Serdar Bozdag

Publication Activity (10 Years)

Years Active: 2007-2024
Publications (10 Years): 14

Top Topics

Heterogeneous Networks

Biological Data

High Throughput

Top Venues

Publications

Mohammad Al Olaimat, Serdar Bozdag, Alzheimer's Disease Neuroimaging Initiative
TA-RNN: an Attention-based Time-aware Recurrent Neural Network Architecture for Electronic Health Records. CoRR (2024)
Cagri Ozdemir, Mohammad Al Olaimat, Yashu Vashishath, Serdar Bozdag, Alzheimer's Disease Neuroimaging Initiative
IGCN: Integrative Graph Convolutional Networks for Multi-modal Data. CoRR (2024)
Ziynet Nesibe Kesimoglu, Serdar Bozdag
GRAF: Graph Attention-aware Fusion Networks. CoRR (2023)
Mohammad Al Olaimat, Jared Martinez, Fahad Saeed, Serdar Bozdag
PPAD: a deep learning architecture to predict progression of Alzheimer's disease. Bioinform. 39 (Supplement-1) (2023)
Cagatay Dursun, Anne E. Kwitek, Serdar Bozdag
PhenoGeneRanker: Gene and Phenotype Prioritization Using Multiplex Heterogeneous Networks. IEEE ACM Trans. Comput. Biol. Bioinform. 19 (5) (2022)
Tianren Yang, Mai A. Al-Duailij, Serdar Bozdag, Fahad Saeed
Classification of Autism Spectrum Disorder Using rs-fMRI data and Graph Convolutional Networks. Big Data (2022)
Yashu Vashishath, Serdar Bozdag
GWAS analysis to compute genetic markers of progression to Alzheimer's disease. BCB (2021)
Ziynet Nesibe Kesimoglu, Serdar Bozdag
SUPREME: a cancer subtype prediction methodology integrating multiple biological datatypes using graph convolutional neural networks. BCB (2021)
Cagatay Dursun, Jennifer R. Smith, G. Thomas Hayman, Anne E. Kwitek, Serdar Bozdag
NECo: A node embedding algorithm for multiplex heterogeneous networks. BIBM (2020)
Banabithi Bose, Serdar Bozdag
CTDPathSim: Cell line-tumor deconvoluted pathway-based similarity in the context of precision medicine in cancer. BCB (2020)
Cagatay Dursun, Naoki Shimoyama, Mary Shimoyama, Michael Schläppi, Serdar Bozdag
PhenoGeneRanker: A Tool for Gene Prioritization Using Complete Multiplex Heterogeneous Networks. BCB (2019)
Banabithi Bose, Serdar Bozdag
miRDriver: A Tool to Infer Copy Number Derived miRNA-Gene Networks in Cancer. BCB (2019)
Karl Stamm, Aoy Tomita-Mitchell, Serdar Bozdag
GSEPD: a Bioconductor package for RNA-seq gene set enrichment and projection display. BMC Bioinform. 20 (1) (2019)
Duc Do, Serdar Bozdag
Cancerin: A computational pipeline to infer cancer-associated ceRNA interaction networks. PLoS Comput. Biol. 14 (7) (2018)
Brittany Baur, Serdar Bozdag
A Canonical Correlation Analysis-Based Dynamic Bayesian Network Prior to Infer Gene Regulatory Networks from Multiple Types of Biological Data. J. Comput. Biol. 22 (4) (2015)
Stefano Lonardi, Denisa Duma, Matthew Alpert, Francesca Cordero, Marco Beccuti, Prasanna R. Bhat, Yonghui Wu, Gianfranco Ciardo, Burair Alsaihati, Yaqin Ma, Steve Wanamaker, Josh Resnik, Serdar Bozdag, Ming-Cheng Luo, Timothy J. Close
Combinatorial Pooling Enables Selective Sequencing of the Barley Gene Space. PLoS Comput. Biol. 9 (4) (2013)
Serdar Bozdag, Timothy J. Close, Stefano Lonardi
A Graph-Theoretical Approach to the Selection of the Minimum Tiling Path from a Physical Map. IEEE ACM Trans. Comput. Biol. Bioinform. 10 (2) (2013)
Serdar Bozdag, Aiguo Li, Gregory Riddick, Yuri Kotliarov, Mehmet Baysan, Fabio M. Iwamoto, Margaret C. Cam, Svetlana Kotliarova, Howard A. Fine
Age-Specific Signatures of Glioblastoma at the Genomic, Genetic, and Epigenetic levels. BCB (2013)
Aiguo Li, Serdar Bozdag, Yuri Kotliarov, Howard A. Fine
GliomaPredict: a clinically useful tool for assigning glioma patients to specific molecular subtypes. BMC Medical Informatics Decis. Mak. 10 (2010)
Serdar Bozdag, Aiguo Li, Stefan Wuchty, Howard A. Fine
FastMEDUSA: a parallelized tool to infer gene regulatory networks. Bioinform. 26 (14) (2010)
Serdar Bozdag, Timothy J. Close, Stefano Lonardi
A compartmentalized approach to the assembly of physical maps. BMC Bioinform. 10 (2009)
Serdar Bozdag, Timothy J. Close, Stefano Lonardi
Computing the Minimal Tiling Path from a Physical Map by Integer Linear Programming. WABI (2008)
Serdar Bozdag, Timothy J. Close, Stefano Lonardi
A Compartmentalized Approach to the Assembly of Physical Maps. BIBE (2007)