Lefteris Koumakis

Publication Activity (10 Years)

Years Active: 2003-2024
Publications (10 Years): 32

Top Topics

Medical Information

Natural Language Processing

Cancer Patients

Gene Regulatory

Top Venues

J. Biomed. Informatics

Publications

Ourania Manta, Nikolaos Vasileiou, Olympia Giannakopoulou, Konstantinos Bromis, Ioannis N. Kouris, Maria Haritou, Lefteris Koumakis, George Spanoudakis, Irina E. Nicolae, C. Septimiu Nechifor, Miltiadis Kokkonidis, Michalis Vakalelis, Yorgos Goletsis, Maria Roumpi, Dimitrios I. Fotiadis, Heraklis Galanis, Panagiotis Dimitrakopoulos, George K. Matsopoulos, Dimitrios D. Koutsouris
Architectural Design for Enhancing Remote Patient Monitoring in Heart Failure: A Case Study of the RETENTION Project. BIOSTEC (2) (2024)
Georgia Eirini Trouli, Alexandros Pappas, Georgia Troullinou, Lefteris Koumakis, Nikos Papadakis, Haridimos Kondylakis
SumMER: Structural Summarization for RDF/S KGs. Algorithms 16 (1) (2023)
Georgia S. Karanasiou, Lefteris Koumakis, Stelios Sfakianakis, Georgios C. Manikis, Gregory Kalliatakis, A. Antoniades, L. Lakkas, D. Mauri, C. Cipolla, Ketti Mazzocco, A. Papakonstantinou, G. Filippatos, A. Constantinidou, B. Seruga, C. Conti, Anca I. D. Bucur, E. Pacella, Kostas Marias, Manolis Tsiknakis, Dimitris I. Fotiadis
CARDIOCARE: An integrated platform for the management of elderly multimorbid patients with breast cancer therapy induced cardiac toxicity. EMBC (2023)
Vasileios S. Loukas, Thomas Kassiotis, Ignacio Lamata Martinez, Lefteris Koumakis, Jeroen Bruinsma, Roberto Pasciuti, Monica Balatresi, Ville Tenhunen, Adam Fiakkas, Lelia Ataliani, Georgia S. Karanasiou, Manolis Tsiknakis, Hannes Hilberger, Markus Bödenler, Bianca Schnalzer, Simone Huber, Mattia Pirani, Matteo Colombo, Sten Hanke, Dimitrios I. Fotiadis
LETHE: A Digital Intervention for Cognitive Decline. EMBC (2023)
Cathy Payne, Haridimos Kondylakis, Lefteris Koumakis
Editorial: Digital Health for Palliative Care. Frontiers Digit. Health 4 (2022)
Panos Bonotis, Achilleas Chytas, Giorgos Zacharioudakis, Christina Karamanidou, Lefteris Koumakis, Kostas Stamatopoulos, Pantelis Natsiavas
Randomization of Clinical Trial Participants via an Integrated Web Service. MIE (2021)
Vaggelis Chaniotakis, Lefteris Koumakis, Haridimos Kondylakis, George Notas, Dimitris Plexousakis, Manolis Tsiknakis
Predictive Analytics Based on Open Source Technologies for Acute Respiratory Distress Syndrome. CBMS (2021)
Maria Chatzimina, Helen Papadaki, Charalampos Pontikoglou, Lefteris Koumakis, Kostas Marias, Manolis Tsiknakis
Designing a conversational agent for patients with hematologic malignancies: Usability and Usefulness Study. BHI (2021)
Lefteris Koumakis, Fatima Schera, Heather Parker, Panos Bonotis, Maria Chatzimina, Panagiotis Argyropaidas, Giorgos Zacharioudakis, Michael Schäfer, Christine Kakalou, Christina Karamanidou, Jana Didi, Eleni Kazantzaki, Lydia Scarfo, Kostas Marias, Pantelis Natsiavas
Fostering Palliative Care Through Digital Intervention: A Platform for Adult Patients With Hematologic Malignancies. Frontiers Digit. Health 3 (2021)
Georgia Eirini Trouli, Georgia Troullinou, Lefteris Koumakis, Nikolaos Papadakis, Haridimos Kondylakis
SumMER: Summarizing RDF/S KBs using Machine LEaRning. ISWC (Posters/Demos/Industry) (2021)
Haridimos Kondylakis, Anca I. D. Bucur, Chiara Crico, Feng Dong, Norbert M. Graf, Stefan Hoffman, Lefteris Koumakis, Alice Manenti, Kostas Marias, Ketti Mazzocco, Gabriella Pravettoni, Chiara Renzi, Fatima Schera, Stefano Triberti, Manolis Tsiknakis, Stephan Kiefer
Patient empowerment for cancer patients through a novel ICT infrastructure. J. Biomed. Informatics 101 (2020)
Haridimos Kondylakis, Lefteris Koumakis, Manolis Tsiknakis, Stephan Kiefer
Personally Managed Health Data: Barriers, Approaches, and a Roadmap for the Future. J. Biomed. Informatics 106 (2020)
Haridimos Kondylakis, Lefteris Koumakis, Dimitrios G. Katehakis, Angelina Kouroubali, Kostas Marias, Manolis Tsiknakis, Panagiotis G. Simos, Evangelos Karademas
Developing a Data Infrastructure for Enabling Breast Cancer Women to BOUNCE Back. CBMS (2019)
Alexandros Kyriakakis, Lefteris Koumakis, Alexandros Kanterakis, Galateia Iatraki, Manolis Tsiknakis, George Potamias
Enabling Ontology-Based Search: A Case Study in the Bioinformatics Domain. BIBE (2019)
Christos Maramis, Sheila Payne, Sarka Pospisilova, Richard Rosenquist, Paolo Ghia, Charalampos Pontikoglou, Annette Sander, Michael Doubek, Norbert M. Graf, Julie Ling, Julia Downing, Christina Karamanidou, Elpida Pavi, Vassilis Koutkias, Fatima Schera, Stephan Kiefer, Lefteris Koumakis, Konstantinos Marias, Stefan Hoffman, Heather Parker, Jonathan Reston
Using Electronic Patient Reported Outcomes to Foster Palliative Cancer Care: The MyPal Approach. BIBE (2019)
Angelina Kouroubali, Haridimos Kondylakis, Lefteris Koumakis, George Papagiannakis, Paul Zikas, Dimitrios G. Katehakis
iSupport: Building a Resilience Support Tool for Improving the Health Condition of the Patient During the Care Path. pHealth (2019)
Alexandros Kanterakis, Galateia Iatraki, Konstantina Pityanou, Lefteris Koumakis, Nikos Kanakaris, Nikos I. Karacapilidis, George Potamias
Towards Reproducible Bioinformatics: The OpenBio-C Scientific Workflow Environment. BIBE (2019)
Marios Vardalachakis, Haridimos Kondylakis, Lefteris Koumakis, Angelina Kouroubali, Dimitrios G. Katehakis
ShinyAnonymizer: A Tool for Anonymizing Health Data. ICT4AWE (2019)
Maria Chatzimina, Lefteris Koumakis, Kostas Marias, Manolis Tsiknakis
Employing Conversational Agents in Palliative Care: A Feasibility Study and Preliminary Assessment. BIBE (2019)
Georgios C. Manikis, Ruth Pat-Horenczyk, Dimitrios I. Fotiadis, Manolis Tsiknakis, Panagiotis G. Simos, Konstantina Kourou, Paula Poikonen-Saksela, Haridimos Kondylakis, Evangelos Karademas, Kostas Marias, Dimitrios G. Katehakis, Lefteris Koumakis, Angelina Kouroubali
Computational Modeling of Psychological Resilience Trajectories During Breast Cancer Treatment. BIBE (2019)
Alexandros Kanterakis, Nikos I. Karacapilidis, Lefteris Koumakis, George Potamias
On the development of an open and collaborative bioinformatics research environment. KES (2018)
Haridimos Kondylakis, Angelina Kouroubali, Lefteris Koumakis, Alejandro Rivero Rodriguez, Santiago Hors-Fraile, Dimitrios G. Katehakis
Designing a Novel Technical Infrastructure for Chronic Pain Self-Management. pHealth (2018)
Haridimos Kondylakis, Lefteris Koumakis, Manolis Tsiknakis, Kostas Marias
Implementing a data management infrastructure for big healthcare data. BHI (2018)
Haridimos Kondylakis, Lefteris Koumakis, Stephanie Hänold, Iheanyi Nwankwo, Nikolaus Forgó, Kostas Marias, Manolis Tsiknakis, Norbert M. Graf
Donor's support tool: Enabling informed secondary use of patient's biomaterial and personal data. Int. J. Medical Informatics 97 (2017)
Lefteris Koumakis, Panos Roussos, George Potamias
minepath.org: a free interactive pathway analysis web server. Nucleic Acids Res. 45 (Webserver-Issue) (2017)
Haridimos Kondylakis, Anca I. D. Bucur, Feng Dong, Chiara Renzi, Andrea Manfrinati, Norbert M. Graf, Stefan Hoffman, Lefteris Koumakis, Gabriella Pravettoni, Kostas Marias, Manolis Tsiknakis, Stephan Kiefer
iManageCancer: Developing a Platform for Empowering Patients and Strengthening Self-Management in Cancer Diseases. CBMS (2017)
Lefteris Koumakis, Haridimos Kondylakis, Maria Chatzimina, Galateia Iatraki, Panagiotis Argyropaidas, Eleni Kazantzaki, Manolis Tsiknakis, Stephan Kiefer, Kostas Marias
Designing smart analytical data services for a personal health framework. pHealth (2016)
Eleni Kazantzaki, Haridimos Kondylakis, Lefteris Koumakis, Kostas Marias, Manolis Tsiknakis, Chiara Fioretti, Alessandra Gorini, Ketti Mazzocco, Chiara Renzi, Gabriella Pravettoni
Psycho-emotional tools for better treatment adherence and therapeutic outcomes for cancer patients. pHealth (2016)
Haridimos Kondylakis, Brecht Claerhout, Keyur Mehta, Lefteris Koumakis, Jasper van Leeuwen, Kostas Marias, David Pérez-Rey, Kristof de Schepper, Manolis Tsiknakis, Anca I. D. Bucur
The INTEGRATE project: Delivering solutions for efficient multi-centric clinical research and trials. J. Biomed. Informatics 62 (2016)
Haridimos Kondylakis, Lefteris Koumakis, Manolis Tsiknakis, Kostas Marias, Stephan Kiefer
Big Data in Support of the Digital Cancer Patient. ERCIM News 2016 (104) (2016)
Anca I. D. Bucur, Jasper van Leeuwen, Nikolaos A. Christodoulou, Kamana Sigdel, Katerina Argyri, Lefteris Koumakis, Norbert M. Graf, Georgios S. Stamatakos
Workflow-driven clinical decision support for personalized oncology. BMC Medical Informatics Decis. Mak. 16 (S-2) (2016)
Lefteris Koumakis, Alexandros Kanterakis, Evgenia Kartsaki, Maria Chatzimina, Michalis E. Zervakis, Manolis Tsiknakis, Despoina Vassou, Dimitris Kafetzopoulos, Kostas Marias, Vassilis Moustakis, George Potamias
MinePath: Mining for Phenotype Differential Sub-paths in Molecular Pathways. PLoS Comput. Biol. 12 (11) (2016)
Irini Genitsaridi, Haridimos Kondylakis, Lefteris Koumakis, Kostas Marias, Manolis Tsiknakis
Evaluation of personal health record systems through the lenses of EC research projects. Comput. Biol. Medicine 59 (2015)
Pepi Sfakianaki, Lefteris Koumakis, Stelios Sfakianakis, Galateia Iatraki, George Zacharioudakis, Norbert M. Graf, Kostas Marias, Manolis Tsiknakis
Semantic biomedical resource discovery: a Natural Language Processing framework. BMC Medical Informatics Decis. Mak. 15 (2015)
Lefteris Koumakis, George Potamias, Kostas Marias, Manolis Tsiknakis
An algorithmic approach for the effect of transcription factor binding sites over functional gene regulatory networks. BIBE (2015)
Nina Hochedlinger, Michael Nitzlnader, Markus Falgenhauer, Stefan Welte, Dieter Hayn, Lefteris Koumakis, George Potamias, Manolis Tsiknakis, Davide Saraceno, Eugenia Rinaldi, Ruth Ladenstein, Günter Schreier
Standardized Data Sharing in a Paediatric Oncology Research Network - A Proof-of-Concept Study. eHealth (2015)
Haridimos Kondylakis, Lefteris Koumakis, Eleni Kazantzaki, Maria Chatzimina, Maria Psaraki, Kostas Marias, Manolis Tsiknakis
Patient Empowerment through Personal Medical Recommendations. MedInfo (2015)
Lefteris Koumakis, Kamana Sigdel, George Potamias, Stelios Sfakianakis, Jasper van Leeuwen, George Zacharioudakis, Vassilis Moustakis, Michalis E. Zervakis, Anca I. D. Bucur, Kostas Marias, Norbert M. Graf, Manolis Tsiknakis
Bridging miRNAs and pathway analysis in clinical decision support: a case study in nephroblastoma. Netw. Model. Anal. Health Informatics Bioinform. 4 (1) (2015)
Haridimos Kondylakis, Lefteris Koumakis, Maria Psaraki, Georgia Troullinou, Maria Chatzimina, Eleni Kazantzaki, Konstantinos Marias, Manolis Tsiknakis
Semantically-enabled Personal Medical Information Recommender. ISWC (Posters & Demos) (2015)
Pepi Sfakianaki, Lefteris Koumakis, Stelios Sfakianakis, Manolis Tsiknakis
Natural Language Processing for Biomedical Tools Discovery: A Feasibility Study and Preliminary Results. BIS (2014)
Haridimos Kondylakis, Lefteris Koumakis, Stefan Rüping, Eleni Kazantzaki, Kostas Marias, Manolis Tsiknakis
PMIR: A Personal Medical Information Recommender. MIE (2014)
Lefteris Koumakis, George Potamias, Stelios Sfakianakis, Vassilis Moustakis, Michalis E. Zervakis, Norbert M. Graf, Manolis Tsiknakis
miRNA Based Pathway Analysis Tool in Nephroblastoma as a Proof of Principle for other Cancer Domains. BIBE (2014)
Irini Genitsaridi, Haridimos Kondylakis, Lefteris Koumakis, Kostas Marias, Manolis Tsiknakis
Towards Intelligent Personal Health Record Systems: Review, Criteria and Extensions. EUSPN/ICTH (2013)
K. D. Kalantzaki, Lefteris Koumakis, Ekaterini S. Bei, Michalis E. Zervakis, George Potamias, Dimitris Kafetzopoulos
Experimental model construction and validation of the ErbB signaling pathway. BIBE (2013)
Lefteris Koumakis, Vassilis Moustakis, Michalis E. Zervakis, Dimitris Kafetzopoulos, George Potamias
Coupling Regulatory Networks and Microarays: Revealing Molecular Regulations of Breast Cancer Treatment Responses. SETN (2012)
Matthew Pediaditis, Manolis Tsiknakis, Lefteris Koumakis, Marianna Karachaliou, Spyridon Voutoufianakis, Pelagia Vorgia
Vision-based absence seizure detection. EMBC (2012)
Haridimos Kondylakis, Lefteris Koumakis, Eirini Genitsaridi, Manolis Tsiknakis, Kostas Marias, Gabriella Pravettoni, Alessandra Gorini, Ketti Mazzocco
IEmS: A collaborative environment for patient empowerment. BIBE (2012)
Lefteris Koumakis, Franco Chiarugi, Vincenzo Lagani, Angelina Kouroubali, Ioannis Tsamardinos
Risk Assessment Models for Diabetes Complications: A Survey of Available Online Tools. MobiHealth (2011)
Alexandros Kanterakis, Giorgos otamias, Giorgos Zacharioudakis, Lefteris Koumakis, Stelios Sfakianakis, Manolis Tsiknakis
Scientific discovery workflows in bioinformatics: A scenario for the coupling of molecular regulatory pathways and gene-expression profiles. MedInfo (2010)
George Potamias, Lefteris Koumakis, Alexandros Kanterakis, Vassilis Moustakis
Towards the Discovery of Reliable Biomarkers from Gene-Expression Profiles: An Iterative Constraint Satisfaction Learning Approach. SETN (2010)
Stelios Sfakianakis, Lefteris Koumakis, George Zacharioudakis, Manolis Tsiknakis
Web-Based Authoring and Secure Enactment of Bioinformatics Workflows. GPC Workshops (2009)
George Zacharioudakis, Lefteris Koumakis, Stelios Sfakianakis, Manolis Tsiknakis
A Semantic Infrastructure for the Integration of Bioinformatics Services. ISDA (2009)
Lefteris Koumakis, Stelios Sfakianakis, Vassilis Moustakis, George Potamias
Discovery of Genotype-to-Phenotype Associations: A Grid-enabled Scientific Workflow Setting. AIAI Workshops (2009)
Stelios Sfakianakis, Norbert M. Graf, Alexander Hoppe, Stefan Rüping, Dennis Wegener, Lefteris Koumakis, George Zacharioudakis
Building a System for Advancing Clinico-Genomic Trials on Cancer. AIAI Workshops (2009)
Eleni G. Christodoulou, Marina Ioannou, Maria Kafousi, Elias Sanidas, Georgios Papagiannakis, Vasiliki Danilatou, Georgia Tsiliki, Thanasis Margaritis, Haridimos Kondylakis, Dimitris Manakanatas, Lefteris Koumakis, Alexandros Kanterakis, Stamatis Vassilaros, Manolis Tsiknakis, Anastasia Analyti, George Potamias, Dimitris Tsiftsis, Efstathios Stathopoulos, Dimitris Kafetzopoulos
A new gene expression signature related to breast cancer estrogen receptor status. BIBE (2008)
George Potamias, Lefteris Koumakis, Alexandros Kanterakis, Vassilis Moustakis, Dimitris Kafetzopoulos, Manolis Tsiknakis
Mining Interesting Clinico-Genomic Associations: The HealthObs Approach. AIAI (2007)
George Potamias, Lefteris Koumakis, Alexandros Kanterakis, Stelios Sfakianakis, Anastasia Analyti, Vassilis Moustakis, Dimitris Kafetzopoulos, Stefan Rüping, Manolis Tsiknakis
Knowledge Discovery Scientific Workflows in Clinico-Genomics. ICTAI (1) (2007)
Lefteris Koumakis, Vassilis Moustakis, Alexandros Kanterakis, George Potamias
Mining Time Series with Mine Time. SETN (2006)
George Potamias, Lefteris Koumakis, Vassilis Moustakis
Mining XML Clinical Data: the HealthObs System. Ingénierie des Systèmes d Inf. 10 (1) (2005)
George Potamias, Lefteris Koumakis, Vassilis Moustakis
Gene Selection via Discretized Gene-Expression Profiles and Greedy Feature-Elimination. SETN (2004)
George Potamias, Lefteris Koumakis, Giorgos Charissis, Vassilis Moustakis, Manolis Tsiknakis, Stelios C. Orphanoudakis
Supporting Population Centered Medical Decision Making: Design Recommendations and Preliminary Assessment. HCI (4) (2003)