James C. Costello

Publication Activity (10 Years)

Years Active: 2004-2023
Publications (10 Years): 5

Top Topics

Similar Patterns

Knowledge Intensive

Boolean Functions

Top Venues

Genom. Proteom. Bioinform.

Publications

Gustavo Stolovitzky, Julio Saez-Rodriguez, Julie Bletz, Jacob Albrecht, Gaia Andreoletti, James C. Costello, Paul C. Boutros
AI Competitions and Benchmarks: The life cycle of challenges and benchmarks. CoRR (2023)
Alexandra J. Lee, Dallas L. Mould, Jake Crawford, Dongbo Hu, Rani K. Powers, Georgia Doing, James C. Costello, Deborah A. Hogan, Casey S. Greene
SOPHIE: Generative Neural Networks Separate Common and Specific Transcriptional Responses. Genom. Proteom. Bioinform. 20 (5) (2022)
Rani K. Powers, Andrew Goodspeed, Harrison Pielke-Lombardo, Aik Choon Tan, James C. Costello
GSEA-InContext: identifying novel and common patterns in expression experiments. Bioinform. 34 (13) (2018)
Brian C. Ross, Mayla Boguslav, Holly Weeks, James C. Costello
Simulating heterogeneous populations using Boolean models. BMC Syst. Biol. 12 (1) (2018)
Kimberly R. Kanigel Winner, James C. Costello
A Spatiotemporal Model to Simulate Chemotherapy Regimens for Heterogeneous Bladder Cancer Metastases to the Lung. PSB (2017)
Thomas Cokelaer, Mukesh Bansal, Christopher Bare, Erhan Bilal, Brian M. Bot, Elias Chaibub Neto, Federica Eduati, Mehmet Gönen, Steven M. Hill, Bruce R. Hoff, Jonathan R. Karr, Robert Küffner, Michael P. Menden, Pablo Meyer, Raquel Norel, Abhishek Pratap, Robert J. Prill, Matthew T. Weirauch, James C. Costello, Gustavo Stolovitzky, Julio Saez-Rodriguez
DREAMTools: a Python package for scoring collaborative challenges. F1000Research 4 (2015)
Daniel R. Schrider, James C. Costello, Matthew W. Hahn
All Human-Specific Gene Losses Are Present in the Genome as Pseudogenes. J. Comput. Biol. 16 (10) (2009)
James C. Costello, Daniel R. Schrider, Jeff Gehlhausen, Mehmet M. Dalkilic
Data-Driven Ontologies. Pacific Symposium on Biocomputing (2009)
James C. Costello, Mira V. Han, Matthew W. Hahn
Limitations of Pseudogenes in Identifying Gene Losses. RECOMB-CG (2008)
James C. Costello, Jade E. Buchanan-Carter, Mehmet M. Dalkilic, Justen Andrews
Using Drosophila melanogaster Data to Discover Disease-Related Protein Interactions in Humans. CIBCB (2007)
Mehmet M. Dalkilic, Wyatt T. Clark, James C. Costello, Predrag Radivojac
Using Compression to Identify Classes of Inauthentic Texts. SDM (2006)
Kazuhiro Seki, James C. Costello, Vasanth R. Singan, Javed Mostafa
TREC 2004 Genomics Track Experiments at IUB. TREC (2004)
Arijit Sengupta, Mehmet M. Dalkilic, James C. Costello
Semantic thumbnails: a novel method for summarizing document collections. SIGDOC (2004)