Erik De Schutter

Publication Activity (10 Years)

Years Active: 1993-2023
Publications (10 Years): 18

Top Topics

Biologically Plausible

Computational Neuroscience

Top Venues

Neuroinformatics

Frontiers Neuroinformatics

PLoS Comput. Biol.

Publications

Erik De Schutter
Efficient simulation of neural development using shared memory parallelization. Frontiers Neuroinformatics 17 (2023)
Mizuki Kato, Erik De Schutter
Models of Purkinje cell dendritic tree selection during early cerebellar development. PLoS Comput. Biol. 19 (7) (2023)
Sergio Oscar Verduzco-Flores, William Dorrell, Erik De Schutter
A differential Hebbian framework for biologically-plausible motor control. Neural Networks 150 (2022)
Weiliang Chen, Tristan Carel, Omar Awile, Nicola Cantarutti, Giacomo Castiglioni, Alessandro Cattabiani, Baudouin Del Marmol, Iain Hepburn, James G. King, Christos Kotsalos, Pramod S. Kumbhar, Jules Lallouette, Samuel Melchior, Felix Schürmann, Erik De Schutter
STEPS 4.0: Fast and memory-efficient molecular simulations of neurons at the nanoscale. Frontiers Neuroinformatics 16 (2022)
Audrey Denizot, Corrado Calì, Hugues Berry, Erik De Schutter
Stochastic Spatially-Extended Simulations Predict the Effect of ER Distribution on Astrocytic Microdomain Ca2+ Activity. NANOCOM (2021)
Giorgio A. Ascoli, David N. Kennedy, Erik De Schutter
Farewell, Neuroinformatics! Neuroinformatics 19 (4) (2021)
Dongqi Han, Erik De Schutter, Sungho Hong
Lamina-specific neuronal properties promote robust, stable signal propagation in feedforward networks. CoRR (2020)
Ines Wichert, Sanghun Jee, Erik De Schutter, Sungho Hong
Pycabnn: Efficient and Extensible Software to Construct an Anatomical Basis for a Physiologically Realistic Neural Network Model. Frontiers Neuroinformatics 14 (2020)
Dongqi Han, Erik De Schutter, Sungho Hong
Lamina-specific neuronal properties promote robust, stable signal propagation in feedforward networks. NeurIPS (2020)
Shyam Kumar Sudhakar, Sungho Hong, Ivan Raikov, Rodrigo Publio, Claus Lang, Thomas G. Close, Daqing Guo, Mario Negrello, Erik De Schutter
Correction: Spatiotemporal network coding of physiological mossy fiber inputs by the cerebellar granular layer. PLoS Comput. Biol. 15 (10) (2019)
Erik De Schutter
Fallacies of Mice Experiments. Neuroinformatics 17 (2) (2019)
Sergio Oscar Verduzco-Flores, Erik De Schutter
Draculab: A Python Simulator for Firing Rate Neural Networks With Delayed Adaptive Connections. Frontiers Neuroinformatics 13 (2019)
Erik De Schutter
Deep Learning and Computational Neuroscience. Neuroinformatics 16 (1) (2018)
Weiliang Chen, Erik De Schutter
Time to Bring Single Neuron Modeling into 3D. Neuroinformatics 15 (1) (2017)
Shyam Kumar Sudhakar, Sungho Hong, Ivan Raikov, Rodrigo Publio, Claus Lang, Thomas G. Close, Daqing Guo, Mario Negrello, Erik De Schutter
Spatiotemporal network coding of physiological mossy fiber inputs by the cerebellar granular layer. PLoS Comput. Biol. 13 (9) (2017)
Weiliang Chen, Erik De Schutter
Parallel STEPS: Large Scale Stochastic Spatial Reaction-Diffusion Simulation with High Performance Computers. Frontiers Neuroinformatics 11 (2017)
Weiliang Chen, Erik De Schutter
Parallel STEPS: Large Scale Stochastic Spatial Reaction-Diffusion Simulation with High Performance Computers. CoRR (2016)
Erik De Schutter
Neuroinformatics for Degenerate Brains. Neuroinformatics 14 (1) (2016)
João Couto, Daniele Linaro, Erik De Schutter, Michele Giugliano
. PLoS Comput. Biol. 11 (3) (2015)
Shyam Kumar Sudhakar, Benjamin Torben-Nielsen, Erik De Schutter
Cerebellar Nuclear Neurons Use Time and Rate Coding to Transmit Purkinje Neuron Pauses. PLoS Comput. Biol. 11 (12) (2015)
Erik De Schutter
The Missing Piece of the Puzzle: Neuroinformatics at the Bench. Neuroinformatics 13 (2) (2015)
Iain Hepburn, Weiliang Chen, Erik De Schutter
Accurate Reaction-Diffusion Operator Splitting on Tetrahedral Meshes for Parallel Stochastic Molecular Simulations. CoRR (2015)
Cory M. Simon, Iain Hepburn, Weiliang Chen, Erik De Schutter
The role of dendritic spine morphology in the compartmentalization and delivery of surface receptors. J. Comput. Neurosci. 36 (3) (2014)
Weiliang Chen, Erik De Schutter
Python-based geometry preparation and simulation visualization toolkits for STEPS. Frontiers Neuroinformatics 8 (2014)
Erik De Schutter
The Dangers of Plug-and-Play Simulation Using Shared Models. Neuroinformatics 12 (2) (2014)
Erik De Schutter
Collaborative Modeling in Neuroscience: Time to Go Open Model? Neuroinformatics 11 (2) (2013)
Erik De Schutter
The importance of stochastic signaling processes in the induction of long-term synaptic plasticity. Neural Networks 47 (2013)
Iain Hepburn, Robert C. Cannon, Erik De Schutter
Efficient calculation of the quasi-static electrical potential on a tetrahedral mesh and its implementation in STEPS. Frontiers Comput. Neurosci. 7 (2013)
Ivan Raikov, Erik De Schutter
The Promise and Shortcomings of XML as an Interchange Format for Computational Models of Biology. Neuroinformatics 10 (1) (2012)
Erik De Schutter, Giorgio A. Ascoli, David N. Kennedy
Ten Years of Neuroinformatics. Neuroinformatics 10 (4) (2012)
Iain Hepburn, Weiliang Chen, Stefan Wils, Erik De Schutter
STEPS: efficient simulation of stochastic reaction-diffusion models in realistic morphologies. BMC Syst. Biol. 6 (2012)
Yihwa Kim, Robert Sinclair, Nol Chindapol, Jaap A. Kaandorp, Erik De Schutter
Geometric Theory Predicts Bifurcations in Minimal Wiring Cost Trees in Biology Are Flat. PLoS Comput. Biol. 8 (4) (2012)
Ivan Raikov, Erik De Schutter
The Layer-Oriented Approach to Declarative Languages for Biological Modeling. PLoS Comput. Biol. 8 (5) (2012)
David N. Kennedy, Giorgio A. Ascoli, Erik De Schutter
Next Steps in Data Publishing. Neuroinformatics 9 (4) (2011)
Volker Steuber, Nathan W. Schultheiss, Angus Silver, Erik De Schutter, Dieter Jaeger
Determinants of synaptic integration and heterogeneity in rebound firing explored with data-driven models of deep cerebellar nucleus cells. J. Comput. Neurosci. 30 (3) (2011)
Erik De Schutter
Data Publishing and Scientific Journals: The Future of the Scientific Paper in a World of Shared Data. Neuroinformatics 8 (3) (2010)
Erik De Schutter
The International Neuroinformatics Coordinating Facility: Evaluating the First Years. Neuroinformatics 7 (3) (2009)
Stefan Wils, Erik De Schutter
STEPS: modeling and simulating complex reaction-diffusion systems with Python. Frontiers Neuroinformatics 3 (2009)
Erik De Schutter, Giorgio A. Ascoli, David N. Kennedy
Review of Papers Describing Neuroinformatics Software. Neuroinformatics 7 (4) (2009)
Erik De Schutter
Reviewing Multi-Disciplinary Papers: a Challenge in Neuroscience? Neuroinformatics 6 (4) (2008)
Erik De Schutter
Why Are Computational Neuroscience and Systems Biology So Separate? PLoS Comput. Biol. 4 (5) (2008)
Pablo Achard, Erik De Schutter
Calcium, synaptic plasticity and intrinsic homeostasis in Purkinje neuron models. Frontiers Comput. Neurosci. 2 (2008)
Werner Van Geit, Erik De Schutter, Pablo Achard
Automated neuron model optimization techniques: a review. Biol. Cybern. 99 (4-5) (2008)
Hugo Cornelis, Erik De Schutter
Neurospaces: Towards automated model partitioning for parallel computers. Neurocomputing 70 (10-12) (2007)
Erik De Schutter
A second look back. Neuroinformatics 5 (1) (2007)
Robert C. Cannon, Marc-Oliver Gewaltig, Padraig Gleeson, Upinder S. Bhalla, Hugo Cornelis, Michael L. Hines, Fredrick W. Howell, Eilif Mueller, Joel R. Stiles, Stefan Wils, Erik De Schutter
Interoperability of Neuroscience Modeling Software: Current Status and Future Directions. Neuroinformatics 5 (2) (2007)
Werner Van Geit, Pablo Achard, Erik De Schutter
Neurofitter: a parameter tuning package for a wide range of electrophysiological neuron models. Frontiers Neuroinformatics 1 (2007)
Erik De Schutter
Neuroscience Leading the Way: Reviews Cascade by the INCF. Neuroinformatics 5 (4) (2007)
Erik De Schutter, Giorgio A. Ascoli, David N. Kennedy
On the future of the human brain project. Neuroinformatics 4 (2) (2006)
Pablo Achard, Erik De Schutter
Complex Parameter Landscape for a Complex Neuron Model. PLoS Comput. Biol. 2 (7) (2006)
Ulrich G. Hofmann, Andre Folkers, Florian Mösch, Thomas Malina, Kerstin M. L. Menne, Gerardo Biella, Patriq Fagerstedt, Erik De Schutter, Winnie Jensen, Ken Yoshida, Dirk Hoehl, Uwe Thomas, Maria G. Kindlundh, Peter Norlin, Marco de Curtis
A Novel High Channel-Count System for Acute Multisite Neuronal Recordings. IEEE Trans. Biomed. Eng. 53 (8) (2006)
Michiel Berends, Reinoud Maex, Erik De Schutter
The Effect of NMDA Receptors on Gain Modulation. Neural Comput. 17 (12) (2005)
Erik De Schutter
Changes and opportunities. Neuroinformatics 3 (2) (2005)
Erik De Schutter
Computational Neuroscience: Trends in Research 2005. Neurocomputing (2005)
Michiel Berends, Reinoud Maex, Erik De Schutter
A detailed three-dimensional model of the cerebellar granular layer. Neurocomputing (2004)
Erik De Schutter
A look back. Neuroinformatics 2 (1) (2004)
Volker Steuber, Erik De Schutter, Dieter Jaeger
Passive models of neurons in the deep cerebellar nuclei: the effect of reconstruction errors. Neurocomputing (2004)
Hugo Cornelis, Erik De Schutter
Neurospaces parameter handling. Neurocomputing (2004)
Erik De Schutter
Computational Neuroscience: Trends in research 2004. Neurocomputing (2004)
Dionyssios Theofilou, Volker Steuber, Erik De Schutter
Novelty detection in a Kohonen-like network with a long-term depression learning rule. Neurocomputing (2003)
Sergio Solinas, Reinoud Maex, Erik De Schutter
Synchronization of Purkinje cell pairs along the parallel fiber axis: a model. Neurocomputing (2003)
Kristl G. Claeys, Guy A. Orban, Patrick Dupont, Stefan Sunaert, Paul Van Hecke, Erik De Schutter
Involvement of multiple functionally distinct cerebellar regions in visual discrimination: a human functional imaging study. NeuroImage 20 (2) (2003)
Peter Eckersley, Gary F. Egan, Erik De Schutter, Yiyuan Tang, Mirko Novak, Václav Sebesta, Line Matthiessen, Iiro P. Jääskeläinen, Ulla Ruotsalainen, Andreas V. M. Herz, K. Peter Hoffmann, Raphael Ritz, Viji Ravindranath, Francesco Beltrame, Shun-ichi Amari, Shiro Usui, Soo-Young Lee, Jaap van Pelt, Jan G. Bjaalie, Andrzej Wróbel, Fernando Mira da Silva, Carmen González, Sten Grillner, Paul F. M. J. Verschure, Turgay Dalkara, Robert Bennett, David Willshaw, Stephen H. Koslow, Perry L. Miller, Shankar Subramaniam, Arthur W. Toga
Neuroscience data and tool sharing - A legal and policy framework for neuroinformatics. Neuroinformatics 1 (2) (2003)
Giorgio A. Ascoli, Erik De Schutter, David N. Kennedy
An information science infrastructure for neuroscience. Neuroinformatics 1 (1) (2003)
Hugo Cornelis, Erik De Schutter
NeuroSpaces: separating modeling and simulation. Neurocomputing (2003)
Volker Steuber, Erik De Schutter
Rank order decoding of temporal parallel fibre input patterns in a complex Purkinje cell model. Neurocomputing (2002)
Fidel Santamaría, Dieter Jaeger, Erik De Schutter, James M. Bower
Modulatory Effects of Parallel Fiber and Molecular Layer Interneuron Synaptic Activity on Purkinje Cell Responses to Ascending Segment Input: A Modeling Study. J. Comput. Neurosci. 13 (3) (2002)
Nigel H. Goddard, David Beeman, Robert C. Cannon, Hugo Cornelis, Marc-Oliver Gewaltig, Greg Hood, Fredrick W. Howell, P. Rogister, Erik De Schutter, K. Shankar, Michael Hucka
NeuroML for plug and play neuronal modeling. Neurocomputing (2002)
Volker Steuber, Erik De Schutter
Long-term depression and recognition of parallel fibre patterns in a multi-compartmental model of a cerebellar Purkinje cell. Neurocomputing (2001)
Paul Franck, Reinoud Maex, Erik De Schutter
Synchronization between patches of local excitation in a cerebellar granular layer model. Neurocomputing (2001)
Nigel H. Goddard, Greg Hood, Fredrick W. Howell, Michael L. Hines, Erik De Schutter
NEOSIM: Portable large-scale plug and play modelling. Neurocomputing (2001)
Fredrick W. Howell, Jonas Dyhrfjeld-Johnsen, Reinoud Maex, Nigel H. Goddard, Erik De Schutter
A large-scale model of the cerebellar cortex using PGENESIS. Neurocomputing (2000)
Farzan Nadim, Øystein H. Olsen, Erik De Schutter, Ronald L. Calabrese
Modeling the leech heartbeat elemental oscillator I. Interactions of intrinsic and synaptic currents. J. Comput. Neurosci. 2 (3) (1995)
C. Staub, Erik De Schutter, Thomas Knöpfel
Voltage-imaging and simulation of effects of voltage- and agonist-activated conductances on soma-dendritic voltage coupling in cerebellar Purkinje cells. J. Comput. Neurosci. 1 (4) (1994)
Erik De Schutter, James M. Bower
Permeability of NMDA Channels: A Model of Long-Term Potentiation in Hippocampal Neurons. Neural Comput. 5 (5) (1993)