Lana Yeganova

Publication Activity (10 Years)

Years Active: 2003-2023
Publications (10 Years): 21

Top Topics

Medline Abstracts

Biomedical Literature

Clustering Algorithm

Biomedical Information Retrieval

Top Venues

J. Biomed. Informatics

Publications

Qiao Jin, Won Kim, Qingyu Chen, Donald C. Comeau, Lana Yeganova, W. John Wilbur, Zhiyong Lu
BioCPT: Contrastive Pre-trained Transformers with Large-scale PubMed Search Logs for Zero-shot Biomedical Information Retrieval. CoRR (2023)
Shubo Tian, Qiao Jin, Lana Yeganova, Po-Ting Lai, Qingqing Zhu, Xiuying Chen, Yifan Yang, Qingyu Chen, Won Kim, Donald C. Comeau, Rezarta Islamaj, Aadit Kapoor, Xin Gao, Zhiyong Lu
Opportunities and Challenges for ChatGPT and Large Language Models in Biomedicine and Health. CoRR (2023)
Mariana L. Neves, Antonio Jimeno-Yepes, Aurélie Névéol, Rachel Bawden, Giorgio Maria Di Nunzio, Roland Roller, Philippe Thomas, Federica Vezzani, Maika Vicente Navarro, Lana Yeganova, Dina Wiemann, Cristian Grozea
Findings of the WMT 2023 Biomedical Translation Shared Task: Evaluation of ChatGPT 3.5 as a Comparison System. WMT (2023)
Qiao Jin, Won Kim, Qingyu Chen, Donald C. Comeau, Lana Yeganova, W. John Wilbur, Zhiyong Lu
MedCPT: Contrastive Pre-trained Transformers with large-scale PubMed search logs for zero-shot biomedical information retrieval. Bioinform. 39 (10) (2023)
Mariana Neves, Antonio Jimeno-Yepes, Amy Siu, Roland Roller, Philippe Thomas, Maika Vicente Navarro, Lana Yeganova, Dina Wiemann, Giorgio Maria Di Nunzio, Federica Vezzani, Christel Gerardin, Rachel Bawden, Darryl Estrada, Salvador Lima-López, Eulàlia Farré-Maduell, Martin Krallinger, Cristian Grozea, Aurélie Névéol
Findings of the WMT 2022 Biomedical Translation Shared Task: Monolingual Clinical Case Reports. WMT (2022)
Won Kim, Lana Yeganova, Donald C. Comeau, W. John Wilbur, Zhiyong Lu
Towards a unified search: Improving PubMed retrieval with full text. J. Biomed. Informatics 134 (2022)
Lana Yeganova, Won Kim, Donald C. Comeau, W. John Wilbur, Zhiyong Lu
Measuring the relative importance of full text sections for information retrieval from scientific literature. BioNLP@NAACL-HLT (2021)
Lana Yeganova, Dina Wiemann, Mariana L. Neves, Federica Vezzani, Amy Siu, Inigo Jauregi Unanue, Maite Oronoz, Nancy Mah, Aurélie Névéol, David Martínez, Rachel Bawden, Giorgio Maria Di Nunzio, Roland Roller, Philippe Thomas, Cristian Grozea, Olatz Perez-de-Viñaspre, Maika Vicente Navarro, Antonio Jimeno-Yepes
Findings of the WMT 2021 Biomedical Translation Shared Task: Summaries of Animal Experiments as New Test Set. WMT@EMNLP (2021)
Lana Yeganova, Won Kim, Donald C. Comeau, W. John Wilbur, Zhiyong Lu
Improving PubMed Retrieval by Integrating Abstract and Full Text Search. AMIA (2021)
Lana Yeganova, Sun Kim, Qingyu Chen, Grigory Balasanov, W. John Wilbur, Zhiyong Lu
Better synonyms for enriching biomedical search. J. Am. Medical Informatics Assoc. 27 (12) (2020)
Rachel Bawden, Giorgio Maria Di Nunzio, Cristian Grozea, Inigo Jauregi Unanue, Antonio Jimeno-Yepes, Nancy Mah, David Martínez, Aurélie Névéol, Mariana L. Neves, Maite Oronoz, Olatz Perez-de-Viñaspre, Massimo Piccardi, Roland Roller, Amy Siu, Philippe Thomas, Federica Vezzani, Maika Vicente Navarro, Dina Wiemann, Lana Yeganova
Findings of the WMT 2020 Biomedical Translation Shared Task: Basque, Italian and Russian as New Additional Languages. WMT@EMNLP (2020)
Lana Yeganova, Rezarta Islamaj Dogan, Qingyu Chen, Robert Leaman, Alexis Allot, Chih-Hsuan Wei, Donald C. Comeau, Won Kim, Yifan Peng, W. John Wilbur, Zhiyong Lu
Navigating the landscape of COVID-19 research through literature analysis: A bird's eye view. CoRR (2020)
Rezarta Islamaj Dogan, Lana Yeganova, Won Kim, Natalie Xie, W. John Wilbur
PDC - a probabilistic distributional clustering algorithm: a case study on suicide articles in PubMed. CoRR (2019)
Lana Yeganova, Won Kim, Donald C. Comeau, W. John Wilbur, Zhiyong Lu
A Field Sensor: computing the composition and intent of PubMed queries. Database J. Biol. Databases Curation 2018 (2018)
Won Kim, Lana Yeganova, Donald C. Comeau, W. John Wilbur, Zhiyong Lu
MeSH-based dataset for measuring the relevance of text retrieval. BioNLP (2018)
Lana Yeganova, Sun Kim, Grigory Balasanov, W. John Wilbur
Discovering themes in biomedical literature using a projection-based algorithm. BMC Bioinform. 19 (1) (2018)
Lana Yeganova, Donald C. Comeau, Won Kim, W. John Wilbur, Zhiyong Lu
SingleCite: Towards an improved Single Citation Search in PubMed. BioNLP (2018)
Sun Kim, Lana Yeganova, W. John Wilbur
: searching PubMed abstracts by utilizing MeSH and MeSH-derived topical terms. Bioinform. 32 (19) (2016)
Lana Yeganova, Won Kim, Sun Kim, Rezarta Islamaj Dogan, Wanli Liu, Donald C. Comeau, Zhiyong Lu, W. John Wilbur
PubTermVariants: biomedical term variants and their use for PubMed search. BioNLP@ACL (2016)
Sun Kim, Lana Yeganova, W. John Wilbur
Summarizing Topical Contents from PubMed Documents Using a Thematic Analysis. EMNLP (2015)
Sun Kim, Haibin Liu, Lana Yeganova, W. John Wilbur
Extracting drug-drug interactions from literature using a rich feature-based linear kernel approach. J. Biomed. Informatics 55 (2015)
Rezarta Islamaj Dogan, Donald C. Comeau, Lana Yeganova, W. John Wilbur
Finding abbreviations in biomedical literature: three BioC-compatible modules and four BioC-formatted corpora. Database J. Biol. Databases Curation 2014 (2014)
Lana Yeganova, Won Kim, Sun Kim, W. John Wilbur
Retro: concept-based clustering of biomedical topical sets. Bioinform. 30 (22) (2014)
Wanli Liu, Rezarta Islamaj Dogan, Sun Kim, Donald C. Comeau, Won Kim, Lana Yeganova, Zhiyong Lu, W. John Wilbur
Author name disambiguation for PubMed. J. Assoc. Inf. Sci. Technol. 65 (4) (2014)
Sun Kim, Haibin Liu, Lana Yeganova, W. John Wilbur
Extracting drug-drug interactions from literature using a rich feature-based linear kernel approach. AMIA (2014)
Rezarta Islamaj Dogan, Yolanda Gil, Haym Hirsh, Narayanan Chatapuram Krishnan, Michael Lewis, Çetin Meriçli, Parisa Rashidi, Victor Raskin, Samarth Swarup, Wei Sun, Julia M. Taylor, Lana Yeganova
Reports on the 2012 AAAI Fall Symposium Series. AI Mag. 34 (1) (2013)
Won Kim, Lana Yeganova, Donald C. Comeau, W. John Wilbur
Identifying well-formed biomedical phrases in MEDLINE® text. J. Biomed. Informatics 45 (6) (2012)
Lana Yeganova, Won Kim, Donald C. Comeau, W. John Wilbur
. J. Biomed. Semant. 3 (S-3) (2012)
Rezarta Islamaj Dogan, Lana Yeganova
Topics in machine learning for biomedical literature analysis and text retrieval. J. Biomed. Semant. 3 (S-3) (2012)
Lana Yeganova, Vahan Grigoryan, Won Kim, W. John Wilbur
Automatic Identification of Key Concepts in Large PubMed Retrievals. AAAI Fall Symposium: Information Retrieval and Knowledge Discovery in Biomedical Text (2012)
Lana Yeganova
Organizers. AAAI Fall Symposium: Information Retrieval and Knowledge Discovery in Biomedical Text (2012)
Rezarta Islamaj Dogan, Lana Yeganova
Topics in machine learning for biomedical literature analysis and text retrieval. BMC Bioinform. 12 (S-3) (2011)
Lana Yeganova, Donald C. Comeau, Won Kim, W. John Wilbur
Text Mining Techniques for Leveraging Positively Labeled Data. BioNLP@ACL (2011)
Lana Yeganova, Donald C. Comeau, W. John Wilbur
Machine learning with naturally labeled data for identifying abbreviation definitions. BMC Bioinform. 12 (S-3) (2011)
Lana Yeganova, Won Kim, Donald C. Comeau, W. John Wilbur
Comparison of Two Methods for Finding Biomedical Categories in Medline. ICMLA (2) (2011)
Lana Yeganova, Donald C. Comeau, W. John Wilbur
Identifying Abbreviation Definitions Machine Learning with Naturally Labeled Data. ICMLA (2010)
Lana Yeganova, Donald C. Comeau, Won Kim, W. John Wilbur
How to interpret PubMed queries and why it matters. J. Assoc. Inf. Sci. Technol. 60 (2) (2009)
Lowell Bruce Anderson, Helena Dandurova, James E. Falk, Lana Yeganova
Relationships between Borda voting and Zermelo ranking. Soc. Choice Welf. 32 (3) (2009)
W. John Wilbur, Lana Yeganova, Won Kim
The Synergy Between PAV and AdaBoost. Mach. Learn. 61 (1-3) (2005)
Lana Yeganova, Lawrence H. Smith, W. John Wilbur
Identification of related gene/protein names based on an HMM of name variations. Comput. Biol. Chem. 28 (2) (2004)
Lawrence H. Smith, Lana Yeganova, W. John Wilbur
Hidden Markov models and optimized sequence alignments. Comput. Biol. Chem. 27 (1) (2003)