Anatoly A. Sorokin

Publication Activity (10 Years)

Years Active: 1999-2023
Publications (10 Years): 12

Top Topics

Parameter Estimation

Machine Learning

Sequence Classification

Top Venues

J. Integr. Bioinform.

J. Bioinform. Comput. Biol.

Publications

Denis S. Zavorotnyuk, Anatoly A. Sorokin, Stanislav I. Pekov, Denis S. Bormotov, Vasiliy A. Eliferov, Konstantin V. Bocharov, Eugene N. Nikolaev, Igor A. Popov
Shapley Value as a Quality Control for Mass Spectra of Human Glioblastoma Tissues. Data 8 (1) (2023)
Anatoly A. Sorokin, Denis S. Bormotov, Denis S. Zavorotnyuk, Vasily A. Eliferov, Konstantin V. Bocharov, Stanislav I. Pekov, Evgeny N. Nikolaev, Igor A. Popov
Aggregation of Multimodal ICE-MS Data into Joint Classifier Increases Quality of Brain Cancer Tissue Classification. Data 8 (1) (2023)
Evgeny S. Zhvansky, Anatoly A. Sorokin, Denis S. Zavorotnyuk, Vsevolod Shurkhay, Vasiliy A. Eliferov, Denis S. Bormotov, Daniil G. Ivanov, Alexander A. Potapov
Comparison of different machine learning methods and dimensionality reduction for classification astrocytoma and glioblastoma tissues by mass spectra. F1000Research 10 (2021)
Evgeny S. Zhvansky, Anatoly A. Sorokin, Denis S. Bormotov, Konstantin V. Bocharov, Denis S. Zavorotnyuk, Daniil G. Ivanov, Eugene N. Nikolaev, Igor A. Popov
The software for interactive evaluation of mass spectra stability and reproducibility. Bioinform. 37 (1) (2021)
Denis S. Zavorotnyuk, Stanislav I. Pekov, Anatoly A. Sorokin, Denis S. Bormotov, Nikita Levin, Evgeny S. Zhvansky, Savva Semenov, Polina Strelnikova, Konstantin V. Bocharov, Alexander Vorobiev, Alexey S. Kononikhin, Vsevolod Shurkhay, Eugene N. Nikolaev, Igor A. Popov
Lipid Profiles of Human Brain Tumors Obtained by High-Resolution Negative Mode Ambient Mass Spectrometry. Data 6 (12) (2021)
Igor Goryanin, Anatoly A. Sorokin, Olga Vasieva
Using ASAR for Analysis of Electrogenic and Human Gut Microbial Communities. BIOINFORMATICS (2020)
Mikhail A. Orlov, Anatoly A. Sorokin
DNA sequence, physics, and promoter function: Analysis of high-throughput data On T7 promoter variants activity. J. Bioinform. Comput. Biol. 18 (2) (2020)
Adrien Rougny, Vasundra Touré, Stuart L. Moodie, Irina Balaur, Tobias Czauderna, Hanna Borlinghaus, Ugur Dogrusoz, Alexander Mazein, Andreas Dräger, Michael L. Blinov, Alice Villéger, Robin Haw, Emek Demir, Huaiyu Mi, Anatoly A. Sorokin, Falk Schreiber, Augustin Luna
Systems Biology Graphical Notation: Process Description language Level 1 Version 2.0. J. Integr. Bioinform. 16 (2) (2019)
Artem Ryasik, Mikhail A. Orlov, Evgenia Zykova, Timofei Ermak, Anatoly A. Sorokin
Bacterial promoter prediction: Selection of dynamic and static physical properties of DNA for reliable sequence classification. J. Bioinform. Comput. Biol. 16 (1) (2018)
Askarbek N. Orakov, Nazgul Sakenova, Anatoly A. Sorokin, Igor Goryanin
ASAR: visual analysis of metagenomes in R. Bioinform. 34 (8) (2018)
Askarbek N. Orakov, Nazgul Sakenova, Igor Goryanin, Anatoly A. Sorokin
ASAR Database: An R Tool for Visual Analysis and Storage of Metagenomes. BIOINFORMATICS (2018)
Anna A. Deeva, Evgenia A. Temlyakova, Anatoly A. Sorokin, Elena V. Nemtseva, Valentina A. Kratasyuk
Structural distinctions of fast and slow bacterial luciferases revealed by phylogenetic analysis. Bioinform. 32 (20) (2016)
Huaiyu Mi, Falk Schreiber, Stuart L. Moodie, Tobias Czauderna, Emek Demir, Robin Haw, Augustin Luna, Nicolas Le Novère, Anatoly A. Sorokin, Alice Villéger
Systems Biology Graphical Notation: Activity Flow language Level 1 Version 1.2 . J. Integr. Bioinform. 12 (2) (2015)
Anatoly A. Sorokin, Nicolas Le Novère, Augustin Luna, Tobias Czauderna, Emek Demir, Robin Haw, Huaiyu Mi, Stuart L. Moodie, Falk Schreiber, Alice Villéger
Systems Biology Graphical Notation: Entity Relationship language Level 1 Version 2. J. Integr. Bioinform. 12 (2) (2015)
Anatoly A. Sorokin, Oksana Sorokina, J. Douglas Armstrong
RKappa: Statistical Sampling Suite for Kappa Models. HSB (2014)
Oksana Sorokina, Anatoly A. Sorokin, J. Douglas Armstrong, Vincent Danos
A simulator for spatially extended kappa models. Bioinform. 29 (23) (2013)
Richard R. Adams, Allan Clark, Azusa Yamaguchi, Neil Hanlon, Nikos Tsorman, Shakir Ali, Galina Lebedeva, Alexey Goltsov, Anatoly A. Sorokin, Ozgur E. Akman, Carl Troein, Andrew J. Millar, Igor Goryanin, Stephen Gilmore
SBSI: an extensible distributed software infrastructure for parameter estimation in systems biology. Bioinform. 29 (5) (2013)
Martijn P. van Iersel, Alice Villéger, Tobias Czauderna, Sarah E. Boyd, Frank T. Bergmann, Augustin Luna, Emek Demir, Anatoly A. Sorokin, Ugur Dogrusöz, Yukiko Matsuoka, Akira Funahashi, Mirit I. Aladjem, Huaiyu Mi, Stuart L. Moodie, Hiroaki Kitano, Nicolas Le Novère, Falk Schreiber
Software support for SBGN maps: SBGN-ML and LibSBGN. Bioinform. 28 (15) (2012)
Oksana Sorokina, Florence Corellou, David Dauvillée, Anatoly A. Sorokin, Igor Goryanin, Steven Ball, François-Yves Bouget, Andrew J. Millar
Microarray data can predict diurnal changes of starch content in the picoalga Ostreococcus. BMC Syst. Biol. 5 (2011)
Gavin H. Thomas, Jeremy Zucker, Sandy J. Macdonald, Anatoly A. Sorokin, Igor Goryanin, Angela E. Douglas
A fragile metabolic network adapted for cooperation in the symbiotic bacterium Buchnera aphidicola. BMC Syst. Biol. 3 (2009)
Anatoly A. Sorokin, Kirill Paliy, Alexey Selkov, Oleg V. Demin, Serge Dronov, Peter Ghazal, Igor Goryanin
The Pathway Editor: A tool for managing complex biological networks. IBM J. Res. Dev. 50 (6) (2006)
Stuart L. Moodie, Anatoly A. Sorokin, Igor Goryanin, Peter Ghazal
A Graphical Notation to describe the Logical Interactions of Biological Pathways. J. Integr. Bioinform. 3 (2) (2006)
Anatoly A. Sorokin, Alexander A. Osypov, Timur R. Dzhelyadin, Petr M. Beskaravainy, Svetlana G. Kamzolova
. J. Bioinform. Comput. Biol. 4 (2) (2006)
Vladimir Sobolev, Anatoly A. Sorokin, Jaime Prilusky, Enrique E. Abola, Marvin Edelman
Automated analysis of interatomic contacts in proteins. Bioinform. 15 (4) (1999)