Saumyadipta Pyne

Publication Activity (10 Years)

Years Active: 2006-2022
Publications (10 Years): 9

Top Topics

Prostate Cancer

International Workshop

Deterministic Annealing

Gene Expression

Top Venues

Comput. Biol. Medicine

Comput. Stat. Data Anal.

Publications

Daniel Ahfock, Saumyadipta Pyne, Geoffrey J. McLachlan
Statistical file-matching of non-Gaussian data: A game theoretic approach. Comput. Stat. Data Anal. 168 (2022)
Sumanta Ray, Meghana Desai, Saumyadipta Pyne
Systematic mining of patterns of polysubstance use in a nationwide population survey. Comput. Biol. Medicine 151 (Part) (2022)
Xuze Zhang, Saumyadipta Pyne, Benjamin Kedem
Multivariate Tail Probabilities: Predicting Regional Pertussis Cases in Washington State. Entropy 23 (6) (2021)
Daniel Ahfock, Saumyadipta Pyne, Geoffrey J. McLachlan
Data fusion using factor analysis and low-rank matrix completion. Stat. Comput. 31 (5) (2021)
Geoffrey C. Fox, Gregor von Laszewski, Fugang Wang, Saumyadipta Pyne
AICov: An Integrative Deep Learning Framework for COVID-19 Forecasting with Population Covariates. CoRR (2020)
Shabnam Vatanpour, Saumyadipta Pyne, Ana Paula Leite, Irina Dinu
Gene set analysis and reduction for a continuous phenotype: Identifying markers of birth weight variation based on embryonic stem cells and immunologic signatures. Comput. Biol. Medicine 113 (2019)
Elham Khodayari Moez, Saumyadipta Pyne, Irina Dinu
Association between bivariate expression of key oncogenes and metabolic phenotypes of patients with prostate cancer. Comput. Biol. Medicine 103 (2018)
Daniel Ahfock, Saumyadipta Pyne, Sharon X. Lee, Geoffrey J. McLachlan
Partial identification in the statistical matching problem. Comput. Stat. Data Anal. 104 (2016)
Madhu Govindaraju, Saumyadipta Pyne
HiPC 2016 Workshop 1: International Workshop on Foundations of Big Data Computing (BigDF). HiPC Workshops (2016)
Xiaoming Wang, Saumyadipta Pyne, Irina Dinu
Gene set enrichment analysis for multiple continuous phenotypes. BMC Bioinform. 15 (2014)
Irina Dinu, Xiaoming Wang, Linda E. Kelemen, Shabnam Vatanpour, Saumyadipta Pyne
Linear combination test for gene set analysis of a continuous phenotype. BMC Bioinform. 14 (2013)
Geoffrey C. Fox, Deepak R. Mani, Saumyadipta Pyne
Parallel deterministic annealing clustering and its application to LC-MS data analysis. IEEE BigData (2013)
Ariful Azad, Arif M. Khan, Bartek Rajwa, Saumyadipta Pyne, Alex Pothen
Classifying Immunophenotypes With Templates From Flow Cytometry. BCB (2013)
Mehmet Kocak, E. Olusegun George, Saumyadipta Pyne, Stanley Pounds
An empirical Bayes approach for analysis of diverse periodic trends in time-course gene expression data. Bioinform. 29 (2) (2013)
Hsiu J. Ho, Tsung-I Lin, Hannah H. Chang, Steven B. Haase, Sui Huang, Saumyadipta Pyne
Parametric modeling of cellular state transitions as measured with flow cytometry. BMC Bioinform. 13 (S-5) (2012)
Hsiu J. Ho, Saumyadipta Pyne, Tsung-I Lin
Maximum likelihood inference for mixtures of skew Student-t-normal distributions through practical EM-type algorithms. Stat. Comput. 22 (1) (2012)
Raluca Gordân, Saumyadipta Pyne, Martha L. Bulyk
Identification of Cell Cycle-Regulated, Putative Hyphal Genes in Candida Albicans. Pacific Symposium on Biocomputing (2012)
Ariful Azad, Saumyadipta Pyne, Alex Pothen
Matching phosphorylation response patterns of antigen-receptor-stimulated T cells via flow cytometry. BMC Bioinform. 13 (S-2) (2012)
Rudolf Fruehwirth, Deepak R. Mani, Saumyadipta Pyne
Clustering with position-specific constraints on variance: Applying redescending M-estimators to label-free LC-MS data analysis. BMC Bioinform. 12 (2011)
Saumyadipta Pyne, Steven B. Haase, Hsiu J. Ho, Tsung-I Lin
Parametric modeling of cellular state transitions as measured with flow cytometry. ICCABS (2011)
Elizabeth Rossin, Tsung-I Lin, Hsiu J. Ho, Steven J. Mentzer, Saumyadipta Pyne
A framework for analytical characterization of monoclonal antibodies based on reactivity profiles in different tissues. Bioinform. 27 (19) (2011)
Saumyadipta Pyne, Xinli Hu, Kui Wang, Elizabeth Rossin, Tsung-I Lin, Lisa Maier, Clare Baecher-Allan, Geoffrey J. McLachlan, Pablo Tamayo, David Hafler, Philip L. De Jager, Jill P. Mesirov
Automated High-Dimensional Flow Cytometric Data Analysis. RECOMB (2010)
Pierre R. Bushel, Nicholas A. Heard, Roee Gutman, Liwen Liu, Shyamal D. Peddada, Saumyadipta Pyne
Dissecting the fission yeast regulatory network reveals phase-specific control elements of its cell cycle. BMC Syst. Biol. 3 (2009)
Elizabeth Rossin, Saumyadipta Pyne, Florian Hahne, Philip L. De Jager
Identification of Differential Flow Cytometry Expression. BIBE (2007)
Saumyadipta Pyne, Bruce Futcher, Steven Skiena
Meta-analysis based on control of false discovery rate: combining yeast ChIP-chip datasets. Bioinform. 22 (20) (2006)