Guillaume Gautreau

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 6

Top Topics

Computationally Intensive

Graph Representation

Genomic Sequences

Top Venues

PLoS Comput. Biol.

Briefings Bioinform.

Publications

Jérôme Arnoux, Angela Bonifati, Alexandra Calteau, Stefania Dumbrava, Guillaume Gautreau
Integrating Complex Pangenome Graphs. ICDEW (2024)
Guillaume Gautreau, Adelme Bazin, Mathieu Gachet, Rémi Planel, Laura Burlot, Mathieu Dubois, Amandine Perrin, Claudine Médigue, Alexandra Calteau, Stéphane Cruveiller, Catherine Matias, Christophe Ambroise, Eduardo P. C. Rocha, David Vallenet
Correction: PPanGGOLiN: Depicting microbial diversity via a partitioned pangenome graph. PLoS Comput. Biol. 17 (12) (2021)
David Vallenet, Alexandra Calteau, Mathieu Dubois, Paul Amours, Adelme Bazin, Mylène Beuvin, Laura Burlot, Xavier Bussell, Stéphanie Fouteau, Guillaume Gautreau, Aurélie Lajus, Jordan Langlois, Rémi Planel, David Roche, Johan Rollin, Zoé Rouy, Valentin Sabatet, Claudine Médigue
MicroScope: an integrated platform for the annotation and exploration of microbial gene functions through genomic, pangenomic and metabolic comparative analysis. Nucleic Acids Res. 48 (Database-Issue) (2020)
Guillaume Gautreau, Adelme Bazin, Mathieu Gachet, Rémi Planel, Laura Burlot, Mathieu Dubois, Amandine Perrin, Claudine Médigue, Alexandra Calteau, Stéphane Cruveiller, Catherine Matias, Christophe Ambroise, Eduardo P. C. Rocha, David Vallenet
PPanGGOLiN: Depicting microbial diversity via a partitioned pangenome graph. PLoS Comput. Biol. 16 (3) (2020)
Claudine Médigue, Alexandra Calteau, Stéphane Cruveiller, Mathieu Gachet, Guillaume Gautreau, Adrien Josso, Aurélie Lajus, Jordan Langlois, Hugo Pereira, Rémi Planel, David Roche, Johan Rollin, Zoé Rouy, David Vallenet
MicroScope - an integrated resource for community expertise of gene functions and comparative analysis of microbial genomic and metabolic data. Briefings Bioinform. 20 (4) (2019)
Guillaume Gautreau, David Pejoski, Roger Le Grand, Antonio Cosma, Anne-Sophie Beignon, Nicolas Tchitchek
SPADEVizR: an R package for visualization, analysis and integration of SPADE results. Bioinform. 33 (5) (2017)