PreBIND and Textomy - mining the biomedical literature for protein-protein interactions using a support vector machine.
Ian M. DonaldsonJoel D. MartinBerry de BruijnCheryl WoltingVicki LayBrigitte TuekamShudong ZhangBerivan BaskinGary D. BaderKaterina MichalickovaTony PawsonChristopher W. V. HoguePublished in: BMC Bioinform. (2003)
Keyphrases
- biomedical literature
- protein protein interactions
- text mining
- medical literature
- computational methods
- high throughput
- biological processes
- protein interaction
- gene ontology
- automatic extraction
- biological data
- functional modules
- systems biology
- network analysis
- structural properties
- data mining
- biological networks
- text documents
- high precision
- knowledge discovery
- database
- protein complexes
- network topology
- machine learning
- natural language processing
- information retrieval
- semantic relationships
- document clustering
- low cost
- protein interaction networks