Samuel Kerrien

Publication Activity (10 Years)

Years Active: 2004-2023
Publications (10 Years): 2

Top Topics

Semantic Web Technologies

Knowledge Acquisition

Graph Representation

Top Venues

ISWC (Posters/Demos/Industry)

Publications

Mohameth-François Sy, Bogdan Roman, Samuel Kerrien, Didac Montero Mendez, Henry Genet, Wojciech Wajerowicz, Michaël Dupont, Ian Lavriushev, Julien Machon, Kenneth Pirman, Dhanesh Neela Mana, Natalia Stafeeva, Anna-Kristin Kaufmann, Huanxiang Lu, Jonathan Lurie, Pierre-Alexandre Fonta, Alejandra Garcia Rojas Martinez, Alexander D. Ulbrich, Carolina Lindqvist, Silvia Jimenez, David J. Rotenberg, Henry Markram, Sean L. Hill
Blue Brain Nexus: An open, secure, scalable system for knowledge graph management and data-driven science. Semantic Web 14 (4) (2023)
Cristina E. Gonzalez-Espinoza, Anna-Kristin Kaufmann, Eugenia Oshurko, Alejandra Garcia Rojas Martinez, Sarah Mouffok, Konstantinos Platis, Jonathan Lurie, Jayakrishnan Nair, Patrycja Lurie, Silvia Jimenez, Pierre-Alexandre Fonta, Huanxiang Lu, Nabil Alibou, Mohameth-François Sy, Bogdan Roman, Samuel Kerrien, Henry Markram, Sean L. Hill
Blue Brain Knowledge Graph: Leveraging Semantic Web Technologies for Simulation Neuroscience. ISWC (Posters/Demos/Industry) (2023)
Pablo Porras, Paola Roncaglia, Emily Dimmer, Jane Lomax, Rachael P. Huntley, Sandra E. Orchard, Marine Dumousseau, Samuel Kerrien, Henning Hermjakob
The Apoptosis Gene Ontology project and the IntAct-Apoptosis dataset: updating the conceptual representation of apoptosis. IWBBIO (2013)
Kim Van Roey, Sandra E. Orchard, Samuel Kerrien, Marine Dumousseau, Sylvie Ricard-Blum, Henning Hermjakob, Toby J. Gibson
Capturing cooperative interactions with the PSI-MI format. Database J. Biol. Databases Curation 2013 (2013)
Samuel Kerrien, Bruno Aranda, Lionel Breuza, Alan Bridge, Fiona Broackes-Carter, Carol Chen, Margaret J. Duesbury, Marine Dumousseau, Marc Feuermann, Ursula Hinz, Christine Jandrasits, Rafael C. Jimenez, Jyoti Khadake, Usha Mahadevan, Patrick Masson, Ivo Pedruzzi, Eric Pfeiffenberger, Pablo Porras, Arathi Raghunath, Bernd Roechert, Sandra E. Orchard, Henning Hermjakob
The IntAct molecular interaction database in 2012. Nucleic Acids Res. 40 (Database-Issue) (2012)
Bruno Aranda, P. Achuthan, Yasmin Alam-Faruque, Irina M. Armean, Alan Bridge, C. Derow, Marc Feuermann, A. T. Ghanbarian, Samuel Kerrien, Jyoti Khadake, J. Kerssemakers, C. Leroy, M. Menden, Magali Michaut, Luisa Montecchi-Palazzi, S. N. Neuhauser, Sandra E. Orchard, V. Perreau, Bernd Roechert, K. van Eijk, Henning Hermjakob
The IntAct molecular interaction database in 2010. Nucleic Acids Res. 38 (Database-Issue) (2010)
Magali Michaut, Samuel Kerrien, Luisa Montecchi-Palazzi, Corinne Cassier-Chauvat, Franck Chauvat, Jean-Christophe Aude, Pierre Legrain, Henning Hermjakob
InteroPORC: an automated tool to predict highly conserved protein interaction networks. BMC Bioinform. 9 (S-10) (2008)
Tony Chiang, Nianhua Li, Sandra E. Orchard, Samuel Kerrien, Henning Hermjakob, Robert Gentleman, Wolfgang Huber
Rintact: enabling computational analysis of molecular interaction data from the IntAct repository. Bioinform. 24 (8) (2008)
Magali Michaut, Samuel Kerrien, Luisa Montecchi-Palazzi, Franck Chauvat, Corinne Cassier-Chauvat, Jean-Christophe Aude, Pierre Legrain, Henning Hermjakob
InteroPORC: automated inference of highly conserved protein interaction networks. Bioinform. 24 (14) (2008)
Samuel Kerrien, Yasmin Alam-Faruque, Bruno Aranda, I. Bancarz, Alan Bridge, C. Derow, Emily Dimmer, Marc Feuermann, A. Friedrichsen, Rachael P. Huntley, C. Kohler, Jyoti Khadake, C. Leroy, A. Liban, C. Lieftink, Luisa Montecchi-Palazzi, Sandra E. Orchard, Judith E. Risse, Karine Robbe, Bernd Roechert, David Thorneycroft, Y. Zhang, Rolf Apweiler, Henning Hermjakob
IntAct - open source resource for molecular interaction data. Nucleic Acids Res. 35 (Database-Issue) (2007)
Richard G. Côté, Philip Jones, Lennart Martens, Samuel Kerrien, Florian Reisinger, Quan Lin, Rasko Leinonen, Rolf Apweiler, Henning Hermjakob
The Protein Identifier Cross-Referencing (PICR) service: reconciling protein identifiers across multiple source databases. BMC Bioinform. 8 (2007)
Samuel Kerrien, Henning Hermjakob
Development and implementation of the PSI MI standard for molecular interaction. WSC (2006)
Henning Hermjakob, Luisa Montecchi-Palazzi, Chris Lewington, Sugath Mudali, Samuel Kerrien, Sandra E. Orchard, Martin Vingron, Bernd Roechert, Peter Roepstorff, Alfonso Valencia, Hanah Margalit, John Armstrong, Amos Bairoch, Gianni Cesareni, David James Sherman, Rolf Apweiler
IntAct: an open source molecular interaction database. Nucleic Acids Res. 32 (Database-Issue) (2004)