Daniel Glez-Peña

Publication Activity (10 Years)

Years Active: 2006-2023
Publications (10 Years): 20

Top Topics

Mass Spectrometry

Software Application

University Level

Microarray Classification

Top Venues

Comput. Methods Programs Biomed.

Decis. Support Syst.

Publications

María José Jiménez-Santos, Alba Nogueira-Rodríguez, Elena Piñeiro-Yáñez, Hugo López-Fernández, Santiago García-Martín, Paula Gómez-Plana, Miguel Reboiro-Jato, Gonzalo Gómez-López, Daniel Glez-Peña, Fátima Al-Shahrour
PanDrugs2: prioritizing cancer therapies using integrated individual multi-omics data. Nucleic Acids Res. 51 (W1) (2023)
Alba Nogueira-Rodríguez, Rubén Domínguez-Carbajales, Fernando Campos-Tato, Jesús Herrero, Manuel Puga, David Remedios, Laura Rivas, Eloy Sánchez, Águeda Iglesias, Joaquín Cubiella, Florentino Fdez-Riverola, Hugo López-Fernández, Miguel Reboiro-Jato, Daniel Glez-Peña
Real-time polyp detection model using convolutional neural networks. Neural Comput. Appl. 34 (13) (2022)
Kevin Troulé, Hugo López-Fernández, Santiago García-Martín, Miguel Reboiro-Jato, Carlos Carretero-Puche, Jordi Martorell-Marugan, Guillermo Martín-Serrano, Pedro Carmona-Saez, Daniel Glez-Peña, Fátima Al-Shahrour, Gonzalo Gómez-López
DREIMT: a drug repositioning database and prioritization tool for immunomodulation. Bioinform. 37 (4) (2021)
Alba Nogueira-Rodríguez, Rubén Domínguez-Carbajales, Hugo López-Fernández, Águeda Iglesias, Joaquín Cubiella, Florentino Fdez-Riverola, Miguel Reboiro-Jato, Daniel Glez-Peña
Deep Neural Networks approaches for detecting and classifying colorectal polyps. Neurocomputing 423 (2021)
Hugo López-Fernández, Osvaldo Graña-Castro, Alba Nogueira-Rodríguez, Miguel Reboiro-Jato, Daniel Glez-Peña
Compi: a framework for portable and reproducible pipelines. PeerJ Comput. Sci. 7 (2021)
Alba Nogueira-Rodríguez, Hugo López-Fernández, Osvaldo Graña-Castro, Miguel Reboiro-Jato, Daniel Glez-Peña
Compi Hub: A Public Repository for Sharing and Discovering Compi Pipelines. PACBB (2020)
Alba Nogueira-Rodríguez, Hugo López-Fernández, Daniel Glez-Peña
Deep Learning Techniques for Real Time Computer-Aided Diagnosis in Colorectal Cancer. DCAI (Special Sessions) (2019)
Osvaldo Graña-Castro, Hugo López-Fernández, Florentino Fdez-Riverola, Fátima Al-Shahrour, Daniel Glez-Peña
Proposal of a New Bioinformatics Pipeline for Metataxonomics in Precision Medicine. PACBB (2019)
Osvaldo Graña, Hugo López-Fernández, Florentino Fdez-Riverola, David G. Pisano, Daniel Glez-Peña
Bicycle: a bioinformatics pipeline to analyze bisulfite sequencing data. Bioinform. 34 (8) (2018)
Hugo López-Fernández, Jose E. Araújo, Susana Jorge, Daniel Glez-Peña, Miguel Reboiro-Jato, Hugo Miguel Santos, Florentino Fdez-Riverola, José L. Capelo
S2P: A software tool to quickly carry out reproducible biomedical research projects involving 2D-gel and MALDI-TOF MS protein data. Comput. Methods Programs Biomed. 155 (2018)
Fernando Aparicio, Maria de la Luz Morales-Botello, Margarita Rubio, Asunción Hernando, Rafael Muñoz, Hugo López-Fernández, Daniel Glez-Peña, Florentino Fdez-Riverola, Manuel de la Villa, Manuel J. Maña López, Diego Gachet, Manuel de Buenaga Rodríguez
Perceptions of the use of intelligent information access systems in university level active learning activities among teachers of biomedical subjects. Int. J. Medical Informatics 112 (2018)
Hugo López-Fernández, Jose E. Araújo, Daniel Glez-Peña, Miguel Reboiro-Jato, Florentino Fdez-Riverola, José Luis Capelo-Martínez
S2P: A Desktop Application for Fast and Easy Processing of 2D-Gel and MALDI-Based Mass Spectrometry Protein Data. PACBB (2017)
Miriam Rubio-Camarillo, Hugo López-Fernández, Gonzalo Gómez-López, Angel Carro, José María Fernández, Coral Fustero Torre, Florentino Fdez-Riverola, Daniel Glez-Peña
RUbioSeq+: A multiplatform application that executes parallelized pipelines to analyse next-generation sequencing data. Comput. Methods Programs Biomed. 138 (2017)
Hugo López-Fernández, Gustavo de S. Pessôa, Marco A. Z. Arruda, José Luis Capelo-Martínez, Florentino Fdez-Riverola, Daniel Glez-Peña, Miguel Reboiro-Jato
LA-iMageS: a software for elemental distribution bioimaging using LA-ICP-MS data. J. Cheminformatics 8 (1) (2016)
Miriam Rubio-Camarillo, Hugo López-Fernández, Gonzalo Gómez-López, Angel Carro, José María Fernández, Florentino Fdez-Riverola, Daniel Glez-Peña, David G. Pisano
RUbioSeq+: An Application that Executes Parallelized Pipelines to Analyse Next-Generation Sequencing Data. PACBB (2016)
H. J. Gómez-Vallejo, B. Uriel-Latorre, M. Sande-Meijide, B. Villamarín-Bello, Reyes Pavón, Florentino Fernández Riverola, Daniel Glez-Peña
A case-based reasoning system for aiding detection and classification of nosocomial infections. Decis. Support Syst. 84 (2016)
Martín Pérez-Pérez, Daniel Glez-Peña, Florentino Fdez-Riverola, Anália Lourenço
Marky: A tool supporting annotation consistency in multi-user and iterative document annotation projects. Comput. Methods Programs Biomed. 118 (2) (2015)
Hugo López-Fernández, Hugo Miguel Santos, José L. Capelo, Florentino Fdez-Riverola, Daniel Glez-Peña, Miguel Reboiro-Jato
Mass-Up: an all-in-one open software application for MALDI-TOF mass spectrometry knowledge discovery. BMC Bioinform. 16 (2015)
Gael Pérez Rodríguez, Daniel Glez-Peña, Nuno F. Azevedo, Maria Olívia Pereira, Florentino Fdez-Riverola, Anália Lourenço
Enabling systematic, harmonised and large-scale biofilms data computation: The Biofilms Experiment Workbench. Comput. Methods Programs Biomed. 118 (3) (2015)
Osvaldo Graña, Miriam Rubio-Camarillo, Florentino Fdez-Riverola, David G. Pisano, Daniel Glez-Peña
A New Bioinformatic Pipeline to Address the Most Common Requirements in RNA-seq Data Analysis. PACBB (2015)
Martín Pérez-Pérez, Daniel Glez-Peña, Florentino Fdez-Riverola, Anália Lourenço
Marky: A Lightweight Web Tracking Tool for Document Annotation. PACBB (2014)
Hugo López-Fernández, Miguel Reboiro-Jato, Daniel Glez-Peña, Florentino Fernández Riverola
A comprehensive analysis about the influence of low-level preprocessing techniques on mass spectrometry data for sample classification. Int. J. Data Min. Bioinform. 10 (4) (2014)
Miguel Reboiro-Jato, Fernando Díaz, Daniel Glez-Peña, Florentino Fdez-Riverola
A novel ensemble of classifiers that use biological relevant gene sets for microarray classification. Appl. Soft Comput. 17 (2014)
Gael Pérez Rodríguez, Daniel Glez-Peña, Nuno F. Azevedo, Maria Olívia Pereira, Florentino Fdez-Riverola, Anália Lourenço
BEW: Bioinformatics Workbench for Analysis of Biofilms Experimental Data. PACBB (2014)
Daniel Glez-Peña, Anália Lourenço, Hugo López-Fernández, Miguel Reboiro-Jato, Florentino Fdez-Riverola
Web scraping technologies in an API world. Briefings Bioinform. 15 (5) (2014)
Hugo López-Fernández, Miguel Reboiro-Jato, Daniel Glez-Peña, Fernando Aparicio, Diego Gachet, Manuel Buenaga, Florentino Fdez-Riverola
BioAnnote: A software platform for annotating biomedical documents with application in medical learning environments. Comput. Methods Programs Biomed. 111 (1) (2013)
Miguel Reboiro-Jato, Rosalía Laza, Hugo López-Fernández, Daniel Glez-Peña, Fernando Díaz, Florentino Fdez-Riverola
genEnsemble: A new model for the combination of classifiers and integration of biological knowledge applied to genomic data. Expert Syst. Appl. 40 (1) (2013)
Hugo López-Fernández, Miguel Reboiro-Jato, Sara C. Madeira, Rubén López-Cortés, J. D. Nunes-Miranda, Hugo Miguel Santos, Florentino Fdez-Riverola, Daniel Glez-Peña
A Workflow for the Application of Biclustering to Mass Spectrometry Data. PACBB (2013)
Miguel Reboiro-Jato, Daniel Glez-Peña, Fernando Díaz, Florentino Fdez-Riverola
A novel ensemble approach for multicategory classification of DNA microarray data using biological relevant gene sets. Int. J. Data Min. Bioinform. 6 (6) (2012)
Hugo López-Fernández, Daniel Glez-Peña, Miguel Reboiro-Jato, Gonzalo Gómez-López, David G. Pisano, Florentino Fdez-Riverola
Applying AIBench Framework to Develop Rich User Interfaces in NGS Studies. PACBB (2012)
Diego Calvo-Dmgz, Juan F. Gálvez, Daniel Glez-Peña, Florentino Fdez-Riverola
Biological Knowledge Integration in DNA Microarray Gene Expression Classification Based on Rough Set Theory. PACBB (2012)
Diego Calvo-Dmgz, Juan F. Gálvez, Daniel Glez-Peña, Silvana Gómez Meire, Florentino Fdez-Riverola
Using Variable Precision Rough Set for Selection and Classification of Biological Knowledge Integrated in DNA Gene Expression. J. Integr. Bioinform. 9 (3) (2012)
Florentino Fdez-Riverola, Daniel Glez-Peña, Hugo López-Fernández, Miguel Reboiro-Jato, José Ramon Méndez
A JAVA application framework for scientific software development. Softw. Pract. Exp. 42 (8) (2012)
Daniel Glez-Peña, Gonzalo Gómez-López, Miguel Reboiro-Jato, Florentino Fdez-Riverola, David G. Pisano
PileLine: a toolbox to handle genome position information in next-generation sequencing studies. BMC Bioinform. 12 (2011)
Hugo López-Fernández, Miguel Reboiro-Jato, Daniel Glez-Peña, José Ramón Méndez Reboredo, Hugo Miguel Santos, Ricardo Jorge Carreira, José Luis Capelo-Martínez, Florentino Fdez-Riverola
Rapid development of proteomic applications with the AIBench framework. J. Integr. Bioinform. 8 (3) (2011)
Miguel Reboiro-Jato, Daniel Glez-Peña, José Ramón Méndez Reboredo, Hugo Miguel Santos, Ricardo Jorge Carreira, José L. Capelo, Florentino Fdez-Riverola
Building Proteomics Applications with the AIBench Application Framework. PACBB (2011)
Hugo López-Fernández, Daniel Glez-Peña, Miguel Reboiro-Jato, Gonzalo Gómez-López, David G. Pisano, Florentino Fdez-Riverola
PileLineGUI: a desktop environment for handling genome position files in next-generation sequencing studies. Nucleic Acids Res. 39 (Web-Server-Issue) (2011)
Daniel Glez-Peña, Miguel Reboiro-Jato, Florentino Fdez-Riverola, David G. Pisano, Gonzalo Gómez-López
An Intuitive Workflow to Retrieve Somatic Mutations in Next Generation Sequencing Studies. PACBB (2011)
Daniel Glez-Peña, Osvaldo Graña, Florentino Fdez-Riverola, David G. Pisano
Building a GATK-Based Tool for Methylation Analysis in Next-Generation Bisulfite Sequencing Experiments. PACBB (2011)
Juan Manuel Córdoba, Manuel J. Maña López, Noa P. Cruz Díaz, Jacinto Mata, Fernando Aparicio, Manuel de Buenaga Rodríguez, Daniel Glez-Peña, Florentino Fdez-Riverola
Medical-Miner at TREC 2011 Medical Records Track. TREC (2011)
Miguel Reboiro-Jato, Julia Glez-Dopazo, D. Glez, Rosalía Laza, Juan F. Gálvez, Reyes Pavón, Daniel Glez-Peña, Florentino Fdez-Riverola
Using inductive learning to assess compound feed production in cooperative poultry farms. Expert Syst. Appl. 38 (11) (2011)
Héctor Gómez, Daniel Glez-Peña, Miguel Reboiro-Jato, Reyes Pavón, Fernando Díaz, Florentino Fdez-Riverola
An Experimental Evaluation of a Novel Stochastic Method for Iterative Class Discovery on Real Microarray Datasets. IWPACBB (2010)
Daniel Glez-Peña, Miguel Reboiro-Jato, Paulo Maia, Miguel Rocha, Fernando Díaz, Florentino Fdez-Riverola
AIBench: A rapid application development framework for translational research in biomedicine. Comput. Methods Programs Biomed. 98 (2) (2010)
Daniel Glez-Peña, Marta Pérez-Fernández, Miguel Reboiro-Jato, Florentino Fdez-Riverola, Marta Pérez, Fernando Díaz
Incorporating biological knowledge to microarray data classification through genomic data fusion. FUSION (2010)
Daniel Glez-Peña, Miguel Reboiro-Jato, Rubén Domínguez, Gonzalo Gómez-López, David G. Pisano, Florentino Fdez-Riverola
PathJam: a new service for integrating biological pathway information. J. Integr. Bioinform. 7 (1) (2010)
Daniel Glez-Peña
Resumen de Tesis: Model for explicit biological knowledge integration in DNA microarray gene expression classification. Inteligencia Artif. 14 (45) (2010)
Daniel Glez-Peña, Daniel Gómez-Blanco, Miguel Reboiro-Jato, Florentino Fdez-Riverola, David Posada
ALTER: program-oriented conversion of DNA and protein alignments. Nucleic Acids Res. 38 (Web-Server-Issue) (2010)
Miguel Reboiro-Jato, Daniel Glez-Peña, Juan F. Gálvez, Rosalía Laza, Fernando Díaz, Florentino Fdez-Riverola
A Comparative Study of Microarray Data Classification Methods Based on Ensemble Biological Relevant Gene Sets. IWPACBB (2010)
Miguel Reboiro-Jato, Daniel Glez-Peña, Hugo Miguel Santos, Mário S. Diniz, Carlos Lodeiro, José L. Capelo, Florentino Fdez-Riverola
Multi-agent System for Mass Spectrometry Analysis. PAAMS (Special Sessions and Workshops) (2010)
Manuel de Buenaga Rodríguez, Florentino Fdez-Riverola, Manuel J. Maña López, Enrique Puertas Sanz, Daniel Glez-Peña, Jacinto Mata
Medical-Miner: Integración de conocimiento textual explícito en técnicas de minería de datos para la creación de herramientas traslacionales en medicina. Proces. del Leng. Natural 45 (2010)
Miguel Reboiro-Jato, Daniel Glez-Peña, Rubén Domínguez, Gonzalo Gómez-López, David G. Pisano, Celso Campos, Florentino Fdez-Riverola
PathAgent: Multi-agent System for Updated Pathway Information Integration. PAAMS (Special Sessions and Workshops) (2010)
Anália Lourenço, Rafael Carreira, Daniel Glez-Peña, José Ramon Méndez, Sónia Carneiro, Luis Mateus Rocha, Fernando Díaz, Eugénio C. Ferreira, Isabel Rocha, Florentino Fdez-Riverola, Miguel Rocha
BioDR: Semantic indexing networks for biomedical document retrieval. Expert Syst. Appl. 37 (4) (2010)
Daniel Glez-Peña, Fernando Díaz, Jesús M. Hernández, Juan M. Corchado, Florentino Fdez-Riverola
geneCBR: a translational tool for multiple-microarray analysis and integrative information retrieval for aiding diagnosis in cancer research. BMC Bioinform. 10 (2009)
Daniel Glez-Peña, Rodrigo Álvarez, Fernando Díaz, Florentino Fdez-Riverola
DFP: a Bioconductor package for fuzzy profile identification and gene reduction of microarray data. BMC Bioinform. 10 (2009)
Daniel Glez-Peña, Julia Glez-Dopazo, Reyes Pavón, Rosalía Laza, Florentino Fdez-Riverola
geneSetFinder: A Multiagent Architecture for Gathering Biological Information. PAAMS (2009)
Anália Lourenço, Rafael Carreira, Sónia Carneiro, Paulo Maia, Daniel Glez-Peña, Florentino Fdez-Riverola, Eugénio C. Ferreira, Isabel Rocha, Miguel Rocha
@Note: A workbench for Biomedical Text Mining. J. Biomed. Informatics 42 (4) (2009)
Daniel Glez-Peña, Gonzalo Gómez-López, David G. Pisano, Florentino Fdez-Riverola
WhichGenes: a web-based tool for gathering, building, storing and exporting gene sets with application in gene set enrichment analysis. Nucleic Acids Res. 37 (Web-Server-Issue) (2009)
Anália Lourenço, Sónia Carneiro, Eugénio C. Ferreira, Rafael Carreira, Luis Mateus Rocha, Daniel Glez-Peña, José Ramon Méndez, Florentino Fdez-Riverola, Fernando Díaz, Isabel Rocha, Miguel Rocha
Biomedical Text Mining Applied to Document Retrieval and Semantic Indexing. IWANN (2) (2009)
Daniel Glez-Peña, Fernando Díaz, José Ramon Méndez, Juan M. Corchado, Florentino Fdez-Riverola
An Evolutionary Approach for Sample-Based Clustering on Microarray Data. IWANN (2) (2009)
José Ramon Méndez, Daniel Glez-Peña, Florentino Fdez-Riverola, Fernando Díaz, Juan M. Corchado
Managing irrelevant knowledge in CBR models for unsolicited e-mail classification. Expert Syst. Appl. 36 (2) (2009)
Daniel Glez-Peña, Rubén Domínguez, Gonzalo Gómez-López, David G. Pisano, Florentino Fdez-Riverola
Current Efforts to Integrate Biological Pathway Information. IWANN (2) (2009)
Pablo Vicente Carrera, Daniel Glez-Peña, Eva Lorenzo Iglesias, Lourdes Borrajo, Reyes Pavón, Rosalía Laza, Carmen M. Redondo Marey
Applying Text Mining to Search for Protein Patterns. IWANN (2) (2009)
Daniel Glez-Peña, Sira López, Reyes Pavón, Rosalía Laza, Eva Lorenzo Iglesias, Lourdes Borrajo
Classification of MedLine Documents Using MeSH Terms. IWANN (2) (2009)
Reyes Pavón, Daniel Glez-Peña, Rosalía Laza, Fernando Díaz, M. Victoria Luzón
A Multi-Agent System Approach for Algorithm Parameter Tuning. PAAMS (2009)
Julia Glez-Dopazo, Daniel Glez-Peña, Florentino Fdez-Riverola
Integrating Heterogeneous Data and Applications with Distributed-AIBENCH. HIS (2008)
Anália Lourenço, Rafael Carreira, Sónia Carneiro, Paulo Maia, Daniel Glez-Peña, Florentino Fdez-Riverola, Eugénio C. Ferreira, Isabel Rocha, Miguel Rocha
A framework for the development of Biomedical Text Mining software tools. BIBE (2008)
I. Cid, L. R. Janeiro, José Ramon Méndez, Daniel Glez-Peña, Florentino Fdez-Riverola
The Impact of Noise in Spam Filtering: A Case Study. ICDM (2008)
Daniel Glez-Peña, Pablo Vicente Carrera, Gonzalo Gómez-López, Carmen M. Redondo Marey
Beds and Bits: The Challenge of Translational Bioinformatics. IWPACBB (2008)
José Ramon Méndez, I. Cid, Daniel Glez-Peña, Miguel Rocha, Florentino Fdez-Riverola
A Comparative Impact Study of Attribute Selection Techniques on Naïve Bayes Spam Filters. ICDM (2008)
Daniel Glez-Peña, Manuel Glez Bedia, Fernando Díaz, Florentino Fernández Riverola
Multiple-Microarray Analysis and Internet Gathering Information with Application for Aiding Medical Diagnosis in Cancer Research. IWPACBB (2008)
José Ramon Méndez, Carlos González, Daniel Glez-Peña, Florentino Fdez-Riverola, Fernando Díaz, Juan M. Corchado
Assessing Classification Accuracy in the Revision Stage of a CBR Spam Filtering System. ICCBR (2007)
Silvia Alén, Daniel Glez-Peña, Florentino Fdez-Riverola
Developing New Services for the Automotive Industry using Matrix. WEBIST (1) (2007)
Miguel Rocha, Rui Mendes, Paulo Maia, Daniel Glez-Peña, Florentino Fdez-Riverola
A platform for the selection of genes in DNA microarraydata using evolutionary algorithms. GECCO (2007)
José Ramon Méndez, Florentino Fdez-Riverola, Daniel Glez-Peña, Fernando Díaz, Juan M. Corchado
Relaxing Feature Selection in Spam Filtering by Using Case-Based Reasoning Systems. EPIA Workshops (2007)
José Ramon Méndez, B. Corzo, Daniel Glez-Peña, Florentino Fernández Riverola, Fernando Díaz
Analyzing the Performance of Spam Filtering Methods When Dimensionality of Input Vector Changes. MLDM (2007)
Fernando Díaz, Florentino Fdez-Riverola, Daniel Glez-Peña, Juan M. Corchado
Applying GCS Networks to Fuzzy Discretized Microarray Data for Tumour Diagnosis. IDEAL (2006)
Fernando Díaz, Florentino Fdez-Riverola, Daniel Glez-Peña, Juan M. Corchado
Using Fuzzy Patterns for Gene Selection and Data Reduction on Microarray Data. IDEAL (2006)