Julie M. Sullivan

Publication Activity (10 Years)

Years Active: 2002-2022
Publications (10 Years): 9

Top Topics

Biological Data

Molecular Interactions

Top Venues

Database J. Biol. Databases Curation

Nucleic Acids Res.

Publications

Rachel Lyne, Adrián Bazaga, Daniela Butano, Sergio Contrino, Joshua Heimbach, Fengyuan Hu, Alex Kalderimis, Mike Lyne, Kevin Herald Reierskog, Radek Stepan, Julie M. Sullivan, Archie Wise, Yo Yehudi, Gos Micklem
HumanMine: advanced data searching, analysis and cross-species comparison. Database J. Biol. Databases Curation 2022 (2022) (2022)
Daniela Butano, Justin Clark-Casey, Sergio Contrino, Joshua Heimbach, Rachel Lyne, Kevin Herald Reierskog, Julie M. Sullivan, Yo Yehudi, Gos Micklem
Implementing FAIR Principles in InterMine. SWAT4HCLS (2019)
Konstantinos A Kyritsis, Bing Wang, Julie M. Sullivan, Rachel Lyne, Gos Micklem
InterMineR: an R package for InterMine databases. Bioinform. 35 (17) (2019)
M. Sivade Dumousseau, Maximilian Koch, Anjali Shrivastava, Diego Alonso-López, Javier De Las Rivas, Noemi del-Toro, Colin W. Combe, Birgit H. M. Meldal, Joshua Heimbach, Juri Rappsilber, Julie M. Sullivan, Yo Yehudi, Sandra E. Orchard
JAMI: a Java library for molecular interactions and data interoperability. BMC Bioinform. 19 (1) (2018)
Daria Komkova, Rachel Lyne, Julie M. Sullivan, Yo Yehudi, Gos Micklem
The InterMine Android app: Cross-organism genomic data in your pocket. F1000Research 7 (2018)
M. Sivade Dumousseau, Diego Alonso-López, Mais G. Ammari, Glyn Bradley, Nancy H. Campbell, Arnaud Céol, Gianni Cesareni, Colin W. Combe, Javier De Las Rivas, Noemi del-Toro, Joshua Heimbach, Henning Hermjakob, Igor Jurisica, Maximilian Koch, Luana Licata, Ruth C. Lovering, David J. Lynn, Birgit H. M. Meldal, Gos Micklem, Simona Panni, Pablo Porras, Sylvie Ricard-Blum, Bernd Roechert, Lukasz Salwínski, Anjali Shrivastava, Julie M. Sullivan, Nicolas Thierry-Mieg, Yo Yehudi, Kim Van Roey, Sandra E. Orchard
Encompassing new use cases - level 3.0 of the HUPO-PSI format for molecular interactions. BMC Bioinform. 19 (1) (2018)
Maxime Déraspe, Gail Binkley, Daniela Butano, Matthew Chadwick, J. Michael Cherry, Justin Clark-Casey, Sergio Contrino, Jacques Corbeil, Joshua Heimbach, Kalpana Karra, Rachel Lyne, Julie M. Sullivan, Yo Yehudi, Gos Micklem, Michel Dumontier
Making Linked Data SPARQL with the InterMine Biological Data Warehouse. SWAT4LS (2016)
David Rhee, Kevin R. Shieh, Julie M. Sullivan, Gos Micklem, Kami Kim, Aaron Golden
Understanding the Systems Biology of Pathogen Virulence Using Semantic Methodologies. ICSC (2016)
Maxime Déraspe, Kalpana Karra, Gail Binkley, Julie M. Sullivan, Gos Micklem, Jacques Corbeil, J. Michael Cherry, Michel Dumontier
Semantic Research Platform for Model Organisms. BMDID@ISWC (2016)
David B. Rhee, Matthew McKnight Croken, Kevin R. Shieh, Julie M. Sullivan, Gos Micklem, Kami Kim, Aaron Golden
systems biology research. Database J. Biol. Databases Curation 2015 (2015)
Vivek Krishnakumar, Matthew R. Hanlon, Sergio Contrino, Erik S. Ferlanti, Svetlana Karamycheva, Maria Kim, Benjamin D. Rosen, Chia-Yi Cheng, Walter Moreira, Stephen A. Mock, Joseph Stubbs, Julie M. Sullivan, Konstantinos Krampis, Jason R. Miller, Gos Micklem, Matthew Vaughn, Christopher D. Town
Araport: the Arabidopsis Information Portal. Nucleic Acids Res. 43 (Database-Issue) (2015)
Alex Kalderimis, Radek Stepan, Julie M. Sullivan, Rachel Lyne, Michael Lyne, Gos Micklem
: A BioJS component for displaying graphical or statistical analysis of collections of items from InterMine endpoints. F1000Research 3 (2014)
Alex Kalderimis, Radek Stepan, Julie M. Sullivan, Rachel Lyne, Michael Lyne, Gos Micklem
: A BioJS component for displaying data from InterMine compatible webservice endpoints. F1000Research 3 (2014)
Alex Kalderimis, Radek Stepan, Julie M. Sullivan, Rachel Lyne, Michael Lyne, Gos Micklem
: A reusable JavaScript component for displaying directed graphs. F1000Research 3 (2014)
Alex Kalderimis, Rachel Lyne, Daniela Butano, Sergio Contrino, Mike Lyne, Joshua Heimbach, Fengyuan Hu, Richard N. Smith, Radek Stepan, Julie M. Sullivan, Gos Micklem
InterMine: extensive web services for modern biology. Nucleic Acids Res. 42 (Webserver-Issue) (2014)
Rama Balakrishnan, Julie Park, Kalpana Karra, Benjamin C. Hitz, Gail Binkley, Eurie L. Hong, Julie M. Sullivan, Gos Micklem, J. Michael Cherry
data as a multipurpose tool-kit. Database J. Biol. Databases Curation 2012 (2012)
Richard N. Smith, Jelena Aleksic, Daniela Butano, Adrian Carr, Sergio Contrino, Fengyuan Hu, Mike Lyne, Rachel Lyne, Alex Kalderimis, Kim Rutherford, Radek Stepan, Julie M. Sullivan, Matthew Wakeling, Xavier Watkins, Gos Micklem
InterMine: a flexible data warehouse system for the integration and analysis of heterogeneous biological data. Bioinform. 28 (23) (2012)
Sergio Contrino, Richard N. Smith, Daniela Butano, Adrian Carr, Fengyuan Hu, Rachel Lyne, Kim Rutherford, Alex Kalderimis, Julie M. Sullivan, Seth Carbon, Ellen T. Kephart, Paul Lloyd, E. O. Stinson, Nicole L. Washington, Marc D. Perry, Peter Ruzanov, Zheng Zha, Suzanna E. Lewis, Lincoln D. Stein, Gos Micklem
modMine: flexible access to modENCODE data. Nucleic Acids Res. 40 (Database-Issue) (2012)
Mark P. McPike, Julie M. Sullivan, Jerry Goodisman, James C. Dabrowiak
Footprinting, circular dichroism and UV melting studies on neomycin B binding to the packaging region of human immunodeficiency virus type-1 RNA. Nucleic Acids Res. 30 (13) (2002)