David Weese

Publication Activity (10 Years)

Years Active: 2000-2015
Publications (10 Years): 1

Top Venues

Bioinform.

CoRR

RECOMB

EDBT/ICDT Workshops

Free University of Berlin (PHD)

Education History

Free University of Berlin

PHD

Publications

Stefan Canzar, Sandro Andreotti, David Weese, Knut Reinert, Gunnar W. Klau
CIDANE: Comprehensive Isoform Discovery and Abundance Estimation. RECOMB (2015)
Marcel H. Schulz, David Weese, Manuel Holtgrewe, Viktoria Dimitrova, Sijia Niu, Knut Reinert, Hugues Richard
Fiona: a parallel and automatic strategy for read error correction. Bioinform. 30 (17) (2014)
René Rahn, David Weese, Knut Reinert
Journaled string tree - a scalable data structure for analyzing thousands of similar genomes on your laptop. Bioinform. 30 (24) (2014)
Enrico Siragusa, David Weese, Knut Reinert
Scalable string similarity search/join with approximate seeds and multiple backtracking. EDBT/ICDT Workshops (2013)
David Weese, Manuel Holtgrewe, Knut Reinert
RazerS 3: Faster, fully sensitive read mapping. Bioinform. 28 (20) (2012)
Enrico Siragusa, David Weese, Knut Reinert
Fast and sensitive read mapping with approximate seeds and multiple backtracking CoRR (2012)
Anne-Katrin Emde, Marcel H. Schulz, David Weese, Ruping Sun, Martin Vingron, Vera M. Kalscheuer, Stefan A. Haas, Knut Reinert
Detecting genomic indel variants with exact breakpoints in single- and paired-end sequencing data using SplazerS. Bioinform. 28 (5) (2012)
Manuel Holtgrewe, Anne-Katrin Emde, David Weese, Knut Reinert
A Novel And Well-Defined Benchmarking Method For Second Generation Read Mapping. BMC Bioinform. 12 (2011)
Birte Kehr, David Weese, Knut Reinert
STELLAR: fast and exact local alignments. BMC Bioinform. 12 (S-9) (2011)
Anne-Katrin Emde, Marcel Grunert, David Weese, Knut Reinert, Silke R. Sperling
MicroRazerS: rapid alignment of small RNA reads. Bioinform. 26 (1) (2010)
Tobias Rausch, Sergey Koren, Gennady Denisov, David Weese, Anne-Katrin Emde, Andreas Döring, Knut Reinert
and reference-guided sequence assembly of short reads. Bioinform. 25 (9) (2009)
David Weese, Marcel H. Schulz
Efficient String Mining under Constraints Via the Deferred Frequency Index. ICDM (2008)
Marcel H. Schulz, David Weese, Tobias Rausch, Andreas Döring, Knut Reinert, Martin Vingron
Fast and Adaptive Variable Order Markov Chain Construction. WABI (2008)
Tobias Rausch, Anne-Katrin Emde, David Weese, Andreas Döring, Cédric Notredame, Knut Reinert
Segment-based multiple sequence alignment. ECCB (2008)
Andreas Döring, David Weese, Tobias Rausch, Knut Reinert
SeqAn An efficient, generic C++ library for sequence analysis. BMC Bioinform. 9 (2008)
Sebastian von Klinski, Claus Derz, David Weese, Thomas Tolxdorff
Model-based image processing using snakes and mutual information. Medical Imaging: Image Processing (2000)

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Publication Activity (10 Years)

Top Topics

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David Weese