Sergio Contrino

Publication Activity (10 Years)

Years Active: 1997-2024
Publications (10 Years): 4

Top Topics

Top Venues

Nucleic Acids Res.

Briefings Bioinform.

Database J. Biol. Databases Curation

Publications

Maria A Rujano, Jan-Willem Boiten, Christian Ohmann, Steve Canham, Sergio Contrino, Romain David, Jonathan Ewbank, Claudia Filippone, Claire Connellan, Ilse Custers, Rick van Nuland, Michaela Theresia Mayrhofer, Petr Holub, Eva García Álvarez, Emmanuel Bacry, Nigel Hughes, Mallory A Freeberg, Birgit Schaffhauser, Harald Wagener, Alex Sánchez-Pla, Guido Bertolini, Maria Panagiotopoulou
Sharing sensitive data in life sciences: an overview of centralized and federated approaches. Briefings Bioinform. 25 (4) (2024)
Rachel Lyne, Adrián Bazaga, Daniela Butano, Sergio Contrino, Joshua Heimbach, Fengyuan Hu, Alex Kalderimis, Mike Lyne, Kevin Herald Reierskog, Radek Stepan, Julie M. Sullivan, Archie Wise, Yo Yehudi, Gos Micklem
HumanMine: advanced data searching, analysis and cross-species comparison. Database J. Biol. Databases Curation 2022 (2022) (2022)
Daniela Butano, Justin Clark-Casey, Sergio Contrino, Joshua Heimbach, Rachel Lyne, Kevin Herald Reierskog, Julie M. Sullivan, Yo Yehudi, Gos Micklem
Implementing FAIR Principles in InterMine. SWAT4HCLS (2019)
Maxime Déraspe, Gail Binkley, Daniela Butano, Matthew Chadwick, J. Michael Cherry, Justin Clark-Casey, Sergio Contrino, Jacques Corbeil, Joshua Heimbach, Kalpana Karra, Rachel Lyne, Julie M. Sullivan, Yo Yehudi, Gos Micklem, Michel Dumontier
Making Linked Data SPARQL with the InterMine Biological Data Warehouse. SWAT4LS (2016)
Vivek Krishnakumar, Matthew R. Hanlon, Sergio Contrino, Erik S. Ferlanti, Svetlana Karamycheva, Maria Kim, Benjamin D. Rosen, Chia-Yi Cheng, Walter Moreira, Stephen A. Mock, Joseph Stubbs, Julie M. Sullivan, Konstantinos Krampis, Jason R. Miller, Gos Micklem, Matthew Vaughn, Christopher D. Town
Araport: the Arabidopsis Information Portal. Nucleic Acids Res. 43 (Database-Issue) (2015)
Alex Kalderimis, Rachel Lyne, Daniela Butano, Sergio Contrino, Mike Lyne, Joshua Heimbach, Fengyuan Hu, Richard N. Smith, Radek Stepan, Julie M. Sullivan, Gos Micklem
InterMine: extensive web services for modern biology. Nucleic Acids Res. 42 (Webserver-Issue) (2014)
Richard N. Smith, Jelena Aleksic, Daniela Butano, Adrian Carr, Sergio Contrino, Fengyuan Hu, Mike Lyne, Rachel Lyne, Alex Kalderimis, Kim Rutherford, Radek Stepan, Julie M. Sullivan, Matthew Wakeling, Xavier Watkins, Gos Micklem
InterMine: a flexible data warehouse system for the integration and analysis of heterogeneous biological data. Bioinform. 28 (23) (2012)
Sergio Contrino, Richard N. Smith, Daniela Butano, Adrian Carr, Fengyuan Hu, Rachel Lyne, Kim Rutherford, Alex Kalderimis, Julie M. Sullivan, Seth Carbon, Ellen T. Kephart, Paul Lloyd, E. O. Stinson, Nicole L. Washington, Marc D. Perry, Peter Ruzanov, Zheng Zha, Suzanna E. Lewis, Lincoln D. Stein, Gos Micklem
modMine: flexible access to modENCODE data. Nucleic Acids Res. 40 (Database-Issue) (2012)
Nicole L. Washington, E. O. Stinson, Marc D. Perry, Peter Ruzanov, Sergio Contrino, Richard N. Smith, Zheng Zha, Rachel Lyne, Adrian Carr, Paul Lloyd, Ellen T. Kephart, Sheldon J. McKay, Gos Micklem, Lincoln D. Stein, Suzanna E. Lewis
The modENCODE Data Coordination Center: lessons in harvesting comprehensive experimental details. Database J. Biol. Databases Curation 2011 (2011)
Ugis Sarkans, Helen E. Parkinson, Gonzalo Garcia Lara, Ahmet Oezcimen, Anjan Sharma, Niran Abeygunawardena, Sergio Contrino, Ele Holloway, Philippe Rocca-Serra, Gaurab Mukherjee, Mohammadreza Shojatalab, Misha Kapushesky, Susanna-Assunta Sansone, Anna Farne, Tim F. Rayner, Alvis Brazma
The ArrayExpress gene expression database: a software engineering and implementation perspective. Bioinform. 21 (8) (2005)
Helen E. Parkinson, Ugis Sarkans, Mohammadreza Shojatalab, Niran Abeygunawardena, Sergio Contrino, Richard Coulson, Anna Farne, Gonzalo Garcia Lara, Ele Holloway, Misha Kapushesky, P. Lilja, Gaurab Mukherjee, Ahmet Oezcimen, Tim F. Rayner, Philippe Rocca-Serra, Anjan Sharma, Susanna-Assunta Sansone, Alvis Brazma
ArrayExpress - a public repository for microarray gene expression data at the EBI. Nucleic Acids Res. 33 (Database-Issue) (2005)
Rolf Apweiler, Alain Gateau, Sergio Contrino, Maria Jesus Martin, Vivien Junker, Claire O'Donovan, Fiona Lang, Nicoletta Mitaritonna, Stephanie Kappus, Amos Bairoch
Protein Sequence Annotation in the Genome Era: The Annotation Concept of SWISS-PROT + TREMBL. ISMB (1997)