Doheon Lee

ORCID

Publication Activity (10 Years)

Years Active: 1993-2024
Publications (10 Years): 37

Top Venues

Publications

Seunghyun Wang, Doheon Lee
Community cohesion looseness in gene networks reveals individualized drug targets and resistance. Briefings Bioinform. 25 (3) (2024)
Gwangmin Kim, Doheon Lee
Reverse tracking from drug-induced transcriptomes through multilayer molecular networks reveals hidden drug targets. Comput. Biol. Medicine 158 (2023)
Seunghyun Wang, Doheon Lee
Identifying prognostic subgroups of luminal-A breast cancer using deep autoencoders and gene expressions. PLoS Comput. Biol. 19 (5) (2023)
Jaesub Park, Sangyeon Lee, Kwansoo Kim, Jaegyun Jung, Doheon Lee
Large-scale prediction of adverse drug reactions-related proteins with network embedding. Bioinform. 39 (1) (2023)
Ohhyeon Kwon, Maree J. Webster, Sanghyeon Kim, Doheon Lee
SNEP-DB: An integrated database to associate genomic and pathological aspects of psychiatric disorders. BIBM (2022)
Sang-In Bae, Sangyeon Lee, Jae-Myeong Kwon, Hyun-Kyung Kim, Kyung-Won Jang, Doheon Lee, Ki-Hun Jeong
Machine-Learned Light-Field Camera that Reads Facial Expression from High-Contrast and Illumination Invariant 3D Facial Images. Adv. Intell. Syst. 4 (4) (2022)
Kwangmin Kim, Doheon Lee
Context-aware multi-token concept recognition of biological entities. BMC Bioinform. (11) (2021)
Junseok Park, Seongkuk Park, Gwangmin Kim, Kwangmin Kim, Jaegyun Jung, Sunyong Yoo, Gwan-Su Yi, Doheon Lee
Reliable Data Collection in Participatory Trials to Assess Digital Healthcare Applications. IEEE Access 8 (2020)
Doheon Lee
Accelerating Drug Discovery with an AI-Based Virtual Human System CODA. BIBM (2020)
Seunghyun Wang, Doheon Lee
Identifying prognostic subgroups of luminal-A breast cancer using a deep autoencoder. BIBM (2020)
Jaehyun Lee, Doheon Lee, Kwang Hyung Lee
Literature mining for context-specific molecular relations using multimodal representations (COMMODAR). BMC Bioinform. (5) (2020)
Junseok Park, Kwangmin Kim, Woochang Hwang, Doheon Lee
Concept embedding to measure semantic relatedness for biomedical information ontologies. J. Biomed. Informatics 94 (2019)
Jinmyung Jung, Yeeok Kang, Hyojung Paik, Mijin Kwon, Hasun Yu, Doheon Lee
Deconvoluting essential gene signatures for cancer growth from genomic expression in compound-treated cells. Bioinform. 35 (7) (2019)
Sangyeon Lee, Doheon Lee
Visualizing multifunctional PPI network with Gene Ontology annotation. BIBM (2019)
Inkyu An, Doheon Lee, Jung-Woo Choi, Dinesh Manocha, Sung-Eui Yoon
Diffraction-Aware Sound Localization for a Non-Line-of-Sight Source. ICRA (2019)
Mijin Kwon, Soorin Yim, Gwangmin Kim, Saehwan Lee, Chungsun Jeong, Doheon Lee
CODA-ML: context-specific biological knowledge representation for systemic physiology analysis. BMC Bioinform. (10) (2019)
Inkyu An, Doheon Lee, Byeongho Jo, Jung-Woo Choi, Sung-Eui Yoon
Robust Sound Source Localization considering Similarity of Back-Propagation Signals. CoRR (2019)
Hyojung Paik, Ruibin Xi, Doheon Lee
DTMBIO 2019: The Thirteenth International Workshop on Data and Text Mining in Biomedical Informatics. CIKM (2019)
Inkyu An, Doheon Lee, Jung-Woo Choi, Dinesh Manocha, Sung-Eui Yoon
Diffraction-Aware Sound Localization for a Non-Line-of-Sight Source. CoRR (2018)
Moonshik Shin, Donjin Jang, Hojung Nam, Kwang Hyung Lee, Doheon Lee
Predicting the Absorption Potential of Chemical Compounds Through a Deep Learning Approach. IEEE ACM Trans. Comput. Biol. Bioinform. 15 (2) (2018)
Doheon Lee
CONET: a virtual human system-centered platform for drug discovery. Frontiers Comput. Sci. 12 (1) (2018)
Yousang Jo, Sanghyeon Kim, Doheon Lee
Identification of common coexpression modules based on quantitative network comparison. BMC Bioinform. (8) (2018)
Junseok Park, Seongkuk Park, Kwangmin Kim, Doheon Lee
CORUS: Blockchain-Based Trustworthy Evaluation System for Efficacy of Healthcare Remedies. CloudCom (2018)
Kyungrin Noh, Sunyong Yoo, Doheon Lee
A systematic approach to identify therapeutic effects of natural products based on human metabolite information. BMC Bioinform. (8) (2018)
Jinmyung Jung, Mijin Kwon, Sunghwa Bae, Soorin Yim, Doheon Lee
Petri net-based prediction of therapeutic targets that recover abnormally phosphorylated proteins in muscle atrophy. BMC Syst. Biol. 12 (1) (2018)
Sunyong Yoo, Suhyun Ha, Moonshik Shin, Kyungrin Noh, Hojung Nam, Doheon Lee
A Data-Driven Approach for Identifying Medicinal Combinations of Natural Products. IEEE Access 6 (2018)
Soorin Yim, Hasun Yu, Dongjin Jang, Doheon Lee
Annotating activation/inhibition relationships to protein-protein interactions using gene ontology relations. BMC Syst. Biol. 12 (1) (2018)
Seongjoo Moon, Moran Min, Jangwoo Nam, Jaeyou Park, Doheon Lee, Daeyoung Kim
Drowsy Driving Warning System Based on GS1 Standards with Machine Learning. BigData Congress (2017)
Carlos A. Coello Coello, Vincenzo Cutello, Doheon Lee, Mario Pavone
Recent advances in immunological inspired computation. Eng. Appl. Artif. Intell. 62 (2017)
Kiseong Kim, Sangyeon Lee, Doheon Lee, Kwang Hyung Lee
Coupling effects on turning points of infectious diseases epidemics in scale-free networks. BMC Bioinform. 18 (7) (2017)
Sangwoo Kim, Jake Y. Chen, Vincenzo Cutello, Doheon Lee
DTMBIO 2016: The Tenth International Workshop on Data and Text Mining in Biomedical Informatics. CIKM (2016)
Jongsoo Keum, Sunyong Yoo, Doheon Lee, Hojung Nam
Prediction of compound-target interactions of natural products using large-scale drug and protein information. BMC Bioinform. 17 (S-6) (2016)
Woochang Hwang, Jaejoon Choi, Mijin Kwon, Doheon Lee
Context-specific functional module based drug efficacy prediction. BMC Bioinform. 17 (S-6) (2016)
Wonjun Choi, Baeksoo Kim, Hyejin Cho, Doheon Lee, Hyunju Lee
A corpus for plant-chemical relationships in the biomedical domain. BMC Bioinform. 17 (2016)
Junseok Park, Gwangmin Kim, Dongjin Jang, Sungji Choo, Sunghwa Bae, Doheon Lee
A bioinformatics system for searching Co-Occurrence based on Co-Operational Formation with Advanced Method (COCOFAM). CoRR (2016)
Dongjin Jang, Sejoon Lee, Jaehyun Lee, Kiseong Kim, Doheon Lee
Inferring new drug indications using the complementarity between clinical disease signatures and drug effects. J. Biomed. Informatics 59 (2016)
Hasun Yu, Sungji Choo, Junseok Park, Jinmyung Jung, Yeeok Kang, Doheon Lee
Prediction of drugs having opposite effects on disease genes in a directed network. BMC Syst. Biol. 10 (S-1) (2016)
Moonshik Shin, Sungyoung Yoo, Suhyun Ha, Kyungrin Noh, Doheon Lee
Identifying Potential Bioactive Compounds of Natural Products by Combining ADMET Prediction Methods. DTMBIO@CIKM (2015)
Min Song, Doheon Lee, Karin Verspoor
DTMBIO 2015: International Workshop on Data and Text Mining in Biomedical Informatics. CIKM (2015)
Junho Kim, Sanghyeon Kim, Hojung Nam, Sangwoo Kim, Doheon Lee
SoloDel: a probabilistic model for detecting low-frequent somatic deletions from unmatched sequencing data. Bioinform. 31 (19) (2015)
Woochang Hwang, Jaejoon Choi, Mijin Kwon, Doheon Lee
Cell line specific method based on functional modules for drug sensitivity prediction. DTMBIO@CIKM (2015)
Seyeol Yoon, Jinmyung Jung, Hasun Yu, Mijin Kwon, Sungji Choo, Kyunghyun Park, Dongjin Jang, Sangwoo Kim, Doheon Lee
Context-based resolution of semantic conflicts in biological pathways. BMC Medical Informatics Decis. Mak. 15 (S-1) (2015)
Hasun Yu, Jinmyung Jung, Seyeol Yoon, Mijin Kwon, Yeeok Kang, Sunghwa Bae, Doheon Lee
Development of a Framework for Constructing a Virtual Physiological Human with the Integration of COntext Specific Directed Associations (CODA). DTMBIO@CIKM (2015)
Dongjin Jang, Jaehyun Lee, Kwangmin Kim, Doheon Lee
Building Text-mining Framework for Gene-Phenotype Relation Extraction using Deep Leaning. DTMBIO@CIKM (2015)
Jongan Lee, Younghoon Kim, Yong Jeong, Duk L. Na, Jong-Won Kim, Kwang Hyung Lee, Doheon Lee
Inference of brain pathway activities for Alzheimer's disease classification. BMC Medical Informatics Decis. Mak. 15 (S-1) (2015)
Hasun Yu, Jinmyung Jung, Doheon Lee, Sangwoo Kim
What-if Analysis in Biomedical Networks based on Production Rule System. DTMBIO@CIKM (2015)
Junseok Park, Sungji Choo, Doheon Lee
Citizen Organization System for Advanced MEDical research (COSAMED). DTMBIO@CIKM (2015)
Jongan Lee, Younghoon Kim, Yong Jeong, Duk L. Na, Jong-Won Kim, Kwang Hyung Lee, Doheon Lee
Discriminatory Analysis of Alzheimer's Disease through pathway Activity inference in the Resting-State brain. DTMBIO@CIKM (2014)
Kwangmin Kim, Sejoon Lee, Kyunghyun Park, Dongjin Jang, Doheon Lee
Mining Context-Specific Rules from the Literature for Virtual Human Model Simulation. DTMBIO@CIKM (2014)
Seyeol Yoon, Jinmyung Jung, Hasun Yu, Mijin Kwon, Sungji Choo, Kyunghyun Park, Dongjin Jang, Sangwoo Kim, Doheon Lee
Systematic Identification of Context-dependent Conflicting Information in Biological Pathways. DTMBIO@CIKM (2014)
Jinmyung Jung, Hasun Yu, Seyeol Yoon, Mijin Kwon, Sungji Choo, Sangwoo Kim, Doheon Lee
Construction of Multi-level Networks Incorporating Molecule, Cell, Organ and Phenotype Properties for Drug-induced Phenotype Prediction. DTMBIO@CIKM (2014)
Jaesub Park, Jaeho Kim, Junseok Park, Sunghwa Bae, Hyungseok Kim, Doheon Lee
Visualization of Zoomable Network for Multi-Compounds and Multi-Targets Analysis. DTMBIO@CIKM (2014)
Suhyun Ha, Sunyong Yoo, Moonshik Shin, Jin Sook Kwak, Oran Kwon, Min Chang Choi, Keon Wook Kang, Hojung Nam, Doheon Lee
Integrative Database for Exploring Compound Combinations of Natural Products for Medical Effects. DTMBIO@CIKM (2014)
Yousang Jo, Doheon Lee, Kwang H. Lee
Context-specific biological network construction. SCIS&ISIS (2014)
Luonan Chen, Doheon Lee, Hua Xu, Min Song
DTMBIO 2014: International Workshop on Data and Text Mining in Biomedical Informatics. CIKM (2014)
Woochang Hwang, Jaejoon Choi, Jinmyung Jung, Doheon Lee
BSML: bio-synergy modeling language for multi-component and multi-target analysis. DTMBIO (2013)
Jinmyung Jung, Doheon Lee
Inferring disease association using clinical factors in a combinatorial manner and their use in drug repositioning. Bioinform. 29 (16) (2013)
Sam Ferguson, Emery Schubert, Doheon Lee, Densil Cabrera, Gary E. McPherson
A comparison between continuous categorical emotion responses and Stimulus loudness parameters. IISA (2013)
Woochang Hwang, Yongdeuk Hwang, Sunjae Lee, Doheon Lee
Rule-based multi-scale simulation for drug effect pathway analysis. BMC Medical Informatics Decis. Mak. 13 (S-1) (2013)
Jongan Lee, Younghoon Kim, Yong Jeong, Duk L. Na, Kwang Hyung Lee, Doheon Lee
Pathway-based classification of brain activities for alzheimer's disease analysis. DTMBIO (2013)
Atul J. Butte, Doheon Lee, Hua Xu, Min Song
DTMBIO 2013: international workshop on data and text mining in biomedical informatics. CIKM (2013)
Jaejoon Choi, Kwangmin Kim, Min Song, Doheon Lee
Generation and application of drug indication inference models using typed network motif comparison analysis. BMC Medical Informatics Decis. Mak. 13 (S-1) (2013)
Min Song, Doheon Lee, Hua Xu, Sophia Ananiadou
DTMBIO 2012: international workshop on data and text mining in biomedical informatics. CIKM (2012)
Jaejoon Choi, Kwangmin Kim, Min Song, Doheon Lee
TNMCA: generation and application of network motif based inference models for drug repositioning. DTMBIO@CIKM (2012)
Moonshik Shin, Sunyong Yoo, Kwang Hyung Lee, Doheon Lee
Electronic Medical Records privacy preservation through k-anonymity clustering method. SCIS&ISIS (2012)
Woochang Hwang, Yongdeuk Hwang, Sunjae Lee, Doheon Lee
Rule-based whole body modeling for analyzing multi-compound effects. DTMBIO@CIKM (2012)
Doheon Lee
Session details: Keynote address. DTMBIO@CIKM (2012)
Sejoon Lee, Jaejoon Choi, Kyunghyun Park, Min Song, Doheon Lee
Discovering context-specific relationships from biological literature by using multi-level context terms. BMC Medical Informatics Decis. Mak. 12 (S-1) (2012)
Sophia Ananiadou, Doheon Lee, Shamkant B. Navathe, Min Song
DTMBIO 2011: international workshop on data and textmining in biomedical informatics. CIKM (2011)
Sangwoo Kim, Hojung Nam, Doheon Lee
Exploring molecular links between lymph node invasion and cancer prognosis in human breast cancer. BMC Syst. Biol. 5 (S-2) (2011)
Sejoon Lee, Kwang H. Lee, Min Song, Doheon Lee
Building the process-drug-side effect network to discover the relationship between biological Processes and side effects. BMC Bioinform. 12 (S-2) (2011)
Sohyun Hwang, Sangwoo Kim, Heesung Shin, Doheon Lee
Context-dependent transcriptional regulations between signal transduction pathways. BMC Bioinform. 12 (2011)
Sejoon Lee, Eunjung Lee, Kwang H. Lee, Doheon Lee
Predicting disease phenotypes based on the molecular networks with Condition-Responsive Correlation. Int. J. Data Min. Bioinform. 5 (2) (2011)
Young-Kyu Park, Ok Bang, Min-Ho Cha, Jaeheup Kim, John W. Cole, Doheon Lee, Young Kim
SigCS base: an integrated genetic information resource for human cerebral stroke. BMC Syst. Biol. 5 (S-2) (2011)
Younghoon Kim, Imhoi Koo, Byung Hwa Jung, Bong Chul Chung, Doheon Lee
Multivariate classification of urine metabolome profiles for breast cancer diagnosis. BMC Bioinform. 11 (S-2) (2010)
Hyojin Kang, Eunkyoo Oh, Giltsu Choi, Doheon Lee
Genome-wide DNA-binding specificity of PIL5, an Arabidopsis basic Helix-Loop-Helix (bHLH) transcription factor. Int. J. Data Min. Bioinform. 4 (5) (2010)
Ali Zeeshan Ijaz, Min Song, Doheon Lee
MKEM: a Multi-level Knowledge Emergence Model for mining undiscovered public knowledge. BMC Bioinform. 11 (S-2) (2010)
Junho Kim, Doheon Lee
A new perspective of integrative genome-wide association analysis considering trans eSNP effect. BIBM (2010)
Inho Park, Kwang H. Lee, Doheon Lee
Inference of combinatorial Boolean rules of synergistic gene sets from cancer microarray datasets. Bioinform. 26 (12) (2010)
Dokyun Na, Sunjae Lee, Doheon Lee
Mathematical modeling of translation initiation for the estimation of its efficiency to computationally design mRNA sequences with desired expression levels in prokaryotes. BMC Syst. Biol. 4 (2010)
Hagit Shatkay, Doheon Lee, Min Song, Shamkant B. Navathe
DTMBIO workshop summary. CIKM (2010)
Juhyun Jung, Taewoo Ryu, Yongdeuk Hwang, Eunjung Lee, Doheon Lee
Prediction of Extracellular Matrix Proteins Based on Distinctive Sequence and Domain Characteristics. J. Comput. Biol. 17 (1) (2010)
Dokyun Na, Doheon Lee
: software for designing synthetic ribosome binding sites that yields a desired level of protein expression. Bioinform. 26 (20) (2010)
Thai Quang Tung, Doheon Lee
PSExplorer: whole parameter space exploration for molecular signaling pathway dynamics. Bioinform. 26 (19) (2010)
Younghoon Kim, Imhoi Koo, Byung Hwa Jung, Bong Chul Chung, Doheon Lee
Multivariate classification of urine metabolome profiles for breast cancer diagnosis. DTMBIO (2009)
Hojung Nam, Ki Young Lee, Doheon Lee
Identification of temporal association rules from time-series microarray data sets. BMC Bioinform. 10 (S-3) (2009)
Sejoon Lee, Eunjung Lee, Kwang Hyung Lee, Doheon Lee
Disease Classification Based on the Activities of Interacting Molecular Modules with Condition-Responsive Correlation. BIBM (2009)
Inho Park, Kwang H. Lee, Doheon Lee
Mining cancer genes with running-sum statistics. DTMBIO (2009)
Eunjung Lee, Hyunchul Jung, Predrag Radivojac, Jong-Won Kim, Doheon Lee
Analysis of AML genes in dysregulated molecular networks. BMC Bioinform. 10 (S-9) (2009)
Hong-Hee Won, Inho Park, Eunjung Lee, Jong-Won Kim, Doheon Lee
Comparative analysis of the JAK/STAT signaling through erythropoietin receptor and thrombopoietin receptor using a systems approach. BMC Bioinform. 10 (S-1) (2009)
Hojung Nam, Bong Chul Chung, Younghoon Kim, Ki Young Lee, Doheon Lee
Combining tissue transcriptomics and urine metabolomics for breast cancer biomarker identification. Bioinform. 25 (23) (2009)
Sangwoo Kim, Doheon Lee
Mining metastasis related genes by primary-secondary tumor comparisons from large-scale databases. BMC Bioinform. 10 (S-3) (2009)
Byungwook Lee, Doheon Lee
Protein comparison at the domain architecture level. BMC Bioinform. 10 (S-15) (2009)
Thai Quang Tung, Doheon Lee
A method to improve protein subcellular localization prediction by integrating various biological data sources. BMC Bioinform. 10 (S-1) (2009)
Younghoon Kim, Doheon Lee, Yongseong Cho, Sang Joo Lee
A large-scale gene network inference system for systems biology on supercomputing resources. DTMBIO (2009)
Peter J. Bentley, Doheon Lee
Special Issue on Artificial Immune Systems. J. Math. Model. Algorithms 8 (2) (2009)
Ali Zeeshan Ijaz, Min Song, Doheon Lee
MKEM: a multi-level knowledge emergence model for mining undiscovered public knowledge. DTMBIO (2009)
Hyojin Kang, Eunkyoo Oh, Giltsu Choi, Doheon Lee
Genome-Wide DNA-Binding Specificity of PIL5, a Arabidopsis Basic Helix-Loop-Helix (bHLH) Transcription Factor. BIBM (2008)
Sangwoo Kim, Doheon Lee
Mining metastasis related genes by primary-secondary tumor comparisons from large-scale database. DTMBIO (2008)
Eunjung Lee, Han-Yu Chuang, Jong-Won Kim, Trey Ideker, Doheon Lee
Inferring Pathway Activity toward Precise Disease Classification. PLoS Comput. Biol. 4 (11) (2008)

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Publication Activity (10 Years)

Top Topics

Top Venues

Doheon Lee