Giuseppe Agapito

Publication Activity (10 Years)

Years Active: 2010-2024
Publications (10 Years): 59

Top Topics

Association Rules

Top Venues

Briefings Bioinform.

Publications

Luca Barillaro, Marianna Milano, Maria Eugenia Caligiuri, Jelle R. Dalenberg, Giuseppe Agapito, Michael Biehl, Mario Cannataro
A Graph-Theory Based fMRI Analysis. ICCS (6) (2024)
Giuseppe Agapito, Gaetano Guardasole, Mario Cannataro
Efficient GPU Processing Method to Analyze Large GWAS Data Sets. PDP (2024)
Gessica Fulciniti, Abdellah Kabli, Mario Cannataro, Gaetano Guardasole, Giuseppe Agapito
Artificial Intelligence to Analyze Huge Amounts of Juridical Documents via Edge Computing. EWSN (2023)
Luca Barillaro, Giuseppe Agapito, Mario Cannataro
Using Edge-based Deep Learning Model for Early Detection of Cancer. PDP (2023)
Luca Barillaro, Giuseppe Agapito, Mario Cannataro
High performance deep learning libraries for biomedical applications. PDP (2023)
Giuseppe Agapito, Mario Cannataro, Pietro Cinaglia, Gaetano Guardasole, Marianna Milano
Use Predictive Learning Model to Tackle Data Breaches in Healthcare Domain. BIBM (2023)
Giuseppe Agapito, Mario Cannataro
An Overview on the Challenges and Limitations Using Cloud Computing in Healthcare Corporations. Big Data Cogn. Comput. 7 (2) (2023)
Luca Barillaro, Giuseppe Agapito, Mario Cannataro
Scalable deep learning for healthcare: methods and applications. BCB (2022)
Giuseppe Agapito, Marianna Milano, Mario Cannataro
A statistical network pre-processing method to improve relevance and significance of gene lists in microarray gene expression studies. BMC Bioinform. (6) (2022)
Davide Chicco, Giuseppe Agapito
Nine quick tips for pathway enrichment analysis. PLoS Comput. Biol. 18 (8) (2022)
Giuseppe Agapito, Chiara Pastrello, Yun Niu, Igor Jurisica
Pathway integration and annotation: building a puzzle with non-matching pieces and no reference picture. Briefings Bioinform. 23 (5) (2022)
Giuseppe Agapito, Mario Cannataro
A parallel software pipeline to select relevant genes for pathway enrichment. PDP (2022)
Griffin M. Weber, Chuan Hong, Zongqi Xia, Nathan P. Palmer, Paul Avillach, Sehi L'Yi, Mark S. Keller, Shawn N. Murphy, Alba Gutiérrez-Sacristán, Clara-Lea Bonzel, Arnaud Serret-Larmande, Antoine Neuraz, Gilbert S. Omenn, Shyam Visweswaran, Jeffrey G. Klann, Andrew M. South, Ne-Hooi Will Loh, Mario Cannataro, Brett K. Beaulieu-Jones, Riccardo Bellazzi, Giuseppe Agapito, Mario Alessiani, Bruce J. Aronow, Douglas S. Bell, Vincent Benoit, Florence T. Bourgeois, Luca Chiovato, Kelly Cho, Arianna Dagliati, Scott L. DuVall, Noelia García-Barrio, David A. Hanauer, Yuk-Lam Ho, John H. Holmes, Richard W. Issitt, Molei Liu, Yuan Luo, Kristine E. Lynch, Sarah Maidlow, Alberto Malovini, Kenneth D. Mandl, Chengsheng Mao, Michael E. Matheny, Jason H. Moore, Jeffrey S. Morris, Michele Morris, Danielle L. Mowery, Kee Yuan Ngiam, Lav P. Patel, Miguel Pedrera-Jiménez, Rachel B. Ramoni, Emily Schriver, Petra Schubert, Pablo Serrano-Balazote, Anastasia Spiridou, Amelia L. M. Tan, Byorn W. L. Tan, Valentina Tibollo, Carlo Torti, Enrico M. Trecarichi, Xuan Wang, James R. Aaron, Adem Albayrak, Giuseppe Albi, Anna Alloni, Danilo F. Amendola, François Angoulvant, Anthony L. L. J. Li, Fatima Ashraf, Andrew Atz, Paul Avillach, Paula S. Azevedo, James Balshi, Brett K. Beaulieu-Jones, Antonio Bellasi, Vincent Benoit, Michele Beraghi, José Luis Bernal-Sobrino, Mélodie Bernaux, Romain Bey, Surbhi Bhatnagar, Alvar Javier Blanco-Martínez, Martin Boeker, John Booth, Silvano Bosari, Robert L. Bradford, Gabriel A. Brat, Stéphane Bréant, Nicholas W. Brown, Raffaele Bruno, William A. Bryant, Mauro Bucalo, Emily Bucholz, Anita Burgun, Tianxi Cai, Aldo Carmona, Charlotte Caucheteux, Julien Champ, Krista Y. Chen, Jin Chen, Lorenzo Chiudinelli, Kelly Cho, James J. Cimino, Tiago K. Colicchio, Sylvie Cormont, Sébastien Cossin, Jean B. Craig, Juan Luis Cruz-Bermúdez, Jaime Cruz-Rojo, Mohamad Daniar, Christel Daniel, Priyam Das, Batsal Devkota, Audrey Dionne, Rui Duan, Julien Dubiel, Loic Esteve, Hossein Estiri, Shirley Fan, Robert W. Follett, Thomas Ganslandt, Noelia García-Barrio, Lana X. Garmire, Nils Gehlenborg, Emily J. Getzen, Alon Geva, Tobias Gradinger, Alexandre Gramfort, Romain Griffier, Nicolas Griffon, Olivier Grisel, Alba Gutiérrez-Sacristán, Larry Han, David A. Hanauer, Christian Haverkamp, Derek Y. Hazard, Bing He, Darren W. Henderson, Martin Hilka, Kenneth M. Huling, Meghan R. Hutch, Richard W. Issitt, Anne-Sophie Jannot, Vianney Jouhet, Ramakanth Kavuluru, Chris J. Kennedy, Kate F. Kernan, Daniel A. Key, Katie Kirchoff, Jeffrey G. Klann, Isaac S. Kohane, Ian D. Krantz, Detlef Kraska, Ashok K. Krishnamurthy, Trang T. Le, Judith Leblanc, Guillaume Lemaitre, Leslie Lenert, Damien Leprovost, Molei Liu, Qi Long, Sara Lozano-Zahonero, Sadiqa Mahmood, Sarah Maidlow, Adeline Makoudjou, Anupama Maram, Patricia Martel, Marcelo R. Martins, Jayson S. Marwaha, Aaron J. Masino, Maria Mazzitelli, Arthur Mensch, Marianna Milano, Marcos F. Minicucci, Bertrand Moal, Taha Mohseni Ahooyi, Jason H. Moore, Cinta Moraleda, Jeffrey S. Morris, Karyn L. Moshal, Sajad Mousavi, Douglas A. Murad, Shawn N. Murphy, Thomas Naughton, Carlos Tadeu Breda Neto, Jane Newburger, Kee Yuan Ngiam, Wanjiku F. M. Njoroge, James B. Norman, Jihad Obeid, Marina P. Okoshi, Karen L. Olson, Gilbert S. Omenn, Nina Orlova, Brian Ostasiewski, Nathan P. Palmer, Nicolas Paris, Lav P. Patel, Miguel Pedrera-Jiménez, Ashley C. Pfaff, Emily R. Pfaff, Danielle Pillion, Sara Pizzimenti, Hans-Ulrich Prokosch, Robson A. Prudente, Andrea Prunotto, Víctor Quirós-González, Rachel B. Ramoni, Maryna Raskin, Siegbert Rieg, Gustavo Roig-Domínguez, Pablo Rojo, Paula Rubio-Mayo, Paolo Sacchi, Carlos Sáez, Elisa Salamanca, Malarkodi Jebathilagam Samayamuthu, L. Nelson Sanchez-Pinto, Arnaud Sandrin, Nandhini Santhanam, Janaina C. C. Santos, Fernando J. Sanz Vidorreta, Maria Savino, Jürgen Schüttler, Luigia Scudeller, Neil J. Sebire, Pablo Serrano-Balazote, Patricia Serre, Arnaud Serret-Larmande, Mohsin Shah, Zahra Shakeri Hossein Abad, Domenick Silvio, Piotr Sliz, Jiyeon Son, Charles Sonday, Andrew M. South, Francesca Sperotto, Zachary H. Strasser, Amelia L. M. Tan, Bryce W. Q. Tan, Suzana E. Tanni, Deanne M. Taylor, Ana I. Terriza-Torres, Patric Tippmann, Emma M. S. Toh, Yi-Ju Tseng, Andrew K. Vallejos, Gaël Varoquaux, Margaret E. Vella, Guillaume Verdy, Jill-Jênn Vie, Shyam Visweswaran, Michele Vitacca, Kavishwar B. Wagholikar, Lemuel R. Waitman, Demian Wassermann, Griffin M. Weber, Martin Wolkewitz, Scott Wong, Zongqi Xia, Xin Xiong, Ye Ye, Nadir Yehya, William Yuan, Alberto Zambelli, Harrison G. Zhang, Daniela Zöller, Valentina Zuccaro, Chiara Zucco, Isaac S. Kohane, Tianxi Cai, Gabriel A. Brat
International comparisons of laboratory values from the 4CE collaborative to predict COVID-19 mortality. npj Digit. Medicine 5 (2022)
Luca Barillaro, Giuseppe Agapito, Mario Cannataro
Edge-based Deep Learning in Medicine: Classification of ECG signals. BIBM (2022)
Giuseppe Agapito, Marianna Milano, Mario Cannataro
Parallel Network Analysis and Communities Detection (PANC) Pipeline for the Analysis and Visualization of COVID-19 Data. Parallel Process. Lett. 32 (1&2) (2022)
Giuseppe Agapito, Pietro Hiram Guzzi, Mario Cannataro
Parallel and distributed association rule mining in life science: A novel parallel algorithm to mine genomics data. Inf. Sci. 575 (2021)
Giuseppe Agapito, Mario Cannataro
Using BioPAX-Parser (BiP) to enrich lists of genes or proteins with pathway data. BMC Bioinform. (13) (2021)
Marzia Settino, Mariamena Arbitrio, Francesca Scionti, Daniele Caracciolo, Giuseppe Agapito, Pierfrancesco Tassone, Pierosandro Tagliaferri, Maria Teresa Di Martino, Mario Cannataro
Identifying prognostic markers for multiple myeloma through integration and analysis of MMRF-CoMMpass data. J. Comput. Sci. 51 (2021)
Giuseppe Agapito, Mario Cannataro
snpStorage: a database to store and share experimental SNPs data sets. SEBD (2021)
Giuseppe Agapito, Chiara Pastrello, Igor Jurisica
Comprehensive pathway enrichment analysis workflows: COVID-19 case study. Briefings Bioinform. 22 (2) (2021)
Chiara Zucco, Barbara Calabrese, Giuseppe Agapito, Pietro Hiram Guzzi, Mario Cannataro
Sentiment analysis for mining texts and social networks data: Methods and tools. WIREs Data Mining Knowl. Discov. 10 (1) (2020)
Giuseppe Agapito, Pietro Hiram Guzzi, Mario Cannataro
An efficient and scalable SPARK preprocessing methodology for Genome Wide Association Studies. PDP (2020)
Giuseppe Agapito, Chiara Pastrello, Pietro Hiram Guzzi, Igor Jurisica, Mario Cannataro
BioPAX-Parser: parsing and enrichment analysis of BioPAX pathways. Bioinform. 36 (15) (2020)
Giuseppe Agapito, Mario Cannataro
cPEA: a parallel method to perform pathway enrichment analysis using multiple pathways databases. Soft Comput. 24 (23) (2020)
Giuseppe Agapito, Mario Cannataro
Using BioPAX-Parser (BiP) to Annotate Lists of Biological Entities with Pathway Data. ER (Workshops) (2020)
Giuseppe Agapito, Marianna Milano, Mario Cannataro
A New Parallel Methodology for the Network Analysis of COVID-19 Data. Euro-Par Workshops (2020)
Giuseppe Agapito, Barbara Calabrese, Pietro Hiram Guzzi, Mario Cannataro
A pipeline for mining association rules from large datasets of retailers invoices. APPIS (2019)
Marzia Settino, Anna Bernasconi, Gaia Ceddia, Giuseppe Agapito, Marco Masseroli, Mario Cannataro
Using GMQL-Web for Querying, Downloading and Integrating Public with Private Genomic Datasets. BCB (2019)
Giuseppe Agapito, Barbara Calabrese, Pietro Hiram Guzzi, Sabrina Graziano, Mario Cannataro
Association Rule Mining from large datasets of clinical invoices document. BIBM (2019)
Rodrigo Crespo-Cepeda, Giuseppe Agapito, José Luis Vázquez-Poletti, Mario Cannataro
Challenges and Opportunities of Amazon Serverless Lambda Services in Bioinformatics. BCB (2019)
Giuseppe Agapito
Parallel and Distributed Computing Methodologies in Bioinformatics. IDCS (2019)
Giuseppe Agapito, Wes Lloyd, Mario Cannataro
ParBio'19 - 8th Workshop on Parallel and Cloud-based Bioinformatics and Biomedicine. BCB (2019)
Giuseppe Agapito, Mario Cannataro, Pietro Hiram Guzzi, Marianna Milano
Parallel Learning of Weighted Association Rules in Human Phenotype Ontology. Euro-Par Workshops (2019)
Giuseppe Agapito, Mario Cannataro, Pietro H. Guzzi, Marianna Milano
Learning Weighted Association Rules in Human Phenotype Ontology. CIBB (2019)
Giuseppe Agapito, Marianna Milano, Pietro Hiram Guzzi, Mario Cannataro
Mining Association Rules From Disease Ontology. BIBM (2019)
Giuseppe Agapito, Pietro Hiram Guzzi, Mario Cannataro
Pathway Analysis for SNP microarray data. BIBM (2019)
Giuseppe Agapito, Pietro Hiram Guzzi, Mario Cannataro
Parallel extraction of association rules from genomics data. Appl. Math. Comput. 350 (2019)
Giuseppe Agapito, Mario Cannataro
A Parallel Software Platform for Pathway Enrichment. NUMTA(1) (2019)
Giuseppe Agapito, Mariadelina Simeoni, Barbara Calabrese, Ilaria Care, Theodora Lamprinoudi, Pietro Hiram Guzzi, Arturo Pujia, Giorgio Fuiano, Mario Cannataro
DIETOS: A dietary recommender system for chronic diseases monitoring and management. Comput. Methods Programs Biomed. 153 (2018)
Giuseppe Agapito, Mario Cannataro
Services4SNPs: A RESTful Platform for Association Rule Mining and Survival Analysis of Genotyping Data. BCB (2018)
Giuseppe Agapito, Pietro Hiram Guzzi, Mario Cannataro
S4S: RESTful Services to Collect, Integrate and Analyze SNPs and Clinical Data on the Web. BIBM (2018)
Giuseppe Agapito, Mario Cannataro, Mauro Castelli, Riccardo Dondi, Italo Zoppis
Editorial of the Special Issue of the 10th Workshop on Biomedical and Bioinformatics Challenges for Computer Science - BBC 2017. Comput. 7 (1) (2018)
Marianna Milano, Giuseppe Agapito, Pietro Hiram Guzzi, Mario Cannataro
An experimental study of information content measurement of gene ontology terms. Int. J. Mach. Learn. Cybern. 9 (3) (2018)
Giuseppe Agapito, Wes Lloyd
ACM-BCB 2018 ParBio Chairs' Welcome & Organization. BCB (2018)
Giuseppe Agapito, Pietro Hiram Guzzi, Mario Cannataro
Using GenotypeAnalytics to Analyze Pharmacogenomic Datasets. BCB (2017)
Giuseppe Agapito, Mario Cannataro
A software pipeline for multiple microarray data analysis. BIBM (2017)
Giuseppe Agapito, Barbara Calabrese, Pietro Hiram Guzzi, Gionata Fragomeni, Giuseppe Tradigo, Pierangelo Veltri, Mario Cannataro
Parallel and Cloud-Based Analysis of Omics Data: Modelling and Simulation in Medicine. PDP (2017)
Giuseppe Agapito, Pietro Hiram Guzzi, Mario Cannataro
Parallel and Distributed Analysis of Microarray Data. TopHPC (2017)
Giuseppe Agapito, Mario Cannataro, Mauro Castelli, Riccardo Dondi, Italo Zoppis
Workshop on Biomedical and Bioinformatics Challenges for Computer Science - BBC2017. ICCS (2017)
Giuseppe Agapito, Pietro Hiram Guzzi, Mario Cannataro
High Performance Analysis of Omics Data: Experiences at University Magna Graecia of Catanzaro. HPCS (2017)
Giuseppe Agapito, Mariadelina Simeoni, Barbara Calabrese, Pietro Hiram Guzzi, Giorgio Fuiano, Mario Cannataro
DIETOS: A Recommender System for Health Profiling and Diet Management in Chronic Diseases. HealthRecSys@RecSys (2017)
Giuseppe Agapito, Pietro Hiram Guzzi, Mario Cannataro
GenotypeAnalytics: a RESTFul platform to mine multiple associations between SNPs and drug response in case-control studies. PeerJ Prepr. 5 (2017)
Pietro Hiram Guzzi, Giuseppe Agapito, Marianna Milano, Mario Cannataro
Learning Weighted Association Rules in Human Phenotype Ontology. CoRR (2017)
Giuseppe Agapito, Pietro Hiram Guzzi, Mario Cannataro
Learning Association Rules for Pharmacogenomic Studies. NFMCP@PKDD/ECML (2017)
Giuseppe Agapito, Marianna Milano, Pietro Hiram Guzzi, Mario Cannataro
Extracting Cross-Ontology Weighted Association Rules from Gene Ontology Annotations. IEEE ACM Trans. Comput. Biol. Bioinform. 13 (2) (2016)
Pietro Hiram Guzzi, Giuseppe Agapito, Marianna Milano, Mario Cannataro
Methodologies and experimental platforms for generating and analysing microarray and mass spectrometry-based omics data to support P4 medicine. Briefings Bioinform. 17 (4) (2016)
F. Ciullo, Chiara Zucco, Barbara Calabrese, Giuseppe Agapito, Pietro Hiram Guzzi, Mario Cannataro
Computational challenges for sentiment analysis in life sciences. HPCS (2016)
Giuseppe Agapito, Barbara Calabrese, Pietro Hiram Guzzi, Mario Cannataro, Mariadelina Simeoni, Ilaria Care, Theodora Lamprinoudi, Giorgio Fuiano, Arturo Pujia
DIETOS: A recommender system for adaptive diet monitoring and personalized food suggestion. WiMob (2016)
Giuseppe Agapito, Pietro Hiram Guzzi, Mario Cannataro
Efficient Data Mining Analysis of Genomics and Clinical Data for Pharmacogenomics Applications. WILF (2016)
Giuseppe Agapito, Pietro Hiram Guzzi, Mario Cannataro
DMET-Miner: Efficient discovery of association rules from pharmacogenomic data. J. Biomed. Informatics 56 (2015)
Giuseppe Agapito, Marianna Milano, Pietro Hiram Guzzi, Mario Cannataro
Efficient learning of association rules from human phenotype ontology. BCB (2015)
Giuseppe Agapito, Pietro Hiram Guzzi, C. Botta, Mariamena Arbitrio, Pierfrancesco Tassone, Pierosandro Tagliaferri, Mario Cannataro
Overall Survival Analyzer: A software tool to analyze genotyping and clinical data enriched with temporal events. BIBM (2015)
Giuseppe Agapito, Mario Cannataro, Pietro Hiram Guzzi, Marianna Milano
Using GO-WAR for mining cross-ontology weighted association rules. Comput. Methods Programs Biomed. 120 (2) (2015)
Giuseppe Agapito, Mario Cannataro, Pietro Hiram Guzzi, Marianna Milano
GO-WAR: A Tool for Mining Weighted Association Rules from Gene Ontology Annotations. CIBB (2014)
Marianna Milano, Giuseppe Agapito, Pietro Hiram Guzzi, Mario Cannataro
Biases in information content measurement of gene ontology terms. BIBM (2014)
Pietro Hiram Guzzi, Giuseppe Agapito, Maria Teresa Di Martino, Mariamena Arbitrio, Pierfrancesco Tassone, Pierosandro Tagliaferri, Mario Cannataro
DMET-miner: Efficient learning of association rules from genotyping data for personalized medicine. BIBM (2014)
Giuseppe Agapito, Barbara Calabrese, Ilaria Care, Daniela Falcone, Pietro Hiram Guzzi, Nicola Ielpo, Theodora Lamprinoudi, Marianna Milano, Mariadelina Simeoni, Mario Cannataro
Profiling basic health information of tourists: towards a recommendation system for the adaptive delivery of medical certified nutrition contents. HPCS (2014)
Pietro Hiram Guzzi, Giuseppe Agapito, Mario Cannataro
coreSNP: Parallel Processing of Microarray Data. IEEE Trans. Computers 63 (12) (2014)
Giuseppe Agapito, Marianna Milano, Pietro Hiram Guzzi, Mario Cannataro
Improving annotation quality in gene ontology by mining cross-ontology weighted association rules. BIBM (2014)
Giuseppe Agapito, Mario Cannataro, Pietro Hiram Guzzi, Fabrizio Marozzo, Domenico Talia, Paolo Trunfio
Cloud4SNP: Distributed Analysis of SNP Microarray Data on the Cloud. BCB (2013)
Chiara Pastrello, David Otasek, Kristen Fortney, Giuseppe Agapito, Mario Cannataro, Elize Shirdel, Igor Jurisica
Visual Data Mining of Biological Networks: One Size Does Not Fit All. PLoS Comput. Biol. 9 (1) (2013)
Giuseppe Agapito, Pietro Hiram Guzzi, Mario Cannataro
Visualization of protein interaction networks: problems and solutions. BMC Bioinform. 14 (S-1) (2013)
Pietro Hiram Guzzi, Giuseppe Agapito, Maria Teresa Di Martino, Mariamena Arbitrio, Pierfrancesco Tassone, Pierosandro Tagliaferri, Mario Cannataro
DMET-Analyzer: automatic analysis of Affymetrix DMET Data. BMC Bioinform. 13 (2012)
Sergio Greco, Francesco Gullo, Giovanni Ponti, Andrea Tagarelli, Giuseppe Agapito
Clustering XML Documents: a Distributed Collaborative Approach (Extended Abstract). SEBD (2010)