A Novel And Well-Defined Benchmarking Method For Second Generation Read Mapping.
Manuel HoltgreweAnne-Katrin EmdeDavid WeeseKnut ReinertPublished in: BMC Bioinform. (2011)
Keyphrases
- high accuracy
- significant improvement
- objective function
- mapping function
- fully automatic
- high precision
- segmentation method
- detection method
- theoretical analysis
- experimental evaluation
- cost function
- k means
- multiresolution
- preprocessing
- probabilistic model
- feature set
- computationally efficient
- support vector machine svm
- error rate
- learning algorithm
- matching algorithm
- genetic algorithm
- machine learning
- evaluation method
- neural network