Alain Viari

Publication Activity (10 Years)

Years Active: 1990-2012
Publications (10 Years): 0

Top Topics

Candidate Genes

Biological Pathways

Genomic Sequences

Top Venues

Nucleic Acids Res.

PLoS Comput. Biol.

Publications

Adam Alexander Thil Smith, Eugeni Belda, Alain Viari, Claudine Médigue, David Vallenet
The CanOE Strategy: Integrating Genomic and Metabolic Contexts across Multiple Prokaryote Genomes to Find Candidate Genes for Orphan Enzymes. PLoS Comput. Biol. 8 (5) (2012)
Anne Morgat, Eric Coissac, Elisabeth Coudert, Kristian B. Axelsen, Guillaume Keller, Amos Bairoch, Alan Bridge, Lydie Bougueleret, Ioannis Xenarios, Alain Viari
UniPathway: a resource for the exploration and annotation of metabolic pathways. Nucleic Acids Res. 40 (Database-Issue) (2012)
Yves-Pol Deniélou, Marie-France Sagot, Frédéric Boyer, Alain Viari
Bacterial syntenies: an exact approach with gene quorum. BMC Bioinform. 12 (2011)
Yves-Pol Deniélou, Frédéric Boyer, Alain Viari, Marie-France Sagot
Multiple Alignment of Biological Networks: A Flexible Approach. CPM (2009)
Guillaume Achaz, Frédéric Boyer, Eduardo P. C. Rocha, Alain Viari, Eric Coissac
Repseek, a tool to retrieve approximate repeats from large DNA sequences. Bioinform. 23 (1) (2007)
Samuel Drulhe, Giancarlo Ferrari-Trecate, Hidde de Jong, Alain Viari
Reconstruction of Switching Thresholds in Piecewise-Affine Models of Genetic Regulatory Networks. HSCC (2006)
Stéphane Descorps-Declère, Danielle Ziébelin, François Rechenmann, Alain Viari
Genepi: a blackboard framework for genome annotation. BMC Bioinform. 7 (2006)
Patrick Durand, Laurent Labarre, Alain Meil, Jean-Louis Divol, Yves Vandenbrouck, Alain Viari, Jérôme Wojcik
GenoLink: a graph-based querying and browsing system for investigating the function of genes and proteins. BMC Bioinform. 7 (2006)
Frédéric Boyer, Anne Morgat, Laurent Labarre, Joël Pothier, Alain Viari
Syntons, metabolons and interactons: an exact graph-theoretical approach for exploring neighbourhood between genomic and functional data. Bioinform. 21 (23) (2005)
Alain Viari
How Does Computer Science Change Molecular Biology? STACS (2003)
Frédéric Boyer, Alain Viari
Ab initio reconstruction of metabolic pathways. ECCB (2003)
Claudine Médigue, François Rechenmann, Antoine Danchin, Alain Viari
Imagene: an integrated computer environment for sequence annotation and analysis. Bioinform. 15 (1) (1999)
V. Escalier, Joël Pothier, Henry Soldano, Alain Viari
Pairwide and Multiple Identification of Three-Dimensional Common Substructures in Proteins. J. Comput. Biol. 5 (1) (1998)
Marie-France Sagot, Alain Viari
Flexible Identification of Structural Objects in Nucleic Acid Sequences: Palindromes, Mirror Repeats, Pseudoknots and Triple Helices. CPM (1997)
Marie-France Sagot, Alain Viari, Henry Soldano
Multiple Sequence Comparison - A Peptide Matching Approach. Theor. Comput. Sci. 180 (1-2) (1997)
Marie-France Sagot, Alain Viari
A Double Combinatorial Approach to Discovering Patterns in Biological Sequences. CPM (1996)
Marie-France Sagot, Alain Viari, Henry Soldano
A Distance-Based Block Searching Algorithm. ISMB (1995)
Claudine Médigue, Thierry Vermat, Gilles Bisson, Alain Viari, Antoine Danchin
Cooperative Computer System For Genome Sequence Analysis. ISMB (1995)
Marie-France Sagot, Alain Viari, Joël Pothier, Henry Soldano
Finding flexible patterns in a text: an application to three-dimensional molecular matching. Comput. Appl. Biosci. 11 (1) (1995)
Marie-France Sagot, Alain Viari, Henry Soldano
Multiple Sequence Comparison: A Peptide Matching Approach. CPM (1995)
Henry Soldano, Alain Viari, Marc Champesme
Searching for flexible repeated patterns using a non-transitive similarity relation. Pattern Recognit. Lett. 16 (3) (1995)
E. Ollivier, Henry Soldano, Alain Viari
'Multifrequency' location and clustering of sequence patterns from proteins. Comput. Appl. Biosci. 7 (1) (1991)
Alain Viari, Henry Soldano, E. Ollivier
A scale-independent signal processing method for sequence analysis. Comput. Appl. Biosci. 6 (2) (1990)