Victor M. Castro

Publication Activity (10 Years)

Years Active: 2012-2024
Publications (10 Years): 19

Top Topics

Transfer Learning

Natural Language

Top Venues

J. Am. Medical Informatics Assoc.

J. Biomed. Informatics

Publications

Isabelle-Emmanuella Nogues, Jun Wen, Yihan Zhao, Clara-Lea Bonzel, Victor M. Castro, Yucong Lin, Shike Xu, Jue Hou, Tianxi Cai
Semi-supervised Double Deep Learning Temporal Risk Prediction (SeDDLeR) with Electronic Health Records. J. Biomed. Informatics 157 (2024)
Jun Wen, Jue Hou, Clara-Lea Bonzel, Yihan Zhao, Victor M. Castro, Vivian S. Gainer, Dana Weisenfeld, Tianrun Cai, Yuk-Lam Ho, Vidul Ayakulangara Panickan, Lauren Costa, Chuan Hong, J. Michael Gaziano, Katherine P. Liao, Junwei Lu, Kelly Cho, Tianxi Cai
LATTE: Label-efficient incident phenotyping from longitudinal electronic health records. Patterns 5 (1) (2024)
Jun Wen, Jue Hou, Clara-Lea Bonzel, Yihan Zhao, Victor M. Castro, Vivian S. Gainer, Dana Weisenfeld, Tianrun Cai, Yuk-Lam Ho, Vidul Ayakulangara Panickan, Lauren Costa, Chuan Hong, J. Michael Gaziano, Katherine P. Liao, Junwei Lu, Kelly Cho, Tianxi Cai
LATTE: Label-efficient Incident Phenotyping from Longitudinal Electronic Health Records. CoRR (2023)
Doudou Zhou, Ziming Gan, Xu Shi, Alina Patwari, Everett Neil Rush, Clara-Lea Bonzel, Vidul Ayakulangara Panickan, Chuan Hong, Yuk-Lam Ho, Tianrun Cai, Lauren Costa, Xiaoou Li, Victor M. Castro, Shawn N. Murphy, Gabriel A. Brat, Griffin M. Weber, Paul Avillach, J. Michael Gaziano, Kelly Cho, Katherine P. Liao, Junwei Lu, Tianxi Cai
Multiview Incomplete Knowledge Graph Integration with application to cross-institutional EHR data harmonization. J. Biomed. Informatics 133 (2022)
Victor M. Castro, Vivian S. Gainer, Nich Wattanasin, Barbara Benoit, Andrew Cagan, Bhaswati Ghosh, Sergey Goryachev, Reeta Metta, Heekyong Park, Taowei David Wang, Michael Mendis, Martin Rees, Christopher Herrick, Shawn N. Murphy
The Mass General Brigham Biobank Portal: an i2b2-based data repository linking disparate and high-dimensional patient data to support multimodal analytics. J. Am. Medical Informatics Assoc. 29 (4) (2022)
Chuan Hong, Everett Neil Rush, Molei Liu, Doudou Zhou, Jiehuan Sun, Aaron Sonabend W., Victor M. Castro, Petra Schubert, Vidul Ayakulangara Panickan, Tianrun Cai, Lauren Costa, Zeling He, Nicholas B. Link, Ronald G. Hauser, J. Michael Gaziano, Shawn N. Murphy, George Ostrouchov, Yuk-Lam Ho, Edmon Begoli, Junwei Lu, Kelly Cho, Katherine P. Liao, Tianxi Cai
Clinical knowledge extraction via sparse embedding regression (KESER) with multi-center large scale electronic health record data. npj Digit. Medicine 4 (2021)
Jeffrey G. Klann, Hossein Estiri, Griffin M. Weber, Bertrand Moal, Paul Avillach, Chuan Hong, Amelia L. M. Tan, Brett K. Beaulieu-Jones, Victor M. Castro, Thomas Maulhardt, Alon Geva, Alberto Malovini, Andrew M. South, Shyam Visweswaran, Michele Morris, Malarkodi J. Samayamuthu, Gilbert S. Omenn, Kee Yuan Ngiam, Kenneth D. Mandl, Martin Boeker, Karen L. Olson, Danielle L. Mowery, Robert W. Follett, David A. Hanauer, Riccardo Bellazzi, Jason H. Moore, Ne-Hooi Will Loh, Douglas S. Bell, Kavishwar B. Wagholikar, Luca Chiovato, Valentina Tibollo, Siegbert Rieg, Anthony L. L. J. Li, Vianney Jouhet, Emily Schriver, Zongqi Xia, Meghan Hutch, Yuan Luo, Isaac S. Kohane, Gabriel A. Brat, Shawn N. Murphy
Validation of an internationally derived patient severity phenotype to support COVID-19 analytics from electronic health record data. J. Am. Medical Informatics Assoc. 28 (7) (2021)
Nich Wattanasin, Victor M. Castro, Vivian S. Gainer, Barbara Benoit, Andrew Cagan, Reeta Metta, Shawn N. Murphy
A Novel Data Portal to Enable COVID-19 Data Integration and Analysis. AMIA (2021)
Jennifer A. Pacheco, Luke V. Rasmussen, Ken Wiley, Thomas N. Person, David J. Cronkite, Sunghwan Sohn, Shawn N. Murphy, Justin H. Gundelach, Vivian S. Gainer, Victor M. Castro, Cong Liu, Todd Lingren, Frank D. Mentch, Agnes S. Sundaresan, Garrett Eickelberg, Valerie Willis, Al'ona Furmanchuk, Roshan Patel, David S. Carrell, Marc S. Williams, Elizabeth W. Karlson, Jodell E. Linder, Yuan Luo, Chunhua Weng, Wei-Qi Wei
Evaluation of the Portability of Natural Language Processing-based Computable Phenotypes in the eMERGE Network. AMIA (2021)
Heekyong Park, Taowei David Wang, Vivian S. Gainer, Victor M. Castro, Nich Wattanasin, Shawn N. Murphy
HistoriView: An Interactive and Scalable Visual Exploratory Plugin for Longitudinal Patient Data Review. AMIA (2020)
Hossein Estiri, Zachary H. Strasser, Jeffery G. Klann, Thomas H. McCoy Jr., Kavishwar B. Wagholikar, Sebastien Vasey, Victor M. Castro, Marykate Murphy, Shawn N. Murphy
Transitive Sequencing Medical Records for Mining Predictive and Interpretable Temporal Representations. Patterns 1 (4) (2020)
Shawn N. Murphy, Hossein Estiri, Zachary H. Strasser, Kavishwar B. Wagholikar, Victor M. Castro
High-throughput Phenotyping with EHR Sequences. AMIA (2020)
Hossein Estiri, Sebastien Vasey, Jeffrey G. Klann, Victor M. Castro, Shawn N. Murphy
Generative Transfer Learning for Measuring Plausibility of EHR Diagnosis Records Over Time. AMIA (2020)
Yuri Ahuja, Doudou Zhou, Zeling He, Jiehuan Sun, Victor M. Castro, Vivian S. Gainer, Shawn N. Murphy, Chuan Hong, Tianxi Cai
sureLDA: A multidisease automated phenotyping method for the electronic health record. J. Am. Medical Informatics Assoc. 27 (8) (2020)
Yuri Ahuja, Doudou Zhou, Zeling He, Jiehuan Sun, Victor M. Castro, Vivian S. Gainer, Shawn N. Murphy, Chuan Hong, Tianxi Cai
sureLDA: A Novel Multi-Disease Automated Phenotyping Method for the Electronic Health Record. AMIA (2019)
Katherine P. Liao, Jiehuan Sun, Tianrun A. Cai, Nicholas B. Link, Chuan Hong, Jie Huang, Jennifer E. Huffman, Jessica L. Gronsbell, Yichi Zhang, Yuk-Lam Ho, Victor M. Castro, Vivian S. Gainer, Shawn N. Murphy, Christopher J. O'Donnell, J. Michael Gaziano, Kelly Cho, Peter Szolovits, Isaac S. Kohane, Sheng Yu
High-throughput multimodal automated phenotyping (MAP) with application to PheWAS. J. Am. Medical Informatics Assoc. 26 (11) (2019)
Katherine P. Liao, Jiehuan Sun, Tianrun A. Cai, Nicholas B. Link, Chuan Hong, Jie Huang, Jennifer E. Huffman, Jessica L. Gronsbell, Lauren Costa, Victor M. Castro, Vivian S. Gainer, Shawn N. Murphy, J. Michael Gaziano, Kelly Cho, Peter Szolovits, Isaac S. Kohane, Sheng Yu, Tianxi Cai
High-Throughput Multimodal Automated Phenotyping (MAP) Incorporating Natural Language Processing with Application to PheWAS. AMIA (2018)
Victor M. Castro, Nich Wattanasin, Vivian S. Gainer, Bhaswati Ghosh, Shawn N. Murphy
Applying Computed Phenotypes Derived from Electronic Health Records in the Partners HealthCare Biobank Using i2b2. CRI (2017)
Heekyong Park, Taowei David Wang, Vivian S. Gainer, Victor M. Castro, Shawn N. Murphy
Building Better Timeline Interactions for Patient Chart Reviews. AMIA (2017)
Thomas H. McCoy Jr., Victor M. Castro, Roy H. Perlis
Stratification of Risk for Fall Resulting in Hospital Readmission through Medication Side Effects Profiles. AMIA (2015)
Shawn N. Murphy, Vivian S. Gainer, Victor M. Castro, Alyssa P. Goodson, Lori C. Phillips, Sheng Yu, Tianxi Cai
Computable Phenotypes enabled by the i2b2 Validation Platform. AMIA (2015)
Victor M. Castro, W. Kay Apperson, Vivian S. Gainer, Ashwin N. Ananthakrishnan, Alyssa P. Goodson, Taowei David Wang, Christopher D. Herrick, Shawn N. Murphy
Evaluation of matched control algorithms in EHR-based phenotyping studies: A case study of inflammatory bowel disease comorbidities. J. Biomed. Informatics 52 (2014)
Victor M. Castro, Sergey Goryachev, Christopher Herrick, Vivian S. Gainer, Martin Rees, Shawn N. Murphy
Integrating Information from Unstructured Text with Structured Clinical Data from an Electronic Medical Record to Improve Patient Cohort Identification. AMIA (2014)
Shawn N. Murphy, Christopher Herrick, Victor M. Castro, Randy L. Gollub, Nathaniel Reynolds, Patricia Ellen Grant
Amassing Pediatric Brain MRI's to Understand "Normal" using Mi2b2. AMIA (2013)
Victor M. Castro, Vivian S. Gainer, Christopher Herrick, Shawn N. Murphy, Wannapa Kay Mahamaneerat
Implementing a pharmacovigilance framework using data from electronic medical records. AMIA (2012)