Henry Markram

Publication Activity (10 Years)

Years Active: 1996-2023
Publications (10 Years): 27

Top Topics

Reinforcement Learning

Physically Plausible

Model Predictive Control

Top Venues

Frontiers Neuroinformatics

PLoS Comput. Biol.

Publications

Maria Reva, Christian Rössert, Alexis Arnaudon, Tanguy Damart, Darshan Mandge, Anil Tuncel, Srikanth Ramaswamy, Henry Markram, Werner Van Geit
A universal workflow for creation, validation, and generalization of detailed neuronal models. Patterns 4 (11) (2023)
Marwan Abdellah, Juan Jose Garcia-Cantero, Nadir Román Guerrero, Alessandro Foni, Jay S. Coggan, Corrado Calì, Marco Agus, Eleftherios Zisis, Daniel Keller, Markus Hadwiger, Pierre J. Magistretti, Henry Markram, Felix Schürmann
neuroscience. Briefings Bioinform. 24 (1) (2023)
Mohameth-François Sy, Bogdan Roman, Samuel Kerrien, Didac Montero Mendez, Henry Genet, Wojciech Wajerowicz, Michaël Dupont, Ian Lavriushev, Julien Machon, Kenneth Pirman, Dhanesh Neela Mana, Natalia Stafeeva, Anna-Kristin Kaufmann, Huanxiang Lu, Jonathan Lurie, Pierre-Alexandre Fonta, Alejandra Garcia Rojas Martinez, Alexander D. Ulbrich, Carolina Lindqvist, Silvia Jimenez, David J. Rotenberg, Henry Markram, Sean L. Hill
Blue Brain Nexus: An open, secure, scalable system for knowledge graph management and data-driven science. Semantic Web 14 (4) (2023)
Yann Roussel, Csaba Verasztó, Dimitri Rodarie, Tanguy Damart, Michael W. Reimann, Srikanth Ramaswamy, Henry Markram, Daniel Keller
Mapping of morpho-electric features to molecular identity of cortical inhibitory neurons. PLoS Comput. Biol. 19 (1) (2023)
Cristina E. Gonzalez-Espinoza, Anna-Kristin Kaufmann, Eugenia Oshurko, Alejandra Garcia Rojas Martinez, Sarah Mouffok, Konstantinos Platis, Jonathan Lurie, Jayakrishnan Nair, Patrycja Lurie, Silvia Jimenez, Pierre-Alexandre Fonta, Huanxiang Lu, Nabil Alibou, Mohameth-François Sy, Bogdan Roman, Samuel Kerrien, Henry Markram, Sean L. Hill
Blue Brain Knowledge Graph: Leveraging Semantic Web Technologies for Simulation Neuroscience. ISWC (Posters/Demos/Industry) (2023)
Berat Denizdurduran, Henry Markram, Marc-Oliver Gewaltig
Optimum trajectory learning in musculoskeletal systems with model predictive control and deep reinforcement learning. Biol. Cybern. 116 (5) (2022)
Berat Denizdurduran, Henry Markram, Marc-Oliver Gewaltig
Correction: Optimum trajectory learning in musculoskeletal systems with model predictive control and deep reinforcement learning. Biol. Cybern. 116 (5) (2022)
Dimitri Rodarie, Csaba Verasztó, Yann Roussel, Michael W. Reimann, Daniel Keller, Srikanth Ramaswamy, Henry Markram, Marc-Oliver Gewaltig
A method to estimate the cellular composition of the mouse brain from heterogeneous datasets. PLoS Comput. Biol. 18 (12) (2022)
Berat Denizdurduran, Henry Markram, Marc-Oliver Gewaltig
Correction: Optimum trajectory learning in musculoskeletal systems with model predictive control and deep reinforcement learning. Biol. Cybern. 116 (5) (2022)
Marwan Abdellah, Alessandro Foni, Eleftherios Zisis, Nadir Román Guerrero, Samuel Lapere, Jay S. Coggan, Daniel Keller, Henry Markram, Felix Schürmann
Metaball skinning of synthetic astroglial morphologies into realistic mesh models for in silico simulations and visual analytics. Bioinform. 37 (Supplement) (2021)
Jan Krepl, Francesco Casalegno, Emilie Delattre, Csaba Erö, Huanxiang Lu, Daniel Keller, Dimitri Rodarie, Henry Markram, Felix Schürmann
Supervised Learning With Perceptual Similarity for Multimodal Gene Expression Registration of a Mouse Brain Atlas. Frontiers Neuroinformatics 15 (2021)
Marwan Abdellah, Nadir Román Guerrero, Samuel Lapere, Jay S. Coggan, Daniel Keller, Benoit Coste, Snigdha Dagar, Jean-Denis Courcol, Henry Markram, Felix Schürmann
Interactive visualization and analysis of morphological skeletons of brain vasculature networks with VessMorphoVis. Bioinform. 36 (Supplement-1) (2020)
Tanguy Damart, Werner Van Geit, Henry Markram
Data driven building of realistic neuron model using IBEA and CMA evolution strategies. GECCO Companion (2020)
Xue Fan, Henry Markram
A Brief History of Simulation Neuroscience. Frontiers Neuroinformatics 13 (2019)
Elisabetta Iavarone, Jane Yi, Ying Shi, Bas-Jan Zandt, Christian O'Reilly, Werner Van Geit, Christian Rössert, Henry Markram, Sean L. Hill
Experimentally-constrained biophysical models of tonic and burst firing modes in thalamocortical neurons. PLoS Comput. Biol. 15 (5) (2019)
Csaba Ero, Marc-Oliver Gewaltig, Daniel Keller, Henry Markram
Corrigendum: A Cell Atlas for the Mouse Brain. Frontiers Neuroinformatics 13 (2019)
Csaba Ero, Marc-Oliver Gewaltig, Daniel Keller, Henry Markram
A Cell Atlas for the Mouse Brain. Frontiers Neuroinformatics 12 (2018)
Lida Kanari, Pawel Dlotko, Martina Scolamiero, Ran Levi, Julian C. Shillcock, Kathryn Hess, Henry Markram
A Topological Representation of Branching Neuronal Morphologies. Neuroinformatics 16 (1) (2018)
Marwan Abdellah, Juan Hernando, Stefan Eilemann, Samuel Lapere, Nicolas Antille, Henry Markram, Felix Schürmann
NeuroMorphoVis: a collaborative framework for analysis and visualization of neuronal morphology skeletons reconstructed from microscopy stacks. Bioinform. 34 (13) (2018)
Rosanna Migliore, Carmen Alina Lupascu, Luca Leonardo Bologna, Armando Romani, Jean-Denis Courcol, Stefano Antonel, Werner Van Geit, Alex M. Thomson, Audrey Mercer, Sigrun Lange, Joanne Falck, Christian Rössert, Ying Shi, Olivier Hagens, Maurizio Pezzoli, Tamás F. Freund, Szabolcs Káli, Eilif B. Müller, Felix Schürmann, Henry Markram, Michele Migliore
The physiological variability of channel density in hippocampal CA1 pyramidal cells and interneurons explored using a unified data-driven modeling workflow. PLoS Comput. Biol. 14 (9) (2018)
Marwan Abdellah, Juan Hernando, Nicolas Antille, Stefan Eilemann, Henry Markram, Felix Schürmann
Reconstruction and visualization of large-scale volumetric models of neocortical circuits for physically-plausible in silico optical studies. BMC Bioinform. 18 (S-10) (2017)
Marwan Abdellah, Ahmet Bilgili, Stefan Eilemann, Julian C. Shillcock, Henry Markram, Felix Schürmann
Bio-physically plausible visualization of highly scattering fluorescent neocortical models for in silico experimentation. BMC Bioinform. 18 (S-2) (2017)
Michael W. Reimann, Max Nolte, Martina Scolamiero, Katharine Turner, Rodrigo Perin, Giuseppe Chindemi, Pawel Dlotko, Ran Levi, Kathryn Hess, Henry Markram
Cliques of Neurons Bound into Cavities Provide a Missing Link between Structure and Function. Frontiers Comput. Neurosci. 11 (2017)
Marwan Abdellah, Ahmet Bilgili, Stefan Eilemann, Henry Markram, Felix Schürmann
A Physically Plausible Model for Rendering Highly Scattering Fluorescent Participating Media. CoRR (2017)
Lida Kanari, Pawel Dlotko, Martina Scolamiero, Ran Levi, Julian C. Shillcock, Kathryn Hess, Henry Markram
Quantifying topological invariants of neuronal morphologies. CoRR (2016)
Werner Van Geit, Michael Gevaert, Giuseppe Chindemi, Christian Rössert, Jean-Denis Courcol, Eilif B. Müller, Felix Schürmann, Idan Segev, Henry Markram
BluePyOpt: Leveraging Open Source Software and Cloud Infrastructure to Optimise Model Parameters in Neuroscience. Frontiers Neuroinformatics 10 (2016)
Marwan Abdellah, Ahmet Bilgili, Stefan Eilemann, Henry Markram, Felix Schürmann
Physically-based Rendering of Highly Scattering Fluorescent Solutions using Path Tracing. Eurographics (Posters) (2016)
Daniel Keller, Norbert Babai, Olexiy Kochubey, Yunyun Han, Henry Markram, Felix Schürmann, Ralf Schneggenburger
Channels around Docked Vesicles Explains Release Control by Multiple Channels at a CNS Synapse. PLoS Comput. Biol. 11 (5) (2015)
Marwan Abdellah, Ahmet Bilgili, Stefan Eilemann, Henry Markram, Felix Schürmann
A Computational Model of Light-Sheet Fluorescence Microscopy using Physically-based Rendering. Eurographics (Posters) (2015)
Marwan Abdellah, Ahmet Bilgili, Stefan Eilemann, Henry Markram, Felix Schürmann
Physically-based in silico light sheet microscopy for visualizing fluorescent brain models. BMC Bioinform. 16 (S11) (2015)
Michael W. Reimann, James G. King, Eilif B. Müller, Srikanth Ramaswamy, Henry Markram
An algorithm to predict the connectome of neural microcircuits. Frontiers Comput. Neurosci. 9 (2015)
Farhan Tauheed, Thomas Heinis, Felix Schürmann, Henry Markram, Anastasia Ailamaki
OCTOPUS: Efficient query execution on dynamic mesh datasets. ICDE (2014)
Farhan Tauheed, Thomas Heinis, Felix Schürmann, Henry Markram, Anastasia Ailamaki
SCOUT: Prefetching for Latent Feature Following Queries. Proc. VLDB Endow. 5 (11) (2012)
Farhan Tauheed, Thomas Heinis, Felix Schürmann, Henry Markram, Anastasia Ailamaki
SCOUT: Prefetching for Latent Feature Following Queries CoRR (2012)
Dimitri Probst, Wolfgang Maass, Henry Markram, Marc-Oliver Gewaltig
Liquid Computing in a Simplified Model of Cortical Layer IV: Learning to Balance a Ball. ICANN (1) (2012)
Sebastien Lasserre, Juan Hernando, Sean L. Hill, Felix Schürmann, Pedro de Miguel Anasagasti, Georges Abou Jaoudé, Henry Markram
A Neuron Membrane Mesh Representation for Visualization of Electrophysiological Simulations. IEEE Trans. Vis. Comput. Graph. 18 (2) (2012)
Farhan Tauheed, Laurynas Biveinis, Thomas Heinis, Felix Schürmann, Henry Markram, Anastasia Ailamaki
Accelerating Range Queries for Brain Simulations. ICDE (2012)
Henry Markram, Karlheinz Meier, Thomas Lippert, Sten Grillner, Richard S. Frackowiak, Stanislas Dehaene, Alois C. Knoll, Haim Sompolinsky, Kris Verstreken, Javier DeFelipe, Seth Grant, Jean-Pierre Changeux, Alois Saria
Introducing the Human Brain Project. FET (2011)
Etay Hay, Sean L. Hill, Felix Schürmann, Henry Markram, Idan Segev
Models of Neocortical Layer 5b Pyramidal Cells Capturing a Wide Range of Dendritic and Perisomatic Active Properties. PLoS Comput. Biol. 7 (7) (2011)
Shaul Druckmann, Thomas K. Berger, Felix Schürmann, Sean L. Hill, Henry Markram, Idan Segev
Effective Stimuli for Constructing Reliable Neuron Models. PLoS Comput. Biol. 7 (8) (2011)
Rajnish Ranjan, Georges Khazen, Luca Gambazzi, Srikanth Ramaswamy, Sean L. Hill, Felix Schürmann, Henry Markram
Channelpedia: An Integrative and Interactive Database for Ion Channels. Frontiers Neuroinformatics 5 (2011)
Alex Loebel, Gilad Silberberg, Daniela Helbig, Henry Markram, Misha Tsodyks, Magnus J. E. Richardson
Multiquantal release underlies the distribution of synaptic efficacies in the neocortex. Frontiers Comput. Neurosci. 3 (2009)
James G. King, Michael L. Hines, Sean L. Hill, Philip H. Goodman, Henry Markram, Felix Schürmann
A component-based extension framework for large-scale parallel simulations in NEURON. Frontiers Neuroinformatics 3 (2009)
Ofer Melamed, Omri Barak, Gilad Silberberg, Henry Markram, Misha Tsodyks
Slow oscillations in neural networks with facilitating synapses. J. Comput. Neurosci. 25 (2) (2008)
Martin Pospischil, Maria Toledo-Rodriguez, Cyril Monier, Zuzanna Piwkowska, Thierry Bal, Yves Frégnac, Henry Markram, Alain Destexhe
Minimal Hodgkin-Huxley type models for different classes of cortical and thalamic neurons. Biol. Cybern. 99 (4-5) (2008)
Corrado Calì, Thomas K. Berger, Michele Pignatelli, Alan Carleton, Henry Markram, Michele Giugliano
Inferring connection proximity in networks of electrically coupled cells by subthreshold frequency response analysis. J. Comput. Neurosci. 24 (3) (2008)
Shaul Druckmann, Thomas K. Berger, Sean L. Hill, Felix Schürmann, Henry Markram, Idan Segev
Evaluating automated parameter constraining procedures of neuron models by experimental and surrogate data. Biol. Cybern. 99 (4-5) (2008)
Michael L. Hines, Henry Markram, Felix Schürmann
Fully implicit parallel simulation of single neurons. J. Comput. Neurosci. 25 (3) (2008)
James R. Kozloski, Konstantinos Sfyrakis, Sean L. Hill, Felix Schürmann, Charles C. Peck, Henry Markram
Identifying, tabulating, and analyzing contacts between branched neuron morphologies. IBM J. Res. Dev. 52 (1-2) (2008)
Charles C. Peck, James R. Kozloski, Guillermo A. Cecchi, Sean L. Hill, Felix Schürmann, Henry Markram, Ravi Rao
Network-Related Challenges and Insights from Neuroscience. BIOWIRE (2007)
Michele Migliore, C. Cannia, William W. Lytton, Henry Markram, Michael L. Hines
Parallel network simulations with NEURON. J. Comput. Neurosci. 21 (2) (2006)
Henry Markram
Biology - The blue brain project. SC (2006)
Magnus J. E. Richardson, Ofer Melamed, Gilad Silberberg, Wulfram Gerstner, Henry Markram
Short-Term Synaptic Plasticity Orchestrates the Response of Pyramidal Cells and Interneurons to Population Bursts. J. Comput. Neurosci. 18 (3) (2005)
James B. Maciokas, Philip H. Goodman, John Kenyon, Maria Toledo-Rodriguez, Henry Markram
Accurate dynamical models of interneuronal GABAergic channel physiologies. Neurocomputing (2005)
Ofer Melamed, Gilad Silberberg, Henry Markram, Wulfram Gerstner, Magnus J. E. Richardson
Subthreshold cross-correlations between cortical neurons: A reference model with static synapses. Neurocomputing (2005)
Asif Jan Muhammad, Henry Markram
NEOBASE: Databasing the Neocortical Microcircuit. HealthGrid (2005)
Wolfgang Maass, Henry Markram
On the computational power of circuits of spiking neurons. J. Comput. Syst. Sci. 69 (4) (2004)
Stefan Häusler, Henry Markram, Wolfgang Maass
Perspectives of the high-dimensional dynamics of neural microcircuits from the point of view of low-dimensional readouts. Complex. 8 (4) (2003)
Nir Kalisman, Gilad Silberberg, Henry Markram
Deriving physical connectivity from neuronal morphology. Biol. Cybern. 88 (3) (2003)
Wolfgang Maass, Henry Markram
On the Computational Power of Recurrent Circuits of Spiking Neurons Electron. Colloquium Comput. Complex. (022) (2002)
Wolfgang Maass, Henry Markram
Synapses as dynamic memory buffers. Neural Networks 15 (1) (2002)
Wolfgang Maass, Thomas Natschläger, Henry Markram
A Model for Real-Time Computation in Generic Neural Microcircuits. NIPS (2002)
Wolfgang Maass, Robert Legenstein, Henry Markram
A New Approach towards Vision Suggested by Biologically Realistic Neural Microcircuit Models. Biologically Motivated Computer Vision (2002)
Wolfgang Maass, Thomas Natschläger, Henry Markram
Real-Time Computing Without Stable States: A New Framework for Neural Computation Based on Perturbations. Neural Comput. 14 (11) (2002)
Stephen Grossberg, Wolfgang Maass, Henry Markram
Introduction: Spiking Neurons in Neuroscience and Technology. Neural Networks 14 (6-7) (2001)
Walter Senn, Henry Markram, Misha Tsodyks
An Algorithm for Modifying Neurotransmitter Release Probability Based on Pre- and Postsynaptic Spike Timing. Neural Comput. 13 (1) (2001)
Henry Markram, Arnd Roth, Fritjof Helmchen
Competitive Calcium Binding: Implications for Dendritic Calcium Signaling. J. Comput. Neurosci. 5 (3) (1998)
Misha Tsodyks, Klaus Pawelzik, Henry Markram
Neural Networks with Dynamic Synapses. Neural Comput. 10 (4) (1998)
Henry Markram, Misha Tsodyks
The Information Content of Action Potential Trains - A Synaptic Basis. ICANN (1997)
Walter Senn, Misha Tsodyks, Henry Markram
An Algorithm for Synaptic Modification Based on Exact Timing of Pre- and Post-Synaptic Action Potentials. ICANN (1997)
Misha Tsodyks, Henry Markram
Plasticity of Neocortical Synapses Enables Transitions between Rate and Temporal Coding. ICANN (1996)