Kana Shimizu

Publication Activity (10 Years)

Years Active: 2002-2024
Publications (10 Years): 17

Top Topics

Genome Sequences

Differentially Private

Privacy Preserving

Homomorphic Encryption

Top Venues

IEEE ACM Trans. Comput. Biol. Bioinform.

Publications

Shusuke Shirotake, Kana Shimizu
Efficient Privacy Preserving Range Query Using Segment Tree. CISS (2024)
Nozomi Hasegawa, Kana Shimizu
Efficient Colored de Bruijn Graph for Indexing Reads. J. Comput. Biol. 30 (6) (2023)
Mohammad Nabil Ahmed, Kana Shimizu
Private Evaluation of a Decision Tree Based on Secret Sharing. ICISC (2022)
Yoshiki Nakagawa, Satsuya Ohata, Kana Shimizu
Efficient privacy-preserving variable-length substring match for genome sequence. Algorithms Mol. Biol. 17 (1) (2022)
Yoshiki Nakagawa, Satsuya Ohata, Kana Shimizu
Efficient Privacy-Preserving Variable-Length Substring Match for Genome Sequence. WABI (2021)
Mikko A. Heikkilä, Antti Koskela, Kana Shimizu, Samuel Kaski, Antti Honkela
Differentially private cross-silo federated learning. CoRR (2020)
Hiroki Sudo, Masanobu Jimbo, Koji Nuida, Kana Shimizu
Secure Wavelet Matrix: Alphabet-Friendly Privacy-Preserving String Search for Bioinformatics. IEEE ACM Trans. Comput. Biol. Bioinform. 16 (5) (2019)
Hiroki Sudo, Koji Nuida, Kana Shimizu
An Efficient Private Evaluation of a Decision Graph. IACR Cryptol. ePrint Arch. 2019 (2019)
Keren Jiang, Di Zhang, Tsubasa Iino, Risa Kimura, Tatsuo Nakajima, Kana Shimizu, Masahito Ohue, Yutaka Akiyama
A playful tool for predicting protein-protein docking. MUM (2019)
Nuttapong Attrapadung, Goichiro Hanaoka, Shigeo Mitsunari, Yusuke Sakai, Kana Shimizu, Tadanori Teruya
Efficient Two-level Homomorphic Encryption in Prime-order Bilinear Groups and A Fast Implementation in WebAssembly. AsiaCCS (2018)
Hiraku Morita, Nuttapong Attrapadung, Satsuya Ohata, Koji Nuida, Shota Yamada, Kana Shimizu, Goichiro Hanaoka, Kiyoshi Asai
Secure Division Protocol and Applications to Privacy-preserving Chi-squared Tests. ISITA (2018)
Hiroki Sudo, Koji Nuida, Kana Shimizu
An Efficient Private Evaluation of a Decision Graph. ICISC (2018)
Kana Shimizu, Tomohiro Shirai, Yuichi Matsushima, Hiroshi Ishikawa, Katsuyuki Utaka
Simultaneous High-speed and Polarization-Independent Switching Operation of 2x2 Silicon Mach-Zehnder-Type Optical Switch. PSC (2018)
Mikko A. Heikkilä, Eemil Lagerspetz, Samuel Kaski, Kana Shimizu, Sasu Tarkoma, Antti Honkela
Differentially private Bayesian learning on distributed data. NIPS (2017)
Mikko A. Heikkilä, Yusuke Okimoto, Samuel Kaski, Kana Shimizu, Antti Honkela
Differentially Private Bayesian Learning on Distributed Data. CoRR (2017)
Yu Ishimaki, Hiroki Imabayashi, Kana Shimizu, Hayato Yamana
Privacy-preserving string search for genome sequences with FHE bootstrapping optimization. IEEE BigData (2016)
Kana Shimizu, Koji Nuida, Gunnar Rätsch
Efficient privacy-preserving string search and an application in genomics. Bioinform. 32 (11) (2016)
Tadanori Teruya, Koji Nuida, Kana Shimizu, Goichiro Hanaoka
On Limitations and Alternatives of Privacy-Preserving Cryptographic Protocols for Genomic Data. IWSEC (2015)
Kana Shimizu, Koji Nuida, Hiromi Arai, Shigeo Mitsunari, Nuttapong Attrapadung, Michiaki Hamada, Koji Tsuda, Takatsugu Hirokawa, Jun Sakuma, Goichiro Hanaoka, Kiyoshi Asai
Privacy-preserving search for chemical compound databases. BMC Bioinform. 16 (S18) (2015)
Edward Wijaya, Kana Shimizu, Kiyoshi Asai, Michiaki Hamada
Reference-free prediction of rearrangement breakpoint reads. Bioinform. 30 (18) (2014)
Jun-Ichi Ito, Yasuo Tabei, Kana Shimizu, Koji Tsuda, Kentaro Tomii
PoSSuM: a database of similar protein-ligand binding and putative pockets. Nucleic Acids Res. 40 (Database-Issue) (2012)
Chie Motono, Junichi Nakata, Ryotaro Koike, Kana Shimizu, Matsuyuki Shirota, Takayuki Amemiya, Kentaro Tomii, Nozomi Nagano, Naofumi Sakaya, Kiyotaka Misoo, Miwa Sato, Akinori Kidera, Hidekazu Hiroaki, Tsuyoshi Shirai, Kengo Kinoshita, Tamotsu Noguchi, Motonori Ota
SAHG, a comprehensive database of predicted structures of all human proteins. Nucleic Acids Res. 39 (Database-Issue) (2011)
Kana Shimizu, Koji Tsuda
SlideSort: all pairs similarity search for short reads. Bioinform. 27 (4) (2011)
Shuichi Hirose, Kana Shimizu, Tamotsu Noguchi
POODLE-I: Disordered Region Prediction by Integrating POODLE Series and Structural Information Predictors Based on a Workflow Approach. Silico Biol. 10 (3-4) (2010)
Shuichi Hirose, Kana Shimizu, Satoru Kanai, Yutaka Kuroda, Tamotsu Noguchi
POODLE-L: a two-level SVM prediction system for reliably predicting long disordered regions. Bioinform. 23 (16) (2007)
Kana Shimizu, Yoichi Muraoka, Shuichi Hirose, Kentaro Tomii, Tamotsu Noguchi
Predicting mostly disordered proteins by using structure-unknown protein data. BMC Bioinform. 8 (2007)
Kana Shimizu, Shuichi Hirose, Tamotsu Noguchi
POODLE-S: web application for predicting protein disorder by using physicochemical features and reduced amino acid set of a position-specific scoring matrix. Bioinform. 23 (17) (2007)
Kana Shimizu, Jun Adachi, Yoichi Muraoka
Angle: a Sequencing Errors Resistant Program for Predicting Protein Coding Regions in Unfinished Cdna. J. Bioinform. Comput. Biol. 4 (3) (2006)
Kana Shimizu, Yoichi Muraoka, Shuichi Hirose, Tamotsu Noguchi
Feature Selection Based on Physicochemical Properties of Redefined N-term Region and C-term Regions for Predicting Disorder. CIBCB (2005)
Tomonari Sonoda, Toshiya Ikenaga, Kana Shimizu, Yoichi Muraoka
A melody retrieval system on parallelized computers. IWEC (2002)
Tomonari Sonoda, Toshiya Ikenaga, Kana Shimizu, Yoichi Muraoka
The Design Method of a Melody Retrieval System on Parallelized Computers. WEDELMUSIC (2002)