Raluca Gordân

Publication Activity (10 Years)

Years Active: 2006-2022
Publications (10 Years): 3

Top Topics

Computational Biology

Gene Expression

Transcription Factors

Regulatory Elements

Top Venues

Nucleic Acids Res.

PLoS Comput. Biol.

Publications

Jingkang Zhao, Vincentius Martin, Raluca Gordân
Transcription Factor-Centric Approach to Identify Non-recurring Putative Regulatory Drivers in Cancer. RECOMB (2022)
Vincentius Martin, Jingkang Zhao, Ariel Afek, Zachery Mielko, Raluca Gordân
QBiC-Pred: quantitative predictions of transcription factor binding changes due to sequence variants. Nucleic Acids Res. 47 (Webserver-Issue) (2019)
Jingkang Zhao, Dongshunyi Li, Jungkyun Seo, Andrew S. Allen, Raluca Gordân
Quantifying the Impact of Non-coding Variants on Transcription Factor-DNA Binding. RECOMB (2017)
Ariel Afek, Hila Cohen, Shiran Barber-Zucker, Raluca Gordân, David B. Lukatsky
Nonconsensus Protein Binding to Repetitive DNA Sequence Elements Significantly Affects Eukaryotic Genomes. PLoS Comput. Biol. 11 (8) (2015)
Alina Munteanu, Uwe Ohler, Raluca Gordân
COUGER - co-factors associated with uniquely-bound genomic regions. Nucleic Acids Res. 42 (Webserver-Issue) (2014)
Lin Yang, Tianyin Zhou, Iris Dror, Anthony Mathelier, Wyeth W. Wasserman, Raluca Gordân, Remo Rohs
NAR Breakthrough Article: TFBSshape: a motif database for DNA shape features of transcription factor binding sites. Nucleic Acids Res. 42 (Database-Issue) (2014)
Fantine Mordelet, John Horton, Alexander J. Hartemink, Barbara E. Engelhardt, Raluca Gordân
Stability selection for regression-based models of transcription factor-DNA binding specificity. Bioinform. 29 (13) (2013)
Alina Munteanu, Raluca Gordân
Distinguishing between Genomic Regions Bound by Paralogous Transcription Factors. RECOMB (2013)
Raluca Gordân, Saumyadipta Pyne, Martha L. Bulyk
Identification of Cell Cycle-Regulated, Putative Hyphal Genes in Candida Albicans. Pacific Symposium on Biocomputing (2012)
Raluca Gordân, Alexander J. Hartemink, Martha L. Bulyk
Distinguishing Direct versus Indirect Transcription Factor-DNA Interactions. RECOMB (2010)
Raluca Gordân, Leelavati Narlikar, Alexander J. Hartemink
A Fast, Alignment-Free, Conservation-Based Method for Transcription Factor Binding Site Discovery. RECOMB (2008)
Raluca Gordân, Alexander J. Hartemink
Using DNA Duplex Stability Information for Transcription Factor Binding Site Discovery. Pacific Symposium on Biocomputing (2008)
Leelavati Narlikar, Raluca Gordân, Alexander J. Hartemink
A Nucleosome-Guided Map of Transcription Factor Binding Sites in Yeast. PLoS Comput. Biol. 3 (11) (2007)
Leelavati Narlikar, Raluca Gordân, Alexander J. Hartemink
Motif Discovery. RECOMB (2007)
Leelavati Narlikar, Raluca Gordân, Uwe Ohler, Alexander J. Hartemink
motif discovery. ISMB (Supplement of Bioinformatics) (2006)