Andrew P. Davison

Publication Activity (10 Years)

Years Active: 1999-2024
Publications (10 Years): 12

Top Topics

Data Management

Neural Mechanisms

Top Venues

Frontiers Neuroinformatics

PLoS Comput. Biol.

Publications

Onur Ates, Shailesh Appukuttan, Hélissande Fragnaud, Corentin Fragnaud, Andrew P. Davison
NeoViewer: Facilitating reuse of electrophysiology data through browser-based interactive visualization. SoftwareX 26 (2024)
Shailesh Appukuttan, Luca Leonardo Bologna, Felix Schürmann, Michele Migliore, Andrew P. Davison
EBRAINS Live Papers - Interactive Resource Sheets for Computational Studies in Neuroscience. Neuroinformatics 21 (1) (2023)
Luca Leonardo Bologna, Roberto Smiriglia, Carmen Alina Lupascu, Shailesh Appukuttan, Andrew P. Davison, Genrich Ivaska, Jean-Denis Courcol, Michele Migliore
The EBRAINS Hodgkin-Huxley Neuron Builder: An online resource for building data-driven neuron models. Frontiers Neuroinformatics 16 (2022)
Sára Sáray, Christian A. Rössert, Shailesh Appukuttan, Rosanna Migliore, Paola Vitale, Carmen Alina Lupascu, Luca Leonardo Bologna, Werner Van Geit, Armando Romani, Andrew P. Davison, Eilif Muller, Tamás F. Freund, Szabolcs Káli
HippoUnit: A software tool for the automated testing and systematic comparison of detailed models of hippocampal neurons based on electrophysiological data. PLoS Comput. Biol. 17 (1) (2021)
Sharon M. Crook, Andrew P. Davison, Robert A. McDougal, Hans Ekkehard Plesser
Editorial: Reproducibility and Rigour in Computational Neuroscience. Frontiers Neuroinformatics 14 (2020)
Kael Dai, Juan Hernando, Yazan N. Billeh, Sergey L. Gratiy, Judit Planas, Andrew P. Davison, Salvador Dura-Bernal, Padraig Gleeson, Adrien Devresse, Benjamin K. Dichter, Michael Gevaert, James G. King, Werner Van Geit, Arseny V. Povolotsky, Eilif Müller, Jean-Denis Courcol, Anton Arkhipov
The SONATA data format for efficient description of large-scale network models. PLoS Comput. Biol. 16 (2) (2020)
Ján Antolík, Andrew P. Davison
Arkheia: Data Management and Communication for Open Computational Neuroscience. Frontiers Neuroinformatics 12 (2018)
Inga Blundell, Romain Brette, Thomas A. Cleland, Thomas G. Close, Daniel Coca, Andrew P. Davison, Sandra Diaz-Pier, Carlos Fernandez Musoles, Padraig Gleeson, Dan F. M. Goodman, Michael L. Hines, Michael W. Hopkins, Pramod S. Kumbhar, David R. Lester, Bóris Marin, Abigail Morrison, Eric Müller, Thomas Nowotny, Alexander Peyser, Dimitri Plotnikov, Paul Richmond, Andrew Rowley, Bernhard Rumpe, Marcel Stimberg, Alan B. Stokes, Adam R. Tomkins, Guido Trensch, Michael Marmaduke Woodman, Jochen Martin Eppler
Code Generation in Computational Neuroscience: A Review of Tools and Techniques. Frontiers Neuroinformatics 12 (2018)
Nicolas P. Rougier, Konrad Hinsen, Frédéric Alexandre, Thomas Arildsen, Lorena A. Barba, Fabien C. Y. Benureau, C. Titus Brown, Pierre de Buyl, Ozan Caglayan, Andrew P. Davison, Marc-André Delsuc, Georgios Detorakis, Alexandra K. Diem, Damien Drix, Pierre Enel, Benoît Girard, Olivia Guest, Matt G. Hall, Rafael Neto Henriques, Xavier Hinaut, Kamil S. Jaron, Mehdi Khamassi, Almar Klein, Tiina Manninen, Pietro Marchesi, Dan McGlinn, Christoph Metzner, Owen L. Petchey, Hans Ekkehard Plesser, Timothée Poisot, Karthik Ram, Yoav Ram, Etienne B. Roesch, Cyrille Rossant, Vahid Rostami, Aaron Shifman, Joseph Stachelek, Marcel Stimberg, Frank Stollmeier, Federico Vaggi, Guillaume Viejo, Julien Vitay, Anya E. Vostinar, Roman Yurchak, Tiziano Zito
Sustainable computational science: the ReScience initiative. PeerJ Comput. Sci. 3 (2017)
Nicolas P. Rougier, Konrad Hinsen, Frédéric Alexandre, Thomas Arildsen, Lorena A. Barba, Fabien C. Y. Benureau, C. Titus Brown, Pierre de Buyl, Ozan Caglayan, Andrew P. Davison, Marc-André Delsuc, Georgios Detorakis, Alexandra K. Diem, Damien Drix, Pierre Enel, Benoît Girard, Olivia Guest, Matt G. Hall, Rafael Neto Henriques, Xavier Hinaut, Kamil S. Jaron, Mehdi Khamassi, Almar Klein, Tiina Manninen, Pietro Marchesi, Dan McGlinn, Christoph Metzner, Owen L. Petchey, Hans Ekkehard Plesser, Timothée Poisot, Karthik Ram, Yoav Ram, Etienne B. Roesch, Cyrille Rossant, Vahid Rostami, Aaron Shifman, Joseph Stachelek, Marcel Stimberg, Frank Stollmeier, Federico Vaggi, Guillaume Viejo, Julien Vitay, Anya E. Vostinar, Roman Yurchak, Tiziano Zito
Sustainable computational science: the ReScience initiative. CoRR (2017)
Friedrich T. Sommer, Thomas Wachtler, Jeffrey L. Teeters, Jan Benda, Andrew P. Davison, Stephen J. Eglen, Richard C. Gerkin, Jeffrey S. Grethe, Jan Grewe, Kenneth D. Harris, Christian Johannes Kellner, Yann Le Franc, Roman Moucek, Dimiter Prodanov, Robert Pröpper, Hyrum L. Sessions, Leslie Smith, Andrey Sobolev, Adrian Stoewer, Barry Wark
Requirements for storing electrophysiology data. CoRR (2016)
Johanna Senk, Alper Yegenoglu, Olivier Amblet, Yury Brukau, Andrew P. Davison, David Roland Lester, Anna Lührs, Pietro Quaglio, Vahid Rostami, Andrew Rowley, Bernd Schuller, Alan Barry Stokes, Sacha Jennifer van Albada, Daniel Zielasko, Markus Diesmann, Benjamin Weyers, Michael Denker, Sonja Grün
A Collaborative Simulation-Analysis Workflow for Computational Neuroscience Using HPC. JHPCS (2016)
Michael Vella, Robert C. Cannon, Sharon M. Crook, Andrew P. Davison, Gautham Ganapathy, Hugh P. C. Robinson, R. Angus Silver, Padraig Gleeson
libNeuroML and PyLEMS: using Python to combine procedural and declarative modeling approaches in computational neuroscience. Frontiers Neuroinformatics 8 (2014)
Samuel Garcia, Domenico Guarino, Florent Jaillet, Todd R. Jennings, Robert Pröpper, Philipp L. Rautenberg, Chris C. Rodgers, Andrey Sobolev, Thomas Wachtler, Pierre Yger, Andrew P. Davison
Neo: an object model for handling electrophysiology data in multiple formats. Frontiers Neuroinformatics 8 (2014)
Mikael Djurfeldt, Andrew P. Davison, Jochen Martin Eppler
Efficient generation of connectivity in neuronal networks from simulator-independent descriptions. Frontiers Neuroinformatics 8 (2014)
Eilif B. Müller, James A. Bednar, Markus Diesmann, Marc-Oliver Gewaltig, Michael L. Hines, Andrew P. Davison
Python in neuroscience. Frontiers Neuroinformatics 9 (2014)
Ján Antolík, Andrew P. Davison
Integrated workflows for spiking neuronal network simulations. Frontiers Neuroinformatics 7 (2013)
Andrew P. Davison
Automated Capture of Experiment Context for Easier Reproducibility in Computational Research. Comput. Sci. Eng. 14 (4) (2012)
Daniel Brüderle, Mihai A. Petrovici, Bernhard Vogginger, Matthias Ehrlich, Thomas Pfeil, Sebastian Millner, Andreas Grübl, Karsten Wendt, Eric Müller, Marc-Olivier Schwartz, Dan Husmann de Oliveira, Sebastian Jeltsch, Johannes Fieres, Moritz Schilling, Paul Müller, Oliver Breitwieser, Venelin Petkov, Lyle Muller, Andrew P. Davison, Pradeep Krishnamurthy, Jens Kremkow, Mikael Lundqvist, Eilif Mueller, Johannes Partzsch, Stefan Scholze, Lukas Zühl, Christian Mayr, Alain Destexhe, Markus Diesmann, Tobias C. Potjans, Anders Lansner, René Schüffny, Johannes Schemmel, Karlheinz Meier
A comprehensive workflow for general-purpose neural modeling with highly configurable neuromorphic hardware systems. Biol. Cybern. 104 (4-5) (2011)
Padraig Gleeson, Sharon M. Crook, Robert C. Cannon, Michael L. Hines, Guy O. Billings, Matteo Farinella, Thomas M. Morse, Andrew P. Davison, Subhasis Ray, Upinder S. Bhalla, Simon R. Barnes, Yoana D. Dimitrova, Angus Silver
NeuroML: A Language for Describing Data Driven Models of Neurons and Networks with a High Degree of Biological Detail. PLoS Comput. Biol. 6 (6) (2010)
Daniel Brüderle, Eric Müller, Andrew P. Davison, Eilif B. Müller, Johannes Schemmel, Karlheinz Meier
Establishing a novel modeling tool: a python-based interface for a neuromorphic hardware system. Frontiers Neuroinformatics 3 (2009)
Michael L. Hines, Andrew P. Davison, Eilif B. Müller
NEURON and Python. Frontiers Neuroinformatics 3 (2009)
Andrew P. Davison, Daniel Brüderle, Jochen M. Eppler, Jens Kremkow, Eilif B. Müller, Dejan Pecevski, Laurent U. Perrinet, Pierre Yger
PyNN: a common interface for neuronal network simulators. Frontiers Neuroinformatics 2 (2008)
Romain Brette, Michelle Rudolph, Ted Carnevale, Michael L. Hines, David Beeman, James M. Bower, Markus Diesmann, Abigail Morrison, Philip H. Goodman, Frederick C. Harris Jr., Milind Zirpe, Thomas Natschläger, Dejan Pecevski, Bard Ermentrout, Mikael Djurfeldt, Anders Lansner, Olivier Rochel, Thierry Viéville, Eilif Mueller, Andrew P. Davison, Sami El Boustani, Alain Destexhe
Simulation of networks of spiking neurons: A review of tools and strategies. J. Comput. Neurosci. 23 (3) (2007)
Mathilde Badoual, Quan Zou, Andrew P. Davison, Michael Rudolph, Thierry Bal, Yves Frégnac, Alain Destexhe
Biophysical and Phenomenological Models of Multiple Spike Interactions in Spike-timing Dependent Plasticity. Int. J. Neural Syst. 16 (2) (2006)
Andrew P. Davison, Thomas M. Morse, Michele Migliore, Gordon M. Shepherd, Michael L. Hines
Semi-automated population of an online database of neuronal models (ModelDB) with citation information, using PubMed for validation. Neuroinformatics 2 (3) (2004)
Michele Migliore, Thomas M. Morse, Andrew P. Davison, Luis N. Marenco, Gordon M. Shepherd, Michael L. Hines
ModelDB - Making models publicly accessible to support computational neuroscience. Neuroinformatics 1 (1) (2003)
Andrew P. Davison, Jianfeng Feng, David Brown
Spike synchronization in a biophysically-detailed model of the olfactory bulb. Neurocomputing (2001)
Andrew P. Davison, Jianfeng Feng, David Brown
Structure of Lateral Inhibition in an Olfactory Bulb Model. IWANN (1) (1999)