David Ellinghaus

Publication Activity (10 Years)

Years Active: 2008-2022
Publications (10 Years): 8

Top Topics

Information Gain

Logistic Regression

Top Venues

IEEE ACM Trans. Comput. Biol. Bioinform.

Source Code Biol. Medicine

Publications

Malte Rühlemann, Eike Matthias Wacker, David Ellinghaus, Andre Franke
MAGScoT: a fast, lightweight and accurate bin-refinement tool. Bioinform. 38 (24) (2022)
Lars Wienbrandt, David Ellinghaus
: fast and accurate genome-wide phasing and imputation in a single tool. Bioinform. 38 (22) (2022)
Lars Wienbrandt, Jan Christian Kässens, David Ellinghaus
Reference-Based Haplotype Phasing with FPGAs. ICCS (3) (2020)
Lars Wienbrandt, Jan Christian Kässens, Matthias Hübenthal, David Ellinghaus
1000× faster than PLINK: Combined FPGA and GPU accelerators for logistic regression-based detection of epistasis. J. Comput. Sci. 30 (2019)
Lars Wienbrandt, Jan Christian Kässens, Matthias Hübenthal, David Ellinghaus
1, 000x Faster Than PLINK: Genome-Wide Epistasis Detection with Logistic Regression Using Combined FPGA and GPU Accelerators. ICCS (2) (2018)
Jörn Bethune, Lars Kraemer, Ingo Thomsen, Andreas Keller, David Ellinghaus, Andre Franke
LitDB - Keeping Track of Research Papers From Your Institute Made Simple. Source Code Biol. Medicine 12 (1) (2017)
Lars Wienbrandt, Jan Christian Kässens, Matthias Hübenthal, David Ellinghaus
Fast Genome-Wide Third-order SNP Interaction Tests with Information Gain on a Low-cost Heterogeneous Parallel FPGA-GPU Computing Architecture. ICCS (2017)
André Lacour, David Ellinghaus, Stefan Schreiber, Andre Franke, Tim Becker
Haplotype synthesis analysis reveals functional variants underlying known genome-wide associated susceptibility loci. Bioinform. 32 (14) (2016)
Jorge González-Domínguez, Lars Wienbrandt, Jan Christian Kässens, David Ellinghaus, Manfred Schimmler, Bertil Schmidt
Parallelizing Epistasis Detection in GWAS on FPGA and GPU-Accelerated Computing Systems. IEEE ACM Trans. Comput. Biol. Bioinform. 12 (5) (2015)
Lars Wienbrandt, Jan Christian Kässens, Jorge González-Domínguez, Bertil Schmidt, David Ellinghaus, Manfred Schimmler
FPGA-based Acceleration of Detecting Statistical Epistasis in GWAS. ICCS (2014)
David Ellinghaus, Stefan Kurtz, Ute Willhoeft
detection of LTR retrotransposons. BMC Bioinform. 9 (2008)