Eduardo P. C. Rocha

Publication Activity (10 Years)

Years Active: 2002-2021
Publications (10 Years): 3

Top Topics

Subcellular Localization

Graph Theoretic

Top Venues

PLoS Comput. Biol.

Nucleic Acids Res.

Publications

Guillaume Gautreau, Adelme Bazin, Mathieu Gachet, Rémi Planel, Laura Burlot, Mathieu Dubois, Amandine Perrin, Claudine Médigue, Alexandra Calteau, Stéphane Cruveiller, Catherine Matias, Christophe Ambroise, Eduardo P. C. Rocha, David Vallenet
Correction: PPanGGOLiN: Depicting microbial diversity via a partitioned pangenome graph. PLoS Comput. Biol. 17 (12) (2021)
Guillaume Gautreau, Adelme Bazin, Mathieu Gachet, Rémi Planel, Laura Burlot, Mathieu Dubois, Amandine Perrin, Claudine Médigue, Alexandra Calteau, Stéphane Cruveiller, Catherine Matias, Christophe Ambroise, Eduardo P. C. Rocha, David Vallenet
PPanGGOLiN: Depicting microbial diversity via a partitioned pangenome graph. PLoS Comput. Biol. 16 (3) (2020)
David Couvin, Aude Bernheim, Claire Toffano-Nioche, Marie Touchon, Juraj Michalik, Bertrand Néron, Eduardo P. C. Rocha, Gilles Vergnaud, Daniel Gautheret, Christine Pourcel
CRISPRCasFinder, an update of CRISRFinder, includes a portable version, enhanced performance and integrates search for Cas proteins. Nucleic Acids Res. 46 (Webserver-Issue) (2018)
Todd J. Treangen, Aaron E. Darling, Guillaume Achaz, Mark A. Ragan, Xavier Messeguer, Eduardo P. C. Rocha
A Novel Heuristic for Local Multiple Alignment of Interspersed DNA Repeats. IEEE ACM Trans. Comput. Biol. Bioinform. 6 (2) (2009)
Anne-Laure Abraham, Joël Pothier, Eduardo P. C. Rocha
Protein evolution driven by symmetric structural repeats. BMC Bioinform. 9 (S-10) (2008)
Anne-Laure Abraham, Eduardo P. C. Rocha, Joël Pothier
Swelfe: a detector of internal repeats in sequences and structures. Bioinform. 24 (13) (2008)
Guillaume Achaz, Frédéric Boyer, Eduardo P. C. Rocha, Alain Viari, Eric Coissac
Repseek, a tool to retrieve approximate repeats from large DNA sequences. Bioinform. 23 (1) (2007)
Firas Swidan, Eduardo P. C. Rocha, Michael Shmoish, Ron Y. Pinter
An Integrative Method for Accurate Comparative Genome Mapping. PLoS Comput. Biol. 2 (8) (2006)
Guillaume Achaz, Eduardo P. C. Rocha, P. Netter, Eric Coissac
Origin and fate of repeats in bacteria. Nucleic Acids Res. 30 (13) (2002)