Mohamed Ibrahim

Publication Activity (10 Years)

Years Active: 2015-2022
Publications (10 Years): 35

Top Topics

Quantitative Analysis

Security Problems

Digital Content

Top Venues

IEEE Trans. Comput. Aided Des. Integr. Circuits Syst.

Publications

Mohamed Ibrahim, Zhanwei Zhong, Bhargab B. Bhattacharya, Krishnendu Chakrabarty
Efficient Regulation of Synthetic Biocircuits Using Droplet-Aliquot Operations on MEDA Biochips. IEEE Trans. Comput. Aided Des. Integr. Circuits Syst. 41 (8) (2022)
Mohamed Ibrahim, Tung-Che Liang, Kristin Scott, Krishnendu Chakrabarty, Ramesh Karri
Molecular Barcoding as a Defense Against Benchtop Biochemical Attacks on DNA Fingerprinting and Information Forensics. IEEE Trans. Inf. Forensics Secur. 15 (2020)
Sukanta Bhattacharjee, Jack Tang, Sudip Poddar, Mohamed Ibrahim, Ramesh Karri, Krishnendu Chakrabarty
Bio-chemical Assay Locking to Thwart Bio-IP Theft. ACM Trans. Design Autom. Electr. Syst. 25 (1) (2020)
Jack Tang, Mohamed Ibrahim, Krishnendu Chakrabarty, Ramesh Karri
Analysis and Design of Tamper-Mitigating Microfluidic Routing Fabrics. IEEE Trans. Comput. Aided Des. Integr. Circuits Syst. 39 (5) (2020)
Mohamed Ibrahim, Krishnendu Chakrabarty, Jun Zeng
BioCyBig: A Cyberphysical System for Integrative Microfluidics-Driven Analysis of Genomic Association Studies. IEEE Trans. Big Data 6 (4) (2020)
Yasamin Moradi, Mohamed Ibrahim, Krishnendu Chakrabarty, Ulf Schlichtmann
An Efficient Fault-Tolerant Valve-Based Microfluidic Routing Fabric for Droplet Barcoding in Single-Cell Analysis. IEEE Trans. Comput. Aided Des. Integr. Circuits Syst. 39 (2) (2020)
Jack Tang, Mohamed Ibrahim, Krishnendu Chakrabarty, Ramesh Karri
Synthesis of Tamper-Resistant Pin-Constrained Digital Microfluidic Biochips. IEEE Trans. Comput. Aided Des. Integr. Circuits Syst. 39 (1) (2020)
Jack Tang, Mohamed Ibrahim, Krishnendu Chakrabarty, Ramesh Karri
Toward Secure and Trustworthy Cyberphysical Microfluidic Biochips. IEEE Trans. Comput. Aided Des. Integr. Circuits Syst. 38 (4) (2019)
Jack Tang, Mohamed Ibrahim, Krishnendu Chakrabarty
Randomized Checkpoints: A Practical Defense for Cyber-Physical Microfluidic Systems. IEEE Des. Test 36 (1) (2019)
Aditya Sridhar, Mohamed Ibrahim, Krishnendu Chakrabarty
Synterface: Efficient Chip-to-World Interfacing for Flow-Based Microfluidic Biochips Using Pin-Count Minimization. ACM Trans. Embed. Comput. Syst. 18 (5s) (2019)
Mohamed Ibrahim, Krishnendu Chakrabarty, Ulf Schlichtmann
Synthesis of a Cyberphysical Hybrid Microfluidic Platform for Single-Cell Analysis. IEEE Trans. Comput. Aided Des. Integr. Circuits Syst. 38 (7) (2019)
Mohamed Ibrahim, Maria Gorlatova, Krishnendu Chakrabarty
The Internet of Microfluidic Things: Perspectives on System Architecture and Design Challenges: Invited Paper. ICCAD (2019)
Mohamed Ibrahim, Bhargab B. Bhattacharya, Krishnendu Chakrabarty
. DATE (2019)
Mohamed Ibrahim, Aditya Sridhar, Krishnendu Chakrabarty, Ulf Schlichtmann
Synthesis of Reconfigurable Flow-Based Biochips for Scalable Single-Cell Screening. IEEE Trans. Comput. Aided Des. Integr. Circuits Syst. 38 (12) (2019)
Jack Tang, Mohamed Ibrahim, Krishnendu Chakrabarty, Ramesh Karri
Secure Randomized Checkpointing for Digital Microfluidic Biochips. IEEE Trans. Comput. Aided Des. Integr. Circuits Syst. 37 (6) (2018)
Mohamed Ibrahim, Krishnendu Chakrabarty
Cyber-Physical Digital-Microfluidic Biochips: Bridging the Gap Between Microfluidics and Microbiology. Proc. IEEE 106 (9) (2018)
Farshad Firouzi, Bahar J. Farahani, Mohamed Ibrahim, Krishnendu Chakrabarty
Keynote Paper: From EDA to IoT eHealth: Promises, Challenges, and Solutions. IEEE Trans. Comput. Aided Des. Integr. Circuits Syst. 37 (12) (2018)
Jack Tang, Mohamed Ibrahim, Krishnendu Chakrabarty, Ramesh Karri
Tamper-resistant pin-constrained digital microfluidic biochips. DAC (2018)
Yasamin Moradi, Mohamed Ibrahim, Krishnendu Chakrabarty, Ulf Schlichtmann
Fault-tolerant valve-based microfluidic routing fabric for droplet barcoding in single-cell analysis. DATE (2018)
Sukanta Bhattacharjee, Jack Tang, Mohamed Ibrahim, Krishnendu Chakrabarty, Ramesh Karri
Locking of biochemical assays for digital microfluidic biochips. ETS (2018)
Oliver Keszöcze, Mohamed Ibrahim, Robert Wille, Krishnendu Chakrabarty, Rolf Drechsler
Exact Synthesis of Biomolecular Protocols for Multiple Sample Pathways on Digital Microfluidic Biochips. VLSI Design (2018)
Jack Tang, Mohamed Ibrahim, Krishnendu Chakrabarty, Ramesh Karri
Security Trade-Offs in Microfluidic Routing Fabrics. ICCD (2017)
Mohamed Ibrahim, Krishnendu Chakrabarty, Ulf Schlichtmann
CoSyn: Efficient single-cell analysis using a hybrid microfluidic platform. DATE (2017)
Mohamed Ibrahim, Krishnendu Chakrabarty, Kristin Scott
Synthesis of Cyberphysical Digital-Microfluidic Biochips for Real-Time Quantitative Analysis. IEEE Trans. Comput. Aided Des. Integr. Circuits Syst. 36 (5) (2017)
Jack Tang, Mohamed Ibrahim, Krishnendu Chakrabarty, Ramesh Karri
Security Implications of Cyberphysical Flow-Based Microfluidic Biochips. ATS (2017)
Mohamed Ibrahim, Aditya Sridhar, Krishnendu Chakrabarty, Ulf Schlichtmann
Sortex: Efficient timing-driven synthesis of reconfigurable flow-based biochips for scalable single-cell screening. ICCAD (2017)
Mohamed Ibrahim, Krishnendu Chakrabarty
Digital-microfluidic biochips for quantitative analysis: Bridging the Gap between microfluidics and microbiology. DATE (2017)
Sk Subidh Ali, Mohamed Ibrahim, Ozgur Sinanoglu, Krishnendu Chakrabarty, Ramesh Karri
Microfluidic encryption of on-chip biochemical assays. BioCAS (2016)
Mohamed Ibrahim, Krishnendu Chakrabarty
Cyberphysical adaptation in digital-microfluidic biochips. BioCAS (2016)
Mohamed Ibrahim, Krishnendu Chakrabarty
Digital-Microfluidic Biochips. Computer 49 (6) (2016)
Sk Subidh Ali, Mohamed Ibrahim, Ozgur Sinanoglu, Krishnendu Chakrabarty, Ramesh Karri
Security Assessment of Cyberphysical Digital Microfluidic Biochips. IEEE ACM Trans. Comput. Biol. Bioinform. 13 (3) (2016)
Jack Tang, Ramesh Karri, Mohamed Ibrahim, Krishnendu Chakrabarty
Securing digital microfluidic biochips by randomizing checkpoints. ITC (2016)
Mohamed Ibrahim, Craig Boswell, Krishnendu Chakrabarty, Kristin Scott, Miroslav Pajic
A real-time digital-microfluidic platform for epigenetics. CASES (2016)
Mohamed Ibrahim, Krishnendu Chakrabarty, Kristin Scott
Integrated and real-time quantitative analysis using cyberphysical digital-microfluidic biochips. DATE (2016)
Sk Subidh Ali, Mohamed Ibrahim, Jeyavijayan Rajendran, Ozgur Sinanoglu, Krishnendu Chakrabarty
Supply-Chain Security of Digital Microfluidic Biochips. Computer 49 (8) (2016)
Sk Subidh Ali, Mohamed Ibrahim, Ozgur Sinanoglu, Krishnendu Chakrabarty, Ramesh Karri
Security implications of cyberphysical digital microfluidic biochips. ICCD (2015)
Mohamed Ibrahim, Krishnendu Chakrabarty
Error recovery in digital microfluidics for personalized medicine. DATE (2015)
Mohamed Ibrahim, Krishnendu Chakrabarty
Efficient Error Recovery in Cyberphysical Digital-Microfluidic Biochips. IEEE Trans. Multi Scale Comput. Syst. 1 (1) (2015)
Mohamed Ibrahim, Zipeng Li, Krishnendu Chakrabarty
Advances in Design Automation Techniques for Digital-Microfluidic Biochips. SyDe Summer School (2015)
Kai Hu, Mohamed Ibrahim, Liji Chen, Zipeng Li, Krishnendu Chakrabarty, Richard B. Fair
Experimental demonstration of error recovery in an integrated cyberphysical digital-microfluidic platform. BioCAS (2015)