting concept relations in clinical text: Insights from a state-of-the-art model. J. Biomed. Informatics 46 (2) (2013)
Colin Cherry, Xiaodan Zhu, Joel D. Martin, Berry de Bruijn
À la Recherche du Temps Perdu: extracting temporal relations from medical text in the 2012 i2b2 NLP challenge. J. Am. Medical Informatics Assoc. 20 (5) (2013)
Berry de Bruijn
Revisiting the Area Under the ROC. MIE (2011)
Berry de Bruijn, Colin Cherry, Svetlana Kiritchenko, Joel D. Martin, Xiaodan Zhu
Machine-learned solutions for three stages of clinical information extraction: the state of the art at i2b2 2010. J. Am. Medical Informatics Assoc. 18 (5) (2011)
Svetlana Kiritchenko, Berry de Bruijn, Simona Carini, Joel D. Martin, Ida Sim
ExaCT: automatic extraction of clinical trial characteristics from journal publications. BMC Medical Informatics Decis. Mak. 10 (2010)
Berry de Bruijn, Simona Carini, Svetlana Kiritchenko, Joel D. Martin, Ida Sim
Automated Information Extraction of Key Trial Design Elements from Clinical Trial Publications. AMIA (2008)
Berry de Bruijn, Ann Cranney, Siobhan O'Donnell, Joel D. Martin, Alan J. Forster
Case Report: Identifying Wrist Fracture Patients with High Accuracy by Automatic Categorization of X-ray Reports. J. Am. Medical Informatics Assoc. 13 (6) (2006)
Ian M. Donaldson, Joel D. Martin, Berry de Bruijn, Cheryl Wolting, Vicki Lay, Brigitte Tuekam, Shudong Zhang, Berivan Baskin, Gary D. Bader, Katerina Michalickova, Tony Pawson, Christopher W. V. Hogue
PreBIND and Textomy - mining the biomedical literature for protein-protein interactions using a support vector machine. BMC Bioinform. 4 (2003)
Jeffrey Demaine, Joel D. Martin, Berry de Bruijn
Haystacks and hypotheses. ASIST (2003)
Berry de Bruijn, Joel D. Martin
Finiding Gene Function using LitMiner. TREC (2003)
Berry de Bruijn, Joel D. Martin
Getting to the (c)ore of knowledge: mining biomedical literature. Int. J. Medical Informatics 67 (1-3) (2002)
Alain Désilets, Berry de Bruijn, Joel D. Martin
Extracting Keyphrases from Spoken Audio Documents. SIGIR Workshop: Information Retrieval Techniques for Speech Applications (2001)
Berry de Bruijn, Arie Hasman, Jan Willem Arends
Supporting the classification of pathology reports: comparing two information retrieval methods. Comput. Methods Programs Biomed. 62 (2) (2000)