Ugur Dogrusöz

Publication Activity (10 Years)

Years Active: 1996-2021
Publications (10 Years): 2

Top Topics

Graph Theoretic

Top Venues

Inf. Softw. Technol.

Publications

Emre Sülün, Eray Tüzün, Ugur Dogrusöz
RSTrace+: Reviewer suggestion using software artifact traceability graphs. Inf. Softw. Technol. 130 (2021)
Emre Sülün, Eray Tüzün, Ugur Dogrusöz
Reviewer Recommendation using Software Artifact Traceability Graphs. PROMISE (2019)
Martijn P. van Iersel, Alice Villéger, Tobias Czauderna, Sarah E. Boyd, Frank T. Bergmann, Augustin Luna, Emek Demir, Anatoly A. Sorokin, Ugur Dogrusöz, Yukiko Matsuoka, Akira Funahashi, Mirit I. Aladjem, Huaiyu Mi, Stuart L. Moodie, Hiroaki Kitano, Nicolas Le Novère, Falk Schreiber
Software support for SBGN maps: SBGN-ML and LibSBGN. Bioinform. 28 (15) (2012)
Ozgun Babur, Ugur Dogrusöz, Emek Demir, Chris Sander
ChiBE: interactive visualization and manipulation of BioPAX pathway models. Bioinform. 26 (3) (2010)
Ugur Dogrusöz, Ahmet Cetintas, Emek Demir, Ozgun Babur
Algorithms for effective querying of compound graph-based pathway databases. BMC Bioinform. 10 (2009)
Ugur Dogrusöz, Erhan Giral, Ahmet Cetintas, Ali Civril, Emek Demir
A layout algorithm for undirected compound graphs. Inf. Sci. 179 (7) (2009)
Ugur Dogrusöz, Christian A. Duncan, Carsten Gutwenger, Georg Sander
Graph Drawing Contest Report. Graph Drawing (2008)
Ugur Dogrusöz, Konstantinos G. Kakoulis, Brendan Madden, Ioannis G. Tollis
On labeling in graph visualization. Inf. Sci. 177 (12) (2007)
Süleyman Cenk Sahinalp, Ugur Dogrusöz, S. Muthukrishnan
Preface. Theor. Comput. Sci. 368 (3) (2006)
Ugur Dogrusöz, E. Z. Erson, Erhan Giral, Emek Demir, Ozgun Babur, Ahmet Cetintas, R. Colak
: a Web interface for analyzing biological pathways through advanced querying and visualization. Bioinform. 22 (3) (2006)
Ugur Dogrusöz, Burkay Genç
A multi-graph approach to complexity management in interactive graph visualization. Comput. Graph. 30 (1) (2006)
Burkay Genç, Ugur Dogrusöz
A layout algorithm for signaling pathways. Inf. Sci. 176 (2) (2006)
Emek Demir, Ozgun Babur, Ugur Dogrusöz, Attila Gürsoy, A. Ayaz, Gürcan Gülesir, Gurkan Nisanci, Rengül Çetin-Atalay
An ontology for collaborative construction and analysis of cellular pathways. Bioinform. 20 (3) (2004)
Ugur Dogrusöz, Erhan Giral, Ahmet Cetintas, Ali Civril, Emek Demir
A Compound Graph Layout Algorithm for Biological Pathways. Graph Drawing (2004)
Burkay Genç, Ugur Dogrusöz
A Constrained, Force-Directed Layout Algorithm for Biological Pathways. Graph Drawing (2003)
Ugur Dogrusöz
Two-dimensional packing algorithms for layout of disconnected graphs. Inf. Sci. 143 (1-4) (2002)
Ugur Dogrusöz, Qing-Wen Feng, Brendan Madden, Michael Doorley, Arne Frick
Graph Visualization Toolkits. IEEE Computer Graphics and Applications 22 (1) (2002)
Ugur Dogrusöz, Burkay Genç
A Framework for Complexity Management in Graph Visualization. Graph Drawing (2002)
Emek Demir, Ozgun Babur, Ugur Dogrusöz, Attila Gürsoy, Gurkan Nisanci, Rengül Çetin-Atalay, Mehmet Ozturk
PATIKA: an integrated visual environment for collaborative construction and analysis of cellular pathways. Bioinform. 18 (7) (2002)
Karlis Freivalds, Ugur Dogrusöz, Paulis Kikusts
Disconnected Graph Layout and the Polyomino Packing Approach. Graph Drawing (2001)
Ugur Dogrusöz, Konstantinos G. Kakoulis, Brendan Madden, Ioannis G. Tollis
Edge Labeling in the Graph Layout Toolkit. Graph Drawing (1998)
Ugur Dogrusöz, M. S. Krishnamoorthy
Enumerating all Cycles of a Planar Graph. Parallel Algorithms Appl. 10 (1-2) (1996)
Ugur Dogrusöz, Brendan Madden, Patrick Madden
Circular Layout in the Graph Layout Toolkit. Graph Drawing (1996)