Brandon Cook

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 37

Top Topics

Machine Learning Algorithms

Causal Networks

Benchmark Suite

Resource Utilization

Top Venues

Concurr. Comput. Pract. Exp.

Publications

Srinivas Yadav Singanaboina, Weile Wei, Isidoros Tsaousis Seiras, Panagiotis Syskakis, Bradley Richardson, Brandon Cook, Hartmut Kaiser
Accelerating LULESH using HPX - the C++ Standard Library for Parallelism and Concurrency. PEARC (2024)
Jie Li, George Michelogiannakis, Brandon Cook, John Shalf, Yong Chen
Scheduling and Allocation of Disaggregated Memory Resources in HPC Systems. IPDPS (Workshops) (2024)
George Michelogiannakis, Yehia Arafa, Brandon Cook, Liang Yuan Dai, Abdel-Hameed A. Badawy, Madeleine Glick, Yuyang Wang, Keren Bergman, John Shalf
Efficient Intra-Rack Resource Disaggregation for HPC Using Co-Packaged DWDM Photonics. CLUSTER (2023)
George Michelogiannakis, Yehia Arafa, Brandon Cook, Liang Yuan Dai, Abdel-Hameed A. Badawy, Madeleine Glick, Yuyang Wang, Keren Bergman, John Shalf
Efficient Intra-Rack Resource Disaggregation for HPC Using Co-Packaged DWDM Photonics. CoRR (2023)
Taylor L. Groves, Naveen Ravichandrasekaran, Brandon Cook, Noel Keen, David Trebotich, Nicholas J. Wright, Bob Alverson, Duncan Roweth, Keith D. Underwood
Not all applications have boring communication patterns: Profiling message matching with BMM. Concurr. Comput. Pract. Exp. 35 (15) (2023)
Jie Li, George Michelogiannakis, Brandon Cook, Dulanya Cooray, Yong Chen
Analyzing Resource Utilization in an HPC System: A Case Study of NERSC Perlmutter. CoRR (2023)
Jie Li, George Michelogiannakis, Brandon Cook, Dulanya Cooray, Yong Chen
Analyzing Resource Utilization in an HPC System: A Case Study of NERSC's Perlmutter. ISC (2023)
Jie Li, Brandon Cook, Yong Chen
ARcode: HPC Application Recognition Through Image-encoded Monitoring Data. CoRR (2023)
Pieter Maris, Chao Yang, Dossay Oryspayev, Brandon Cook
Accelerating an iterative eigensolver for nuclear structure configuration interaction calculations on GPUs using OpenACC. J. Comput. Sci. 59 (2022)
George Michelogiannakis, Benjamin Klenk, Brandon Cook, Min Yee Teh, Madeleine Glick, Larry Dennison, Keren Bergman, John Shalf
A Case For Intra-rack Resource Disaggregation in HPC. ACM Trans. Archit. Code Optim. 19 (2) (2022)
Pieter Maris, Chao Yang, Dossay Oryspayev, Brandon Cook
Accelerating an Iterative Eigensolver for Nuclear Structure Configuration Interaction Calculations on GPUs using OpenACC. CoRR (2021)
Rollin C. Thomas, Laurie Stephey, Annette Greiner, Brandon Cook
Monitoring Scientific Python Usage on a Supercomputer. SciPy (2021)
Brandon Cook, Patrick J. Fasano, Pieter Maris, Chao Yang, Dossay Oryspayev
Accelerating Quantum Many-Body Configuration Interaction with Directives. WACCPD@SC (2021)
Brandon Cook, Patrick J. Fasano, Pieter Maris, Chao Yang, Dossay Oryspayev
Accelerating quantum many-body configuration interaction with directives. CoRR (2021)
Amanda S. Dufek, Rahulkumar Gayatri, Neil A. Mehta, Douglas Doerfler, Brandon Cook, Yasaman Ghadar, Carleton DeTar
Case Study of Using Kokkos and SYCL as Performance-Portable Frameworks for Milc-Dslash Benchmark on NVIDIA, AMD and Intel GPUs. P3HPC@SC (2021)
Abhinav Bhatele, Jayaraman J. Thiagarajan, Taylor Groves, Rushil Anirudh, Staci A. Smith, Brandon Cook, David K. Lowenthal
The Case of Performance Variability on Dragonfly-based Systems. IPDPS (2020)
Yijia Zhang, Taylor Groves, Brandon Cook, Nicholas J. Wright, Ayse K. Coskun
Quantifying the impact of network congestion on application performance and network metrics. CLUSTER (2020)
Hugo Brunie, Costin Iancu, Khaled Z. Ibrahim, Philip Brisk, Brandon Cook
Tuning floating-point precision using dynamic program information and temporal locality. SC (2020)
Mahesh Balasubramanian, Trevor D. Ruiz, Brandon Cook, Prabhat, Sharmodeep Bhattacharyya, Aviral Shrivastava, Kristofer E. Bouchard
Scaling of Union of Intersections for Inference of Granger Causal Networks from Observational Data. IPDPS (2020)
Md. Afibuzzaman, Pieter Maris, Taylor Groves, Dossay Oryspayev, Brandon Cook, Chao Yang, Hasan Metin Aktulga
Evaluation of the Communication Motif for a Distributed Eigensolver using the SST Network Simulation Tool. PMBS@SC (2020)
Brandon Cook, Thorsten Kurth, Jack Deslippe, Pierre Carrier, Nick Hill, Nathan Wichmann
Eigensolver performance comparison on Cray XC systems. Concurr. Comput. Pract. Exp. 31 (16) (2019)
Vasileios Karakasis, Theofilos Manitaras, Victor Holanda Rusu, Rafael Sarmiento-Pérez, Christopher Bignamini, Matthias Kraushaar, Andreas Jocksch, Samuel Omlin, Guilherme Peretti-Pezzi, João P. S. C. Augusto, Brian Friesen, Yun (Helen) He, Lisa Gerhardt, Brandon Cook, Zhi-Qiang You, Samuel Khuvis, Karen Tomko
Enabling Continuous Testing of HPC Systems Using ReFrame. HUST/SE-HER/WIHPC@SC (2019)
Douglas Doerfler, Brian Austin, Brandon Cook, Jack Deslippe, Krishna Kandalla, Peter Mendygral
Evaluating the networking characteristics of the Cray XC-40 Intel Knights Landing-based Cori supercomputer at NERSC. Concurr. Comput. Pract. Exp. 30 (1) (2018)
Yun (Helen) He, Brandon Cook, Jack Deslippe, Brian Friesen, Richard A. Gerber, Rebecca Hartman-Baker, Alice Koniges, Thorsten Kurth, Stephen Leak, Woo-Sun Yang, Zhengji Zhao, Eddie Baron, Peter Hauschildt
Preparing NERSC users for Cori, a Cray XC40 system with Intel many integrated cores. Concurr. Comput. Pract. Exp. 30 (1) (2018)
Brian Austin, Christopher S. Daley, Douglas Doerfler, Jack Deslippe, Brandon Cook, Brian Friesen, Thorsten Kurth, Charlene Yang, Nicholas J. Wright
A Metric for Evaluating Supercomputer Performance in the Era of Extreme Heterogeneity. PMBS@SC (2018)
Mahesh Balasubramanian, Trevor D. Ruiz, Brandon Cook, Sharmodeep Bhattacharyya, Prabhat, Aviral Shrivastava, Kristofer E. Bouchard
) Algorithms for Improved Statistical Estimation at Scale. CoRR (2018)
Brandon Cook, Charlene Yang, Thorsten Kurth, Jack Deslippe
Sparse CSB_Coo Matrix-Vector and Matrix-Matrix Performance on Intel Xeon Architectures. ISC Workshops (2018)
Thorsten Kurth, William Arndt, Taylor Barnes, Brandon Cook, Jack Deslippe, Douglas Doerfler, Brian Friesen, Yun (Helen) He, Tuomas Koskela, Mathieu Lobet, Tareq M. Malas, Leonid Oliker, Andrey Ovsyannikov, Samuel Williams, Woo-Sun Yang, Zhengji Zhao
Analyzing Performance of Selected NESAP Applications on the Cori HPC System. ISC Workshops (2017)
Brandon Cook, Thorsten Kurth, Brian Austin, Samuel Williams, Jack Deslippe
Performance Variability on Xeon Phi. ISC Workshops (2017)
Marquita Ellis, Evangelos Georganas, Rob Egan, Steven A. Hofmeyr, Aydin Buluç, Brandon Cook, Leonid Oliker, Katherine A. Yelick
Performance Characterization of De Novo Genome Assembly on Leading Parallel Systems. Euro-Par (2017)
Brandon Cook, Kelly Cohen
Multi-source sensor fusion for small unmanned aircraft systems using fuzzy logic. FUZZ-IEEE (2017)
Evangelos Georganas, Marquita Ellis, Rob Egan, Steven A. Hofmeyr, Aydin Buluç, Brandon Cook, Leonid Oliker, Katherine A. Yelick
MerBench: PGAS Benchmarks for High Performance Genome Assembly. PAW@SC (2017)
Brandon Cook, Pieter Maris, Meiyue Shao, Nathan Wichmann, Marcus Wagner, John O'Neill, Thanh Phung, Gaurav Bansal
High Performance Optimizations for Nuclear Physics Code MFDn on KNL. ISC Workshops (2016)
Douglas Doerfler, Jack Deslippe, Samuel Williams, Leonid Oliker, Brandon Cook, Thorsten Kurth, Mathieu Lobet, Tareq M. Malas, Jean-Luc Vay, Henri Vincenti
Applying the Roofline Performance Model to the Intel Xeon Phi Knights Landing Processor. ISC Workshops (2016)
Alice Koniges, Brandon Cook, Jack Deslippe, Thorsten Kurth, Hongzhang Shan
MPI usage at NERSC: Present and Future. EuroMPI (2016)
Taylor Barnes, Brandon Cook, Jack Deslippe, Douglas Doerfler, Brian Friesen, Yun (Helen) He, Thorsten Kurth, Tuomas Koskela, Mathieu Lobet, Tareq M. Malas, Leonid Oliker, Andrey Ovsyannikov, Abhinav Sarje, Jean-Luc Vay, Henri Vincenti, Samuel Williams, Pierre Carrier, Nathan Wichmann, Marcus Wagner, Paul R. C. Kent, Christopher Kerr, John M. Dennis
Evaluating and Optimizing the NERSC Workload on Knights Landing. PMBS@SC (2016)
Zhaoyi Meng, Alice Koniges, Yun (Helen) He, Samuel Williams, Thorsten Kurth, Brandon Cook, Jack Deslippe, Andrea L. Bertozzi
OpenMP Parallelization and Optimization of Graph-Based Machine Learning Algorithms. IWOMP (2016)