David Pérez-Rey

Publication Activity (10 Years)

Years Active: 2003-2023
Publications (10 Years): 13

Top Topics

Clinical Trials

Semantic Interoperability

Top Venues

Publications

Aída Muñoz Monjas, David Rubio Ruiz, David Pérez-Rey, Matvey B. Palchuk
Automatic Outlier Detection in Laboratory Result Distributions Within a Real World Data Network. MIE (2023)
Miguel Pedrera-Jiménez, Noelia García-Barrio, Gema Hernandez-Ibarburu, Blanca Baselga, Alvar Javier Blanco-Martínez, Fernando Calvo-Boyero, Alba Gutiérrez-Sacristan, Víctor Quiros, Juan Luis Cruz-Bermúdez, José Luis Bernal-Sobrino, Laura Meloni, David Pérez-Rey, Matvey B. Palchuk, Isaac S. Kohane, Pablo Serrano
Building an i2b2-Based Population Repository for COVID-19 Research. MIE (2022)
A. Millan-Fernandez-Montes, David Pérez-Rey, G. Hernandez-Ibarburu, Matvey B. Palchuk, Christina Mueller, Brecht Claerhout
Mapping clinical procedures to the ICD-10-PCS: The German operation and procedure classification system use case. J. Biomed. Informatics 109 (2020)
Lydia González, David Pérez-Rey, Enrique Alonso-Oset, Gema Hernández, Pablo Serrano, Miguel Pedrera, Agustín Gómez, Kristof de Schepper, Titus Crepain, Brecht Claerhout
Building an I2B2-Based Population Repository for Clinical Research. MIE (2020)
G. Hernandez-Ibarburu, David Pérez-Rey, Enrique Alonso-Oset, Raúl Alonso-Calvo, David Voets, Christina Mueller, Brecht Claerhout
ICD-10-PCS extension with ICD-9 procedure codes to support integrated access to clinical legacy data. Int. J. Medical Informatics 122 (2019)
G. Hernandez-Ibarburu, David Pérez-Rey, Enrique Alonso-Oset, Raúl Alonso-Calvo, Kristof de Schepper, Laura Meloni, Brecht Claerhout
ICD-10-CM extension with ICD-9 diagnosis codes to support integrated access to clinical legacy data. Int. J. Medical Informatics 129 (2019)
Alejandro Renato, José Castaño, Maria del Pilar Avila Williams, Hernán Berinsky, Maria Laura Gambarte, Hee Joon Park, David Pérez-Rey, Carlos Otero, Daniel R. Luna
A Machine Translation Approach for Medical Terms. HEALTHINF (2018)
Pilar Ávila, José Castaño, Hernán Berinsky, Maria Laura Gambarte, Hee Joon Park, David Pérez-Rey, Carlos Otero, Mario Albornoz, Daniel R. Luna
Selection of Semantic Relevant Healthcare Services Subsets. MIE (2018)
Raúl Alonso-Calvo, Sergio Paraiso-Medina, David Pérez-Rey, Enrique Alonso-Oset, Ruud van Stiphout, Sheng Yu, Marian Taylor, Francesca Buffa, Carlos Fernandez-Lozano, Alejandro Pazos, Victor Maojo
A semantic interoperability approach to support integration of gene expression and clinical data in breast cancer. Comput. Biol. Medicine 87 (2017)
David Pérez-Rey, Raúl Alonso-Calvo, Sergio Paraiso-Medina, Cristian R. Munteanu, Miguel García-Remesal
SNOMED2HL7: A tool to normalize and bind SNOMED CT concepts to the HL7 Reference Information Model. Comput. Methods Programs Biomed. 149 (2017)
Haridimos Kondylakis, Brecht Claerhout, Keyur Mehta, Lefteris Koumakis, Jasper van Leeuwen, Kostas Marias, David Pérez-Rey, Kristof de Schepper, Manolis Tsiknakis, Anca I. D. Bucur
The INTEGRATE project: Delivering solutions for efficient multi-centric clinical research and trials. J. Biomed. Informatics 62 (2016)
José Castaño, Maria Laura Gambarte, Hee Joon Park, Maria del Pilar Avila Williams, David Pérez-Rey, Fernando Campos, Daniel R. Luna, Sonia E. Benitez, Hernán Berinsky, Sofía Zanetti
A Machine Learning Approach to Clinical Terms Normalization. BioNLP@ACL (2016)
Anca I. D. Bucur, Jasper van Leeuwen, Njin-Zu Chen, David Pérez-Rey, Raúl Alonso-Calvo, Sergio Paraiso-Medina, Brecht Claerhout, Kristof de Schepper, Keyur Mehta, Cyril Krykwinski
Cohort Selection and Management Application Leveraging Standards-based Semantic Interoperability and a Groovy DSL. CRI (2016)
Jasper van Leeuwen, Anca I. D. Bucur, Jeroen Keijser, Brecht Claerhout, Kristof de Schepper, David Pérez-Rey, Raúl Alonso-Calvo
Recruitment and feasibility tool. J. Clin. Bioinform. 5 (S-1) (2015)
Sergio Paraiso-Medina, David Pérez-Rey, Anca I. D. Bucur, Brecht Claerhout, Raúl Alonso-Calvo
Semantic Normalization and Query Abstraction Based on SNOMED-CT and HL7: Supporting Multicentric Clinical Trials. IEEE J. Biomed. Health Informatics 19 (3) (2015)
Raúl Alonso-Calvo, David Pérez-Rey, Sergio Paraiso-Medina, Brecht Claerhout, Philippe Hennebert, Anca I. D. Bucur
Enabling semantic interoperability in multi-centric clinical trials on breast cancer. Comput. Methods Programs Biomed. 118 (3) (2015)
Anca I. D. Bucur, Jasper van Leeuwen, Njin-Zu Chen, Brecht Claerhout, Kristof de Schepper, David Pérez-Rey, Sergio Paraiso-Medina, Keyur Mehta
Cohort Selection Tool for Efficient Exploration of Patient Data. AMIA (2015)
Anca I. D. Bucur, Jasper van Leeuwen, Njin-Zu Chen, Brecht Claerhout, Kristof de Schepper, David Pérez-Rey, Raúl Alonso-Calvo, Lina Pugliano, Kamal Saini
Supporting Patient Screening to Identify Suitable Clinical Trials. MIE (2014)
Ahmed Ibrahim, Anca I. D. Bucur, Andre Dekker, M. Scott Marshall, David Pérez-Rey, Raúl Alonso-Calvo, Holger Stenzhorn, Sheng Yu, Cyril Krykwinski, Anouar Laarif, Keyur Mehta
Analysis of the Suitability of Existing Medical Ontologies for Building a Scalable Semantic Interoperability Solution Supporting Multi-site Collaboration in Oncology. BIBE (2014)
Jasper van Leeuwen, Anca I. D. Bucur, Brecht Claerhout, Kristof de Schepper, David Pérez-Rey, Raúl Alonso-Calvo
BRIDG-based Trial Metadata Repository - Need for Standardized Machine Interpretable Trial Descriptions. HEALTHINF (2014)
Anca I. D. Bucur, Jasper van Leeuwen, Njin-Zu Chen, Kristof de Schepper, Brecht Claerhout, David Pérez-Rey, Raúl Alonso-Calvo, Kamal Saini
Patient Screening Application to Identify Suitable Clinical Trials. AMIA (2014)
Brecht Claerhout, Kristof de Schepper, David Pérez-Rey, Anca I. D. Bucur
Contextualisation of ABAC Attributes through a Generic XACML Functionality Extension Mechanism. HEALTHINF (2013)
Brecht Claerhout, Kristof de Schepper, David Pérez-Rey, Raúl Alonso-Calvo, Jasper van Leeuwen, Anca I. D. Bucur
Implementing patient recruitment on EURECA semantic integration platform through a Groovy query engine. BIBE (2013)
Santiago Aso, David Pérez-Rey, Raúl Alonso-Calvo, Antonio Rico-Diez, Anca I. D. Bucur, Brecht Claerhout, Victor Maojo
Analyzing SNOMED CT and HL7 Terminology Binding for Semantic Interoperability on Post-Genomic Clinical Trials. MedInfo (2013)
Antonio Rico-Diez, Santiago Aso, David Pérez-Rey, Raúl Alonso-Calvo, Anca I. D. Bucur, Brecht Claerhout, Victor Maojo
SNOMED CT normal form and HL7 RIM binding to normalize clinical data from cancer trials. BIBE (2013)
Brecht Claerhout, Kristof de Schepper, David Pérez-Rey, Raúl Alonso-Calvo, Jasper van Leeuwen, Anca I. D. Bucur
Leveraging Dynamic Programming Languages for Efficient Implementation of a Patient Cohort Selection Engine. AMIA (2013)
Brecht Claerhout, Kristof de Schepper, David Pérez-Rey, Anca I. D. Bucur
Supporting Contextualisation of ABAC Attributes Through a Generic XACML Request Handling Mechanism. BIOSTEC (Selected Papers) (2013)
Sergio Paraiso-Medina, David Pérez-Rey, Raúl Alonso-Calvo, Brecht Claerhout, Kristof de Schepper, Philippe Hennebert, Jérôme Lhaut, Jasper van Leeuwen, Anca I. D. Bucur
Semantic Interoperability Solution for Multicentric Breast Cancer Trials at the Integrate EU Project. HEALTHINF (2013)
Juan M. Moratilla, Raúl Alonso-Calvo, Gema Molina-Vaquero, Sergio Paraiso-Medina, David Pérez-Rey, Victor Maojo
A Data Model Based on Semantically Enhanced HL7 RIM for Sharing Patient Data of Breast Cancer Clinical Trials. MedInfo (2013)
Anca I. D. Bucur, Jasper van Leeuwen, David Pérez-Rey, Raúl Alonso-Calvo, Brecht Claerhout, Kristof de Schepper
Identifying the semantics of eligibility criteria of clinical trials based on relevant medical ontologies. BIBE (2012)
Victor Maojo, Martin Fritts, Fernando Martín-Sánchez, Diana de la Iglesia, Raul E. Cachau, Miguel García-Remesal, José Crespo, Joyce A. Mitchell, Alberto Anguita, Nathan Baker, José María Barreiro, Sonia E. Benitez, Guillermo de la Calle, Julio C. Facelli, Peter Ghazal, Antoine Geissbühler, Fernando D. González Nilo, Norbert M. Graf, Pierre Grangeat, Isabel Hermosilla, Rada Hussein, Josipa Kern, Sabine Koch, Yannick Legré, Victoria López-Alonso, Guillermo López-Campos, Luciano Milanesi, Vassilis Moustakis, Cristian R. Munteanu, Paula Otero, Alejandro Pazos, David Pérez-Rey, George Potamias, Ferran Sanz, Casimir A. Kulikowski
Nanoinformatics: developing new computing applications for nanomedicine. Computing 94 (6) (2012)
David Pérez-Rey, Ana Jimenez-Castellanos, Miguel García-Remesal, José Crespo, Victor Maojo
CDAPubMed: a browser extension to retrieve EHR-based biomedical literature. BMC Medical Informatics Decis. Mak. 12 (2012)
Ana Jimenez-Castellanos, Izaskun Fernández, David Pérez-Rey, Elisa Viejo, Francisco Javier Díez, Xabier García de Kortazar, Miguel García-Remesal, Victor Maojo, Antonio Cobo, Francisco del Pozo
Patient-based Literature Retrieval and Integration - A Use Case for Diabetes and Arterial Hypertension. HEALTHINF (2011)
Ana Jimenez-Castellanos, Izaskun Fernández, David Pérez-Rey, Elisa Viejo, Francisco Javier Díez, Xabier García de Kortazar, Miguel García-Remesal, Victor Maojo, Antonio Cobo, Francisco del Pozo
Biomedical Literature Retrieval Based on Patient Information. BIOSTEC (Selected Papers) (2011)
Raúl Alonso-Calvo, José Crespo, Victor Maojo, Alberto Muñoz, Miguel García-Remesal, David Pérez-Rey
Cloud Computing Service for Managing Large Medical Image Data-Sets Using Balanced Collaborative Agents. PAAMS (2011)
Miguel García-Remesal, Alejandro Cuevas, David Pérez-Rey, Luis Martín, Alberto Anguita, Diana de la Iglesia, Guillermo de la Calle, José Crespo, Victor Maojo
PubDNA Finder: a web database linking full-text articles to sequences of nucleic acids. Bioinform. 26 (21) (2010)
Jesús Martínez-Mateo, Susana Muñoz-Hernández, David Pérez-Rey
A Discussion of Thin Client Technology for Computer Labs CoRR (2010)
Miguel García-Remesal, Alejandro Cuevas, Victoria López-Alonso, Guillermo López-Campos, Guillermo de la Calle, Diana de la Iglesia, David Pérez-Rey, José Crespo, Fernando Martín-Sánchez, Victor Maojo
A method for automatically extracting infectious disease-related primers and probes from the literature. BMC Bioinform. 11 (2010)
Jesús Martínez-Mateo, Susana Muñoz-Hernández, David Pérez-Rey
c&d-Learning Implementation Architecture Adapting e-Learning to Developing Countries. CSEDU (1) (2009)
David Pérez-Rey, Victor Maojo
An Ontology-Based Method to Link Database Integration and Data Mining within a Biomedical Distributed KDD. AIME (2009)
Alberto Anguita, David Pérez-Rey, José Crespo, Victor Maojo
Automatic Generation of Integration and Preprocessing Ontologies for Biomedical Sources in a Distributed Scenario. CBMS (2008)
Raúl Alonso-Calvo, Victor Maojo, Holger Billhardt, Fernando Martín-Sánchez, Miguel García-Remesal, David Pérez-Rey
An agent- and ontology-based system for integrating public gene, protein, and disease databases. J. Biomed. Informatics 40 (1) (2007)
David Pérez-Rey, Alberto Anguita, José Crespo
OntoDataClean: Ontology-Based Integration and Preprocessing of Distributed Data. ISBMDA (2006)
David Pérez-Rey, Victor Maojo, Miguel García-Remesal, Raúl Alonso-Calvo, Holger Billhardt, Fernando Martín-Sánchez, A. Sousa
ONTOFUSION: Ontology-based integration of genomic and clinical databases. Comput. Biol. Medicine 36 (7-8) (2006)
Miguel García-Remesal, Victor Maojo, Holger Billhardt, José Crespo, Raúl Alonso-Calvo, David Pérez-Rey, Fernando Martin, A. Sousa
ARMEDA II: Supporting Genomic Medicine through the Integration of Medical and Genetic Databases. BIBE (2004)
David Pérez-Rey, Victor Maojo, Miguel García-Remesal, Raúl Alonso-Calvo
Biomedical Ontologies in Post-Genomic Information Systems. BIBE (2004)
Óscar Corcho, Asunción Gómez-Pérez, Danilo José Guerrero-Rodríguez, David Pérez-Rey, Alberto Ruiz-Cristina, Teresa Sastre-Toral, Mari Carmen Suárez-Figueroa
Evaluation experiment of ontology tools' interoperability with the WebODE ontology engineering workbench. EON (2003)