Wolfgang Gerlach

Publication Activity (10 Years)

Years Active: 2006-2019
Publications (10 Years): 9

Top Venues

IEEE BigData

SIGSIM-PADS

BMC Bioinform.

Briefings Bioinform.

Bielefeld University (PHD)

Education History

Bielefeld University

PHD

Publications

Tobias Paczian, William L. Trimble, Wolfgang Gerlach, Travis Harrison, Andreas Wilke, Folker Meyer
The MG-RAST API explorer: an on-ramp for RESTful query composition. BMC Bioinform. 20 (1) (2019)
Folker Meyer, Saurabh Bagchi, Somali Chaterji, Wolfgang Gerlach, Ananth Grama, Travis Harrison, Tobias Paczian, William L. Trimble, Andreas Wilke
MG-RAST version 4 - lessons learned from a decade of low-budget ultra-high-throughput metagenome analysis. Briefings Bioinform. 20 (4) (2019)
Folker Meyer, Robert D. Finn, Wolfgang Gerlach, Alex L. Mitchell, Travis Harrison, Andreas Wilke
On the way to research objects for environmental genomics (or metagenomics). RO (2018)
Ashraf Mahgoub, Paul Wood, Sachandhan Ganesh, Subrata Mitra, Wolfgang Gerlach, Travis Harrison, Folker Meyer, Ananth Grama, Saurabh Bagchi, Somali Chaterji
Rafiki: a middleware for parameter tuning of NoSQL datastores for dynamic metagenomics workloads. Middleware (2017)
Caitlin Ross, Misbah Mubarak, John Jenkins, Philip H. Carns, Christopher D. Carothers, Robert B. Ross, Wei Tang, Wolfgang Gerlach, Folker Meyer
A Case Study in Using Discrete-Event Simulation to Improve the Scalability of MG-RAST. SIGSIM-PADS (2016)
Andreas Wilke, Jared Bischof, Wolfgang Gerlach, Elizabeth M. Glass, Travis Harrison, Kevin P. Keegan, Tobias Paczian, William L. Trimble, Saurabh Bagchi, Ananth Grama, Somali Chaterji, Folker Meyer
The MG-RAST metagenomics database and portal in 2015. Nucleic Acids Res. 44 (Database-Issue) (2016)
Andreas Wilke, Wolfgang Gerlach, Travis Harrison, Tobias Paczian, Wei Tang, William L. Trimble, Jared Wilkening, Narayan Desai, Folker Meyer
Shock: Active Storage for Multicloud Streaming Data Analysis. BDC (2015)
Andreas Wilke, Jared Bischof, Travis Harrison, Tom Brettin, Mark D'Souza, Wolfgang Gerlach, Hunter Matthews, Tobias Paczian, Jared Wilkening, Elizabeth M. Glass, Narayan Desai, Folker Meyer
A RESTful API for Accessing Microbial Community Data for MG-RAST. PLoS Comput. Biol. 11 (1) (2015)
Wolfgang Gerlach, Wei Tang, Andreas Wilke, Dan Olson, Folker Meyer
Container Orchestration for Scientific Workflows. IC2E (2015)
Wolfgang Gerlach, Wei Tang, Kevin P. Keegan, Travis Harrison, Andreas Wilke, Jared Bischof, Mark D'Souza, Scott Devoid, Daniel E. Murphy-Olson, Narayan Desai, Folker Meyer
Skyport: container-based execution environment management for multi-cloud scientific workflows. DataCloud@SC (2014)
Wei Tang, Jared Bischof, Narayan Desai, Kanak Mahadik, Wolfgang Gerlach, Travis Harrison, Andreas Wilke, Folker Meyer
Workload characterization for MG-RAST metagenomic data analytics service in the cloud. IEEE BigData (2014)
Wei Tang, Jared Wilkening, Narayan Desai, Wolfgang Gerlach, Andreas Wilke, Folker Meyer
A scalable data analysis platform for metagenomics. IEEE BigData (2013)
Niko Välimäki, Veli Mäkinen, Wolfgang Gerlach, Kashyap Dixit
Engineering a compressed suffix tree implementation. ACM J. Exp. Algorithmics 14 (2009)
Wolfgang Gerlach, Sebastian Jünemann, Felix Tille, Alexander Goesmann, Jens Stoye
WebCARMA: a web application for the functional and taxonomic classification of unassembled metagenomic reads. BMC Bioinform. 10 (2009)
Niko Välimäki, Wolfgang Gerlach, Kashyap Dixit, Veli Mäkinen
Engineering a Compressed Suffix Tree Implementation. WEA (2007)
Niko Välimäki, Wolfgang Gerlach, Kashyap Dixit, Veli Mäkinen
Compressed suffix tree - a basis for genome-scale sequence analysis. Bioinform. 23 (5) (2007)
Wolfgang Gerlach, Robert Giegerich
GUUGle: a utility for fast exact matching under RNA complementary rules including G-U base pairing. Bioinform. 22 (6) (2006)

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Publication Activity (10 Years)

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Wolfgang Gerlach