Martha L. Bulyk

Publication Activity (10 Years)

Years Active: 2005-2021
Publications (10 Years): 4

Top Topics

High Throughput

Computational Challenges

Transcription Factors

Top Venues

Pacific Symposium on Biocomputing

Nucleic Acids Res.

Publications

Olga Afanasiev, Joanne Berghout, Steven E. Brenner, Martha L. Bulyk, Dana C. Crawford, Jonathan H. Chen, Roxana Daneshjou, Lukasz Kidzinski
Computational Challenges and Artificial Intelligence in Precision Medicine. PSB (2021)
Steven E. Brenner, Martha L. Bulyk, Dana C. Crawford, Alexander A. Morgan, Predrag Radivojac, Nicholas P. Tatonetti
Session Introduction. PSB (2020)
Steven E. Brenner, Martha L. Bulyk, Dana C. Crawford, Jill P. Mesirov, Alexander A. Morgan, Predrag Radivojac
Session introduction. PSB (2019)
Joanne Berghout, Yves A. Lussier, Francesca Vitali, Martha L. Bulyk, Maricel G. Kann, Jason H. Moore
Reading between the genes: interpreting non-coding DNA in high-throughput. PSB (2019)
Maxwell A. Hume, Luis A. Barrera, Stephen S. Gisselbrecht, Martha L. Bulyk
UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res. 43 (Database-Issue) (2015)
Bo Jiang, Jun S. Liu, Martha L. Bulyk
-mers. Bioinform. 29 (11) (2013)
Raluca Gordân, Saumyadipta Pyne, Martha L. Bulyk
Identification of Cell Cycle-Regulated, Putative Hyphal Genes in Candida Albicans. Pacific Symposium on Biocomputing (2012)
Anton Aboukhalil, Martha L. Bulyk
LOESS correction for length variation in gene set-based genomic sequence analysis. Bioinform. 28 (11) (2012)
Xin Guo, Martha L. Bulyk, Alexander J. Hartemink
Intrinsic Disorder Within and Flanking the DNA-Binding Domains of Human Transcription Factors. Pacific Symposium on Biocomputing (2012)
Kimberly Robasky, Martha L. Bulyk
UniPROBE, update 2011: expanded content and search tools in the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res. 39 (Database-Issue) (2011)
Raluca Gordân, Alexander J. Hartemink, Martha L. Bulyk
Distinguishing Direct versus Indirect Transcription Factor-DNA Interactions. RECOMB (2010)
Trevis M. Alleyne, Lourdes Peña Castillo, Gwenael Badis, Shaheynoor Talukder, Michael F. Berger, Andrew R. Gehrke, Anthony A. Philippakis, Martha L. Bulyk, Quaid Morris, Timothy R. Hughes
-mers. Bioinform. 25 (8) (2009)
Daniel E. Newburger, Martha L. Bulyk
UniPROBE: an online database of protein binding microarray data on protein-DNA interactions. Nucleic Acids Res. 37 (Database-Issue) (2009)
Rachel Patton McCord, Martha L. Bulyk
Functional Trends in Structural Classes of the DNA Binding Domains of Regulatory Transcription Factors. Pacific Symposium on Biocomputing (2008)
Martha L. Bulyk, Ernest Fraenkel, Alexander J. Hartemink, Yael Mandel-Gutfreund
Session Introduction. Pacific Symposium on Biocomputing (2008)
Anthony A. Philippakis, Aaron M. Qureshi, Michael F. Berger, Martha L. Bulyk
Design of Compact, Universal DNA Microarrays for Protein Binding Microarray Experiments. J. Comput. Biol. 15 (7) (2008)
Anthony A. Philippakis, Aaron M. Qureshi, Michael F. Berger, Martha L. Bulyk
Design of Compact, Universal DNA Microarrays for Protein Binding Microarray Experiments. RECOMB (2007)
Martha L. Bulyk, Alexander J. Hartemink, Ernest Fraenkel, Gary D. Stormo
Session Introduction. Pacific Symposium on Biocomputing (2007)
Anthony A. Philippakis, Brian W. Busser, Stephen S. Gisselbrecht, Fangxue Sherry He, Beatriz Estrada, Alan M. Michelson, Martha L. Bulyk
Muscle Founder Cells. PLoS Comput. Biol. 2 (5) (2006)
Bertrand R. Huber, Martha L. Bulyk
Meta-analysis discovery of tissue-specific DNA sequence motifs from mammalian gene expression data. BMC Bioinform. 7 (2006)
Anthony A. Philippakis, Fangxue Sherry He, Martha L. Bulyk
ModuleFinder: A Tool for Computational Discovery of Cis Regulatory Modules. Pacific Symposium on Biocomputing (2005)