Dan F. DeBlasio

ORCID

Publication Activity (10 Years)

Years Active: 2012-2024
Publications (10 Years): 17

Top Venues

University of Arizona, Tucson, USA (PHD)

Education History

University of Arizona, Tucson, USA

PHD

Publications

Guillaume Marçais, Dan F. DeBlasio, Carl Kingsford
Sketching Methods with Small Window Guarantee Using Minimum Decycling Sets. J. Comput. Biol. 31 (7) (2024)
Guillaume Marçais, Dan F. DeBlasio, Carl Kingsford
Sketching methods with small window guarantee using minimum decycling sets. CoRR (2023)
Maria-Florina Balcan, Dan F. DeBlasio, Travis Dick, Carl Kingsford, Tuomas Sandholm, Ellen Vitercik
How much data is sufficient to learn high-performing algorithms? generalization guarantees for data-driven algorithm design. STOC (2021)
Dan F. DeBlasio, Kwanho Kim, Carl Kingsford
More Accurate Transcript Assembly via Parameter Advising. J. Comput. Biol. 27 (8) (2020)
Maria-Florina Balcan, Dan F. DeBlasio, Travis Dick, Carl Kingsford, Tuomas Sandholm, Ellen Vitercik
How much data is sufficient to learn high-performing algorithms? CoRR (2019)
Guillaume Marçais, Dan F. DeBlasio, Prashant Pandey, Carl Kingsford
Locality-sensitive hashing for the edit distance. Bioinform. 35 (14) (2019)
Dan F. DeBlasio, Fiyinfoluwa Gbosibo, Carl Kingsford, Guillaume Marçais
Practical Universal k-mer Sets for Minimizer Schemes. BCB (2019)
Dan F. DeBlasio, John D. Kececioglu
Adaptive Local Realignment of Protein Sequences. J. Comput. Biol. 25 (7) (2018)
Guillaume Marçais, Dan F. DeBlasio, Carl Kingsford
Asymptotically optimal minimizers schemes. Bioinform. 34 (13) (2018)
Anupama Jigisha, Margherita Francescatto, Farzana Rahman, Nazeefa Fatima, Dan F. DeBlasio, Avinash Kumar Shanmugam, Venkata P. Satagopam, Alberto Santos, Pandurang Kolekar, Magali Michaut, Emre Guney
The ISCB Student Council Internship Program: Expanding computational biology capacity worldwide. PLoS Comput. Biol. 14 (1) (2018)
Mehedi Hassan, Aishwarya Alex Namasivayam, Dan F. DeBlasio, Nazeefa Fatima, Benjamin Siranosian, R. Gonzalo Parra, Bart Cuypers, Sayane Shome, Alexander Miguel Monzon, Julien Fumey, Farzana Rahman
Reflections on a journey: a retrospective of the ISCB Student Council symposium series. BMC Bioinform. (12) (2018)
Dan F. DeBlasio, John D. Kececioglu
Core column prediction for protein multiple sequence alignments. Algorithms Mol. Biol. 12 (1) (2017)
Dan F. DeBlasio, John D. Kececioglu
Boosting Alignment Accuracy by Adaptive Local Realignment. RECOMB (2017)
Dan F. DeBlasio, John D. Kececioglu
Learning Parameter-Advising Sets for Multiple Sequence Alignment. IEEE ACM Trans. Comput. Biol. Bioinform. 14 (5) (2017)
Dan F. DeBlasio, John D. Kececioglu
Predicting Core Columns of Protein Multiple Sequence Alignments for Improved Parameter Advising. WABI (2016)
Dan F. DeBlasio, John D. Kececioglu
Adaptive Local Realignment via Parameter Advising. BCB (2016)
Katie Wilkins, Mehedi Hassan, Margherita Francescatto, Jakob B. Jespersen, R. Gonzalo Parra, Bart Cuypers, Dan F. DeBlasio, Alexander Junge, Anupama Jigisha, Farzana Rahman, Griet Laenen, Sander Willems, Lieven Thorrez, Yves Moreau, Nagarajan Raju, Sonia P. Chothani, C. Ramakrishnan, Masakazu Sekijima, M. Michael Gromiha, Paddy J. Slator, Nigel J. Burroughs, Przemyslaw Szalaj, Zhonghui Tang, Paul J. Michalski, Oskar Luo, Xingwang Li, Yijun Ruan, Dariusz Plewczynski, Giulia Fiscon, Emanuel Weitschek, Massimo Ciccozzi, Paola Bertolazzi, Giovanni Felici, Pieter Meysman, Manu Vanaerschot, Maya Berg, Hideo Imamura, Jean-Claude Dujardin, Kris Laukens, Westa Domanova, James R. Krycer, Rima Chaudhuri, Pengyi Yang, Fatemeh Vafaee, Daniel J. Fazakerley, Sean J. Humphrey, David E. James, Zdenka Kuncic
Highlights from the 11th ISCB Student Council Symposium 2015: Dublin, Ireland. 10 July 2015. BMC Bioinform. 17 (S-3) (2016)
Farzana Rahman, Katie Wilkins, Annika Jacobsen, Alexander Junge, Esmeralda Vicedo, Dan F. DeBlasio, Anupama Jigisha, Tomás Di Domenico
Highlights from the tenth ISCB Student Council Symposium 2014. BMC Bioinform. 16 (S-2) (2015)
Dan F. DeBlasio, John D. Kececioglu
Parameter advising for multiple sequence alignment. BMC Bioinform. 16 (S-2) (2015)
Dan F. DeBlasio, John D. Kececioglu
Ensemble multiple sequence alignment via advising. BCB (2015)
Dan F. DeBlasio, John D. Kececioglu
Learning parameter sets for alignment advising. BCB (2014)
John D. Kececioglu, Dan F. DeBlasio
Accuracy Estimation and Parameter Advising for Protein Multiple Sequence Alignment. J. Comput. Biol. 20 (4) (2013)
Dan F. DeBlasio, Travis J. Wheeler, John D. Kececioglu
Estimating the Accuracy of Multiple Alignments and its Use in Parameter Advising. RECOMB (2012)

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Publication Activity (10 Years)

Top Topics

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Dan F. DeBlasio