Compressed suffix tree - a basis for genome-scale sequence analysis.

Niko Välimäki Wolfgang Gerlach Kashyap Dixit Veli Mäkinen

Published in: Bioinform. (2007)

Keyphrases

sequence analysis
suffix array
suffix tree
data structure
space efficient
string matching
pattern matching
data compression
space requirements
similarity measurement
computational biology
sequence data
index structure
data sets
multi dimensional
nearest neighbor
machine learning