Michael L. Hines

Publication Activity (10 Years)

Years Active: 1997-2022
Publications (10 Years): 17

Top Topics

Computational Neuroscience

Modeling Language

Reaction Diffusion

Top Venues

Frontiers Neuroinformatics

Frontiers Comput. Neurosci.

Publications

Omar Awile, Pramod S. Kumbhar, Nicolas Cornu, Salvador Dura-Bernal, James Gonzalo King, Olli Lupton, Ioannis Magkanaris, Robert A. McDougal, Adam J. H. Newton, Fernando Pereira, Alexandru Savulescu, Nicholas T. Carnevale, William W. Lytton, Michael L. Hines, Felix Schürmann
Modernizing the NEURON Simulator for Sustainability, Portability, and Performance. Frontiers Neuroinformatics 16 (2022)
Pramod S. Kumbhar, Omar Awile, Liam Keegan, Jorge Blanco Alonso, James G. King, Michael L. Hines, Felix Schürmann
An Optimizing Multi-platform Source-to-source Compiler Framework for the NEURON MODeling Language. ICCS (1) (2020)
Bruno R. C. Magalhães, Michael L. Hines, Thomas Sterling, Felix Schürmann
Fully-Asynchronous Fully-Implicit Variable-Order Variable-Timestep Simulation of Neural Networks. ICCS (5) (2020)
Bruno R. C. Magalhães, Thomas Sterling, Michael L. Hines, Felix Schürmann
Asynchronous Branch-Parallel Simulation of Detailed Neuron Models. Frontiers Neuroinformatics 13 (2019)
Pramod S. Kumbhar, Omar Awile, Liam Keegan, Jorge Blanco Alonso, James G. King, Michael L. Hines, Felix Schürmann
An optimizing multi-platform source-to-source compiler framework for the NEURON MODeling Language. CoRR (2019)
Bruno R. C. Magalhães, Michael L. Hines, Thomas Sterling, Felix Schürmann
Fully-Asynchronous Fully-Implicit Variable-Order Variable-Timestep Simulation of Neural Networks. CoRR (2019)
Pramod S. Kumbhar, Michael L. Hines, Jeremy Fouriaux, Aleksandr Ovcharenko, James G. King, Fabien Delalondre, Felix Schürmann
CoreNEURON : An Optimized Compute Engine for the NEURON Simulator. Frontiers Neuroinformatics 13 (2019)
Bruno R. C. Magalhães, Thomas Sterling, Michael L. Hines, Felix Schürmann
Fully-Asynchronous Cache-Efficient Simulation of Detailed Neural Networks. ICCS (3) (2019)
Bruno R. C. Magalhães, Thomas Sterling, Felix Schürmann, Michael L. Hines
Exploiting Flow Graph of System of ODEs to Accelerate the Simulation of Biologically-Detailed Neural Networks. IPDPS (2019)
Inga Blundell, Romain Brette, Thomas A. Cleland, Thomas G. Close, Daniel Coca, Andrew P. Davison, Sandra Diaz-Pier, Carlos Fernandez Musoles, Padraig Gleeson, Dan F. M. Goodman, Michael L. Hines, Michael W. Hopkins, Pramod S. Kumbhar, David R. Lester, Bóris Marin, Abigail Morrison, Eric Müller, Thomas Nowotny, Alexander Peyser, Dimitri Plotnikov, Paul Richmond, Andrew Rowley, Bernhard Rumpe, Marcel Stimberg, Alan B. Stokes, Adam R. Tomkins, Guido Trensch, Michael Marmaduke Woodman, Jochen Martin Eppler
Code Generation in Computational Neuroscience: A Review of Tools and Techniques. Frontiers Neuroinformatics 12 (2018)
Adam J. H. Newton, Robert A. McDougal, Michael L. Hines, William W. Lytton
Using NEURON for Reaction-Diffusion Modeling of Extracellular Dynamics. Frontiers Neuroinformatics 12 (2018)
Zhongwei Lin, Carl Tropper, Robert A. McDougal, Mohammand Nazrul Ishlam Patoary, William W. Lytton, Yiping Yao, Michael L. Hines
Multithreaded Stochastic PDES for Reactions and Diffusions in Neurons. ACM Trans. Model. Comput. Simul. 27 (2) (2017)
Zhongwei Lin, Carl Tropper, Yiping Yao, Robert A. McDougal, Mohammand Nazrul Ishlam Patoary, William W. Lytton, Michael L. Hines
Load balancing for multi-threaded PDES of stochastic reaction-diffusion in neurons. J. Simulation 11 (3) (2017)
Robert A. McDougal, Thomas M. Morse, Ted Carnevale, Luis N. Marenco, Rixin Wang, Michele Migliore, Perry L. Miller, Gordon M. Shepherd, Michael L. Hines
Twenty years of ModelDB and beyond: building essential modeling tools for the future of neuroscience. J. Comput. Neurosci. 42 (1) (2017)
Francesco Cavarretta, Addolorata Marasco, Michael L. Hines, Gordon M. Shepherd, Michele Migliore
Glomerular and Mitral-Granule Cell Microcircuits Coordinate Temporal and Spatial Information Processing in the Olfactory Bulb. Frontiers Comput. Neurosci. 10 (2016)
Pramod S. Kumbhar, Michael L. Hines, Aleksandr Ovcharenko, Damián A. Mallón, James G. King, Florentino Sainz, Felix Schürmann, Fabien Delalondre
Leveraging a Cluster-Booster Architecture for Brain-Scale Simulations. ISC (2016)
William W. Lytton, Alexandra Seidenstein, Salvador Dura-Bernal, Robert A. McDougal, Felix Schürmann, Michael L. Hines
Simulation Neurotechnologies for Advancing Brain Research: Parallelizing Large Networks in NEURON. Neural Comput. 28 (10) (2016)
Zhongwei Lin, Carl Tropper, Mohammand Nazrul Ishlam Patoary, Robert A. McDougal, William W. Lytton, Michael L. Hines
NTW-MT: a Multi-threaded Simulator for Reaction Diffusion Simulations in NEURON. SIGSIM-PADS (2015)
Robert A. McDougal, Thomas M. Morse, Michael L. Hines, Gordon M. Shepherd
ModelView for ModelDB: Online Presentation of Model Structure. Neuroinformatics 13 (4) (2015)
Aleksandr Ovcharenko, Pramod S. Kumbhar, Michael L. Hines, Francesco Cremonesi, Timothée Ewart, Stuart Yates, Felix Schürmann, Fabien Delalondre
Simulating Morphologically Detailed Neuronal Networks at Extreme Scale. PARCO (2015)
Samuel A. Neymotin, Robert A. McDougal, Mohamed A. Sherif, Christopher P. Fall, Michael L. Hines, William W. Lytton
Neuronal Calcium Wave Propagation Varies with Changes in Endoplasmic Reticulum Parameters: A Computer Model. Neural Comput. 27 (4) (2015)
Michele Migliore, Francesco Cavarretta, Michael L. Hines, Gordon M. Shepherd
Distributed organization of a brain microcircuit analyzed by three-dimensional modeling: the olfactory bulb. Frontiers Comput. Neurosci. 8 (2014)
Eilif B. Müller, James A. Bednar, Markus Diesmann, Marc-Oliver Gewaltig, Michael L. Hines, Andrew P. Davison
Python in neuroscience. Frontiers Neuroinformatics 9 (2014)
Yuguo Yu, Thomas S. McTavish, Michael L. Hines, Gordon M. Shepherd, Cesare Valenti, Michele Migliore
Sparse Distributed Representation of Odors in a Large-scale Olfactory Bulb Circuit. PLoS Comput. Biol. 9 (3) (2013)
Robert A. McDougal, Michael L. Hines, William W. Lytton
Reaction-diffusion in the NEURON simulator. Frontiers Neuroinformatics 7 (2013)
Thomas S. McTavish, Michele Migliore, Gordon M. Shepherd, Michael L. Hines
Mitral cell spike synchrony modulated by dendrodendritic synapse location. Frontiers Comput. Neurosci. 6 (2012)
Michael L. Hines, Sameer Kumar, Felix Schürmann
Comparison of neuronal spike exchange methods on a Blue Gene/P supercomputer. Frontiers Comput. Neurosci. 5 (2011)
Sameer Kumar, Philip Heidelberger, Dong Chen, Michael L. Hines
Optimization of applications with non-blocking neighborhood collectives via multisends on the Blue Gene/P supercomputer. IPDPS (2010)
Padraig Gleeson, Sharon M. Crook, Robert C. Cannon, Michael L. Hines, Guy O. Billings, Matteo Farinella, Thomas M. Morse, Andrew P. Davison, Subhasis Ray, Upinder S. Bhalla, Simon R. Barnes, Yoana D. Dimitrova, Angus Silver
NeuroML: A Language for Describing Data Driven Models of Neurons and Networks with a High Degree of Biological Detail. PLoS Comput. Biol. 6 (6) (2010)
James G. King, Michael L. Hines, Sean L. Hill, Philip H. Goodman, Henry Markram, Felix Schürmann
A component-based extension framework for large-scale parallel simulations in NEURON. Frontiers Neuroinformatics 3 (2009)
Michael L. Hines, Andrew P. Davison, Eilif B. Müller
NEURON and Python. Frontiers Neuroinformatics 3 (2009)
Michael L. Hines, Hubert Eichner, Felix Schürmann
Neuron splitting in compute-bound parallel network simulations enables runtime scaling with twice as many processors. J. Comput. Neurosci. 25 (1) (2008)
Michael L. Hines, Henry Markram, Felix Schürmann
Fully implicit parallel simulation of single neurons. J. Comput. Neurosci. 25 (3) (2008)
William W. Lytton, Ahmet Omurtag, Samuel A. Neymotin, Michael L. Hines
Just-in-Time Connectivity for Large Spiking Networks. Neural Comput. 20 (11) (2008)
Robert C. Cannon, Marc-Oliver Gewaltig, Padraig Gleeson, Upinder S. Bhalla, Hugo Cornelis, Michael L. Hines, Fredrick W. Howell, Eilif Mueller, Joel R. Stiles, Stefan Wils, Erik De Schutter
Interoperability of Neuroscience Modeling Software: Current Status and Future Directions. Neuroinformatics 5 (2) (2007)
Romain Brette, Michelle Rudolph, Ted Carnevale, Michael L. Hines, David Beeman, James M. Bower, Markus Diesmann, Abigail Morrison, Philip H. Goodman, Frederick C. Harris Jr., Milind Zirpe, Thomas Natschläger, Dejan Pecevski, Bard Ermentrout, Mikael Djurfeldt, Anders Lansner, Olivier Rochel, Thierry Viéville, Eilif Mueller, Andrew P. Davison, Sami El Boustani, Alain Destexhe
Simulation of networks of spiking neurons: A review of tools and strategies. J. Comput. Neurosci. 23 (3) (2007)
Michele Migliore, C. Cannia, William W. Lytton, Henry Markram, Michael L. Hines
Parallel network simulations with NEURON. J. Comput. Neurosci. 21 (2) (2006)
William W. Lytton, Michael L. Hines
Independent Variable Time-Step Integration of Individual Neurons for Network Simulations. Neural Comput. 17 (4) (2005)
Michele Migliore, Michael L. Hines, Gordon M. Shepherd
The Role of Distal Dendritic Gap Junctions in Synchronization of Mitral Cell Axonal Output. J. Comput. Neurosci. 18 (2) (2005)
Michael L. Hines, Nicholas T. Carnevale
Discrete event simulation in the NEURON environment. Neurocomputing (2004)
Michael L. Hines, Thomas M. Morse, Michele Migliore, Nicholas T. Carnevale, Gordon M. Shepherd
ModelDB: A Database to Support Computational Neuroscience. J. Comput. Neurosci. 17 (1) (2004)
Andrew P. Davison, Thomas M. Morse, Michele Migliore, Gordon M. Shepherd, Michael L. Hines
Semi-automated population of an online database of neuronal models (ModelDB) with citation information, using PubMed for validation. Neuroinformatics 2 (3) (2004)
Chiquito J. Crasto, Thomas M. Morse, Michele Migliore, Prakash M. Nadkarni, Michael L. Hines, Douglas E. Brash, Perry L. Miller, Gordon M. Shepherd
Creating Knowledgebases to Text-Mine PUBMED Articles Using Clustering Techniques. AMIA (2003)
Daniel Gardner, Arthur W. Toga, Giorgio A. Ascoli, Jackson T. Beatty, James F. Brinkley, Anders M. Dale, Peter T. Fox, Esther P. Gardner, John S. George, Nigel H. Goddard, Kristen M. Harris, Edward Herskovits, Michael L. Hines, Gwen A. Jacobs, Russell E. Jacobs, Edward G. Jones, David N. Kennedy, Daniel Y. Kimberg, John C. Mazziotta, Perry L. Miller, Susumu Mori, David C. Mountain, Allan L. Reiss, Glenn D. Rosen, David A. Rottenberg, Gordon M. Shepherd, Neil R. Smalheiser, Kenneth P. Smith, Tom Strachan, David C. Van Essen, Robert W. Williams, Stephen T. C. Wong
Towards effective and rewarding data sharing. Neuroinformatics 1 (3) (2003)
Michele Migliore, Thomas M. Morse, Andrew P. Davison, Luis N. Marenco, Gordon M. Shepherd, Michael L. Hines
ModelDB - Making models publicly accessible to support computational neuroscience. Neuroinformatics 1 (1) (2003)
Perry L. Miller, Prakash M. Nadkarni, Michael S. Singer, Luis N. Marenco, Michael L. Hines, Gordon M. Shepherd
Synthesis of Research: Integration of Multidisciplinary Sensory Data: A Pilot Model of the Human Brain Project Approach. J. Am. Medical Informatics Assoc. 8 (1) (2001)
Nigel H. Goddard, Greg Hood, Fredrick W. Howell, Michael L. Hines, Erik De Schutter
NEOSIM: Portable large-scale plug and play modelling. Neurocomputing (2001)
Michael L. Hines, Nicholas T. Carnevale
Expanding NEURON's Repertoire of Mechanisms with NMODL. Neural Comput. 12 (5) (2000)
Emmanouil Skoufos, Jason S. Mirsky, Matthew D. Healy, Michael S. Singer, Michael L. Hines, Prakash M. Nakardi, Perry L. Miller, Gordon M. Shepherd
Acquiring, Storing and Retrieving Diverse Biomedical Data Using the World-Wide-Web: The SenseLab Paradigm. AMIA (1998)
Michael L. Hines, Nicholas T. Carnevale
The NEURON Simulation Environment. Neural Comput. 9 (6) (1997)