Anália Lourenço

Publication Activity (10 Years)

Years Active: 2001-2023
Publications (10 Years): 28

Top Topics

Biomedical Text Mining

Document Classification

Top Venues

Briefings Bioinform.

Database J. Biol. Databases Curation

Inf. Process. Manag.

Publications

Guillermo Blanco, Anália Lourenço
A multilayered graph-based framework to explore behavioural phenomena in social media conversations. Int. J. Medical Informatics 179 (2023)
Rubén Yáñez Martínez, Guillermo Blanco, Anália Lourenço
Spanish Corpora of tweets about COVID-19 vaccination for automatic stance detection. Inf. Process. Manag. 60 (3) (2023)
Martín Pérez-Pérez, Tânia Ferreira, Anália Lourenço, Gilberto Igrejas, Florentino Fdez-Riverola
Boosting biomedical document classification through the use of domain entity recognizers and semantic ontologies for document representation: The case of gluten bibliome. Neurocomputing 484 (2022)
Guillermo Blanco, Anália Lourenço
Optimism and pessimism analysis using deep learning on COVID-19 related twitter conversations. Inf. Process. Manag. 59 (3) (2022)
Guillermo Blanco, Borja Sánchez, Lorena Ruiz, Florentino Fdez-Riverola, Abelardo Margolles, Anália Lourenço
Computational Approach to the Systematic Prediction of Glycolytic Abilities: Looking Into Human Microbiota. IEEE ACM Trans. Comput. Biol. Bioinform. 18 (6) (2021)
Augusto Ramoa, Jorge Condeço, Florentino Fdez-Riverola, Anália Lourenço
HaemoKBS: A knowledge-based system for real-time, continuous categorisation of adverse reactions in blood recipients. Neurocomputing 423 (2021)
Beatriz T. Magalhães, Anália Lourenço, Nuno F. Azevedo
Computational resources and strategies to assess single-molecule dynamics of the translation process in S. cerevisiae. Briefings Bioinform. 22 (1) (2021)
Martín Pérez-Pérez, Gilberto Igrejas, Florentino Fdez-Riverola, Anália Lourenço
A framework to extract biomedical knowledge from gluten-related tweets: The case of dietary concerns in digital era. Artif. Intell. Medicine 118 (2021)
Gael Pérez Rodríguez, Martín Pérez-Pérez, Florentino Fdez-Riverola, Anália Lourenço
Mining the sociome for Health Informatics: Analysis of therapeutic lifestyle adherence of diabetic patients in Twitter. Future Gener. Comput. Syst. 110 (2020)
Gael Pérez Rodríguez, Beatriz T. Magalhães, Nuno F. Azevedo, Anália Lourenço
Application of Agent-Based Modelling to Simulate Ribosome Translation. PAAMS (2020)
Martín Pérez-Pérez, Anália Lourenço, Gilberto Igrejas, Florentino Fdez-Riverola
A Health-Related Study from Food Online Reviews. The Case of Gluten-Free Foods. PACBB (2020)
Guillermo Blanco, Roi Pérez-López, Florentino Fdez-Riverola, Anália Lourenço
Understanding the social evolution of the Java community in Stack Overflow: A 10-year study of developer interactions. Future Gener. Comput. Syst. 105 (2020)
Roi Pérez-López, Guillermo Blanco, Florentino Fdez-Riverola, Anália Lourenço
The Activity of Bioinformatics Developers and Users in Stack Overflow. PACBB (2020)
Paulo Maia, Gael Pérez Rodríguez, Martín Pérez-Pérez, Florentino Fdez-Riverola, Anália Lourenço, Nuno F. Azevedo
. Comput. Biol. Medicine 107 (2019)
Martín Pérez-Pérez, Gael Pérez Rodríguez, Aitor Blanco-Míguez, Florentino Fdez-Riverola, Alfonso Valencia, Martin Krallinger, Anália Lourenço
Next generation community assessment of biomedical entity recognition web servers: metrics, performance, interoperability aspects of BeCalm. J. Cheminformatics 11 (1) (2019)
Gael Pérez Rodríguez, Martín Pérez-Pérez, Florentino Fdez-Riverola, Anália Lourenço
Online visibility of software-related web sites: The case of biomedical text mining tools. Inf. Process. Manag. 56 (3) (2019)
Aitor Blanco-Míguez, Guillermo Blanco, Alberto Gutiérrez-Jácome, Florentino Fdez-Riverola, Borja Sánchez, Anália Lourenço
Computational prediction of the bioactivity potential of proteomes based on expert knowledge. J. Biomed. Informatics 91 (2019)
Hugo López-Fernández, Aitor Blanco-Míguez, Florentino Fdez-Riverola, Borja Sánchez, Anália Lourenço
DEWE: A novel tool for executing differential expression RNA-Seq workflows in biomedical research. Comput. Biol. Medicine 107 (2019)
Aitor Blanco-Míguez, Florentino Fdez-Riverola, Borja Sánchez, Anália Lourenço
Resources and tools for the high-throughput, multi-omic study of intestinal microbiota. Briefings Bioinform. 20 (3) (2019)
Ander Intxaurrondo, Martín Pérez-Pérez, Gael Pérez Rodríguez, Jose Antonio López-Martín, Jesus Santamaría, Santiago de la Peña, Marta Villegas, Saber Ahmad Akhondi, Alfonso Valencia, Anália Lourenço, Martin Krallinger
The Biomedical Abbreviation Recognition and Resolution (BARR) Track: Benchmarking, Evaluation and Importance of Abbreviation Recognition Systems Applied to Spanish Biomedical Abstracts. IberEval@SEPLN (2017)
Aitor Blanco-Míguez, Florentino Fdez-Riverola, Anália Lourenço, Borja Sánchez
P4P: a peptidome-based strain-level genome comparison web tool. Nucleic Acids Res. 45 (Webserver-Issue) (2017)
Martín Pérez-Pérez, Gael Pérez Rodríguez, Florentino Fdez-Riverola, Anália Lourenço
Collaborative relation annotation and quality analysis in Markyt environment. Database J. Biol. Databases Curation 2017 (2017)
Aitor Blanco-Míguez, Alberto Gutiérrez-Jácome, Florentino Fdez-Riverola, Anália Lourenço, Borja Sánchez
MAHMI database: a comprehensive MetaHit-based resource for the study of the mechanism of action of the human microbiota. Database J. Biol. Databases Curation 2017 (2017)
Paula Jorge, Martín Pérez-Pérez, Gael Pérez Rodríguez, Florentino Fdez-Riverola, Maria Olívia Pereira, Anália Lourenço
Construction of antimicrobial peptide-drug combination networks from scientific literature based on a semi-automated curation workflow. Database J. Biol. Databases Curation 2016 (2016)
Denise Gameiro, Martín Pérez-Pérez, Gael Pérez Rodríguez, Gonçalo Monteiro, Nuno F. Azevedo, Anália Lourenço
Computational resources and strategies to construct single-molecule metabolic models of microbial cells. Briefings Bioinform. 17 (5) (2016)
Alberto G. Jácome, Florentino Fdez-Riverola, Anália Lourenço
BIOMedical Search Engine Framework: Lightweight and customized implementation of domain-specific biomedical search engines. Comput. Methods Programs Biomed. 131 (2016)
Aitor Blanco-Míguez, Jan P. Meier-Kolthoff, Alberto Gutiérrez-Jácome, Markus Göker, Florentino Fdez-Riverola, Borja Sánchez, Anália Lourenço
Improving Phylogeny Reconstruction at the Strain Level Using Peptidome Datasets. PLoS Comput. Biol. 12 (12) (2016)
Martín Pérez-Pérez, Gael Pérez Rodríguez, Obdulia Rabal, Miguel Vazquez, Julen Oyarzabal, Florentino Fdez-Riverola, Alfonso Valencia, Martin Krallinger, Anália Lourenço
The Markyt visualisation, prediction and benchmark platform for chemical and gene entity recognition at BioCreative/CHEMDNER challenge. Database J. Biol. Databases Curation 2016 (2016)
Martín Pérez-Pérez, Daniel Glez-Peña, Florentino Fdez-Riverola, Anália Lourenço
Marky: A tool supporting annotation consistency in multi-user and iterative document annotation projects. Comput. Methods Programs Biomed. 118 (2) (2015)
Alberto G. Jácome, Florentino Fdez-Riverola, Anália Lourenço
A Novel Search Engine Supporting Specific Drug Queries and Literature Management. PACBB (2015)
Gael Pérez Rodríguez, Daniel Glez-Peña, Nuno F. Azevedo, Maria Olívia Pereira, Florentino Fdez-Riverola, Anália Lourenço
Enabling systematic, harmonised and large-scale biofilms data computation: The Biofilms Experiment Workbench. Comput. Methods Programs Biomed. 118 (3) (2015)
Ana Margarida Sousa, Maria Olívia Pereira, Anália Lourenço
MorphoCol: An ontology-based knowledgebase for the characterisation of clinically significant bacterial colony morphologies. J. Biomed. Informatics 55 (2015)
Nadine Castelhano Santos, Maria Olívia Pereira, Anália Lourenço
Pathogenicity phenomena in three model systems: from network mining to emerging system-level properties. Briefings Bioinform. 16 (1) (2015)
Ana Margarida Sousa, Maria Olívia Pereira, Nuno F. Azevedo, Anália Lourenço
Designing an Ontology Tool for the Unification of Biofilms Data. PACBB (2014)
Martín Pérez-Pérez, Daniel Glez-Peña, Florentino Fdez-Riverola, Anália Lourenço
Marky: A Lightweight Web Tracking Tool for Document Annotation. PACBB (2014)
Artemy Kolchinsky, Anália Lourenço, Heng-Yi Wu, Lang Li, Luis Mateus Rocha
Extraction of Pharmacokinetic Evidence of Drug-drug Interactions from the Literature. CoRR (2014)
José Ferrnandes, Anália Lourenço
Bringing Named Entity Recognition on Drupal Content Management System. PACBB (2014)
Gael Pérez Rodríguez, Daniel Glez-Peña, Nuno F. Azevedo, Maria Olívia Pereira, Florentino Fdez-Riverola, Anália Lourenço
BEW: Bioinformatics Workbench for Analysis of Biofilms Experimental Data. PACBB (2014)
Paula Jorge, Maria Olívia Pereira, Anália Lourenço
Networking the Way towards Antimicrobial Combination Therapies. PACBB (2014)
Ana Margarida Sousa, Maria Olívia Pereira, Nuno F. Azevedo, Anália Lourenço
An harmonised vocabulary for communicating and interchanging Biofilms experimental results. J. Integr. Bioinform. 11 (3) (2014)
Daniel Glez-Peña, Anália Lourenço, Hugo López-Fernández, Miguel Reboiro-Jato, Florentino Fdez-Riverola
Web scraping technologies in an API world. Briefings Bioinform. 15 (5) (2014)
Alberto Simões, Anália Lourenço, José João Almeida
Evaluating Web Site Structure Based on Navigation Profiles and Site Topology. WorldCIST (2013)
Artemy Kolchinsky, Anália Lourenço, Lang Li, Luis Mateus Rocha
Evaluation of Linear Classifiers on Articles Containing Pharmacokinetic Evidence of Drug-Drug Interactions. Pacific Symposium on Biocomputing (2013)
Augusto Ramoa, Salomé Maia, Anália Lourenço
A Rational Framework for Production Decision Making in Blood Establishments. J. Integr. Bioinform. 9 (3) (2012)
Ana Margarida Sousa, Anália Lourenço, Maria Olívia Pereira
MorphoCol: A Powerful Tool for the Clinical Profiling of Pathogenic Bacteria. PACBB (2012)
Artemy Kolchinsky, Anália Lourenço, Lang Li, Luis Mateus Rocha
Evaluation of linear classifiers on articles containing pharmacokinetic evidence of drug-drug interactions CoRR (2012)
Lynette Hirschman, Gully A. P. C. Burns, Martin Krallinger, Cecilia N. Arighi, K. Bretonnel Cohen, Alfonso Valencia, Cathy H. Wu, Andrew Chatr-aryamontri, Karen G. Dowell, Eva Huala, Anália Lourenço, Robert S. Nash, Anne-Lise Veuthey, Thomas C. Wiegers, Andrew G. Winter
Text mining for the biocuration workflow. Database J. Biol. Databases Curation 2012 (2012)
Ana Margarida Sousa, Andreia Ferreira, Nuno F. Azevedo, Maria Olívia Pereira, Anália Lourenço
Computational approaches to standard-compliant biofilm data for reliable analysis and integration. J. Integr. Bioinform. 9 (3) (2012)
Anália Lourenço, Michael D. Conover, Andrew Wong, Azadeh Nematzadeh, Fengxia Pan, Hagit Shatkay, Luis Mateus Rocha
Correction: A linear classifier based on entity recognition tools and a statistical approach to method extraction in the protein-protein interaction literature. BMC Bioinform. 13 (2012)
Anália Lourenço, Andreia Ferreira, Maria Olívia Pereira, Nuno F. Azevedo
A Systematic Approach to the Interrogation and Sharing of Standardised Biofilm Signatures. PACBB (2012)
Augusto Ramoa, Salomé Maia, Anália Lourenço
SAD_BaSe: A Blood Bank Data Analysis Software. PACBB (2012)
Anália Lourenço, Sónia Carneiro, José P. Pinto, Miguel Rocha, Eugénio C. Ferreira, Isabel Rocha
A Study of the Short and Long-term Regulation of E. coli Metabolic Pathways. J. Integr. Bioinform. 8 (3) (2011)
Anália Lourenço, Michael D. Conover, Andrew Wong, Azadeh Nematzadeh, Fengxia Pan, Hagit Shatkay, Luis Mateus Rocha
A linear classifier based on entity recognition tools and a statistical approach to method extraction in the protein-protein interaction literature. BMC Bioinform. 12 (S-8) (2011)
Rafael Carreira, Sónia Carneiro, Rui Pereira, Miguel Rocha, Isabel Rocha, Eugénio C. Ferreira, Anália Lourenço
Semantic annotation of biological concepts interplaying microbial cellular responses. BMC Bioinform. 12 (2011)
Anália Lourenço, Sónia Carneiro, José P. Pinto, Miguel Rocha, Eugénio C. Ferreira, Isabel Rocha
Metabolic Pathways. PACBB (2011)
Anália Lourenço, Sónia Carneiro, Miguel Rocha, Eugénio C. Ferreira, Isabel Rocha
molecular biology data. Briefings Bioinform. 12 (2) (2011)
Anália Lourenço, Michael D. Conover, Andrew Wong, Azadeh Nematzadeh, Fengxia Pan, Hagit Shatkay, Luis Mateus Rocha
A Linear Classifier Based on Entity Recognition Tools and a Statistical Approach to Method Extraction in the Protein-Protein Interaction Literature CoRR (2011)
Anália Lourenço, Rafael Carreira, Daniel Glez-Peña, José Ramon Méndez, Sónia Carneiro, Luis Mateus Rocha, Fernando Díaz, Eugénio C. Ferreira, Isabel Rocha, Florentino Fdez-Riverola, Miguel Rocha
BioDR: Semantic indexing networks for biomedical document retrieval. Expert Syst. Appl. 37 (4) (2010)
Anália Lourenço, Rafael Carreira, Sónia Carneiro, Paulo Maia, Daniel Glez-Peña, Florentino Fdez-Riverola, Eugénio C. Ferreira, Isabel Rocha, Miguel Rocha
@Note: A workbench for Biomedical Text Mining. J. Biomed. Informatics 42 (4) (2009)
Anália Lourenço, Sónia Carneiro, Eugénio C. Ferreira, Rafael Carreira, Luis Mateus Rocha, Daniel Glez-Peña, José Ramon Méndez, Florentino Fdez-Riverola, Fernando Díaz, Isabel Rocha, Miguel Rocha
Biomedical Text Mining Applied to Document Retrieval and Semantic Indexing. IWANN (2) (2009)
Rui Mendes, Anália Lourenço, Sónia Carneiro, Miguel Rocha, Isabel Rocha, Eugénio C. Ferreira
A framework for the integrated analysis of metabolic and regulatory networks. BIBE (2008)
Anália Lourenço, Rafael Carreira, Sónia Carneiro, Paulo Maia, Daniel Glez-Peña, Florentino Fdez-Riverola, Eugénio C. Ferreira, Isabel Rocha, Miguel Rocha
A framework for the development of Biomedical Text Mining software tools. BIBE (2008)
José P. Pinto, Oscar Días, Anália Lourenço, Sónia Carneiro, Eugénio C. Ferreira, Isabel Rocha, Miguel Rocha
Data Integration Issues in the Reconstruction of the Genome-Scale Metabolic Model of Zymomonas Mobillis. IWPACBB (2008)
Anália Lourenço, Orlando Belo
Applying Clickstream Data Mining to Real-Time Web Crawler Detection and Containment Using ClickTips Platform. GfKl (2006)
Anália Lourenço, Orlando Belo
Catching web crawlers in the act. ICWE (2006)
Anália Lourenço, Orlando Belo
Attenuating the Effect of Data Abnormalities on Data Warehouses. ICEIS (1) (2004)
Anália Lourenço, Orlando Belo
Utilização de Agentes na Identificação e Resolução de Situações Anómales em Processos de Povoamento de Data Warehouses. JISBD (2003)
Anália Lourenço, Orlando Belo
Assessing Web Usage Profiles. ICWI (2003)
Anália Lourenço, Joaquim Gonçalves, Orlando Belo
Agent-Based Knowledge Extraction Services Inside Enterprise Data Warehousing Systems Environments. DEXA Workshop (2001)
Joaquim Gonçalves, Anália Lourenço, Orlando Belo
Specializing Agents on Data Integration in Data Warehousing System Environment. ICEIS (1) (2001)
J. Velez, Anália Lourenço, C. Pechirra, L. Almeida
Broadband access technologies. Workshop on Universal Accessibility of Ubiquitous Computing (2001)