Changhui Yan

Publication Activity (10 Years)

Years Active: 2004-2022
Publications (10 Years): 7

Top Topics

Top Venues

J. Bioinform. Comput. Biol.

J. Comput. Biol.

Publications

Vishwajeet Marathe, Changhui Yan
Evolution Of SARS-CoV-2 In The Presence Of Vaccines. BIBM (2022)
Yuan Liu, Changhui Yan
Impacts of reference selection on the assembly of suspicious coronavirus genome. J. Bioinform. Comput. Biol. 19 (3) (2021)
Yuan Liu, Changhui Yan
A Novel Spatial Feature For Predicting Lysine Malonylation Sites Using Machine Learning. BIBM (2020)
Yuan Liu, Yongchao Ma, Evan Salsman, Frank A. Manthey, Elias M. Elias, Xuehui Li, Changhui Yan
An enrichment method for mapping ambiguous reads to the reference genome for NGS analysis. J. Bioinform. Comput. Biol. 17 (6) (2019)
Wen Cheng, Changhui Yan
A Graph Approach to Mining Biological Patterns in the Binding Interfaces. J. Comput. Biol. 24 (1) (2017)
Qing Sun, Changhui Yan
Mining structure patterns on the protein-DNA interfaces. BIBM (2016)
Wen Cheng, Changhui Yan
Mining graph patterns in the protein-RNA interfaces. BIBM (2015)
Ya Zhu, Changhui Yan
Graph methods for predicting the function of chemical compounds. GrC (2014)
Changhui Yan, Yingfeng Wang
A graph kernel method for DNA-binding site prediction. BMC Syst. Biol. 8 (S-4) (2014)
Changhui Yan, Wen Cheng
Graph methods for protein-nucleotide interactions. BCB (2014)
Wen Cheng, Malinda Sanjaka, Changhui Yan
A nearest neighbor method for predicting solenoid proteins. GrC (2012)
Marco A. Alvarez, Changhui Yan
A new protein graph model for function prediction. Comput. Biol. Chem. 37 (2012)
Marco A. Alvarez, Changhui Yan
A Graph-Based Semantic Similarity Measure for the gene Ontology. J. Bioinform. Comput. Biol. 9 (6) (2011)
Marco A. Alvarez, Xiaojun Qi, Changhui Yan
A shortest-path graph kernel for estimating gene product semantic similarity. J. Biomed. Semant. 2 (2011)
Changhui Yan, Jingru Luo
A Comparison between Transmembrane Helices and Reentrant Loops. BIBE (2010)
Marco A. Alvarez, Changhui Yan
Exploring structural modeling of proteins for kernel-based enzyme discrimination. CIBCB (2010)
Wen Ju, Juan Shan, Changhui Yan, Heng-Da Cheng
Discrimination of disease-related non-synonymous single nucleotide polymorphisms using multi-scale RBF kernel fuzzy support vector machine. Pattern Recognit. Lett. 30 (4) (2009)
Jing Hu, Changhui Yan
Protein subcelluar localisation prediction with improved performance. Int. J. Funct. Informatics Pers. Medicine 1 (3) (2008)
Jing Hu, Changhui Yan
Identification of deleterious non-synonymous single nucleotide polymorphisms using sequence-derived information. BMC Bioinform. 9 (2008)
Jing Hu, Changhui Yan
A method for discovering transmembrane beta-barrel proteins in Gram-negative bacterial proteomes. Comput. Biol. Chem. 32 (4) (2008)
Jing Hu, Changhui Yan
Mining sequence features for DNA-binding site prediction. CIBCB (2008)
Changhui Yan, Jing Hu, Yingfeng Wang
Discrimination of outer membrane proteins with improved performance. BMC Bioinform. 9 (2008)
Jing Hu, Changhui Yan
Predicting Protein Subcelluar Localizations Using Weighted Euclidian Distance. BIBE (2007)
Juan Shan, Yuxuan Wang, Changhui Yan
Toward The Recognition Code Of Protein-DNA Recognition. BIBE (2007)
Michael Terribilini, Jae-Hyung Lee, Changhui Yan, Robert L. Jernigan, Susan Carpenter
Identifying Interaction Sites in "Recalcitrant" Proteins: Predicted Protein and RNA Binding Sites in Rev Proteins of HIV-1 and EIAV Agree with Experimental Data. Pacific Symposium on Biocomputing (2006)
Changhui Yan
A Hidden Markov Model Approach to Model Protein Sequence and Structural Information: Identification of Helix-Turn-Helix DNA-Binding Motif. GrC (2006)
Changhui Yan, Michael Terribilini, Feihong Wu, Robert L. Jernigan, Drena Dobbs, Vasant G. Honavar
Predicting DNA-binding sites of proteins from amino acid sequence. BMC Bioinform. 7 (2006)
Changhui Yan, Jing Hu
A Hidden Markov Model Approach to Identifying HTH Motifs Using Protein Sequence and Predicted Solvent Accessibility. CIBCB (2006)
Michael Terribilini, Jae-Hyung Lee, Changhui Yan, Robert L. Jernigan, Susan Carpenter, Vasant G. Honavar, Drena Dobbs
Identifying Interaction Sites in "Recalcitrant" Proteins: Predicted Protein and Rna Binding Sites in Rev Proteins of Hiv-1 and Eiav Agree with Experimental Data CoRR (2005)
Changhui Yan, Vasant G. Honavar, Drena Dobbs
Identification of interface residues in protease-inhibitor and antigen-antibody complexes: a support vector machine approach. Neural Comput. Appl. 13 (2) (2004)
Changhui Yan, Drena Dobbs, Vasant G. Honavar
A two-stage classifier for identification of protein-protein interface residues. ISMB/ECCB (Supplement of Bioinformatics) (2004)
Taner Z. Sen, Andrzej Kloczkowski, Robert L. Jernigan, Changhui Yan, Vasant G. Honavar, Kai-Ming Ho, Cai-Zhuang Wang, Yungok Ihm, Haibo Cao, Xun Gu, Drena Dobbs
Predicting binding sites of hydrolase-inhibitor complexes by combining several methods. BMC Bioinform. 5 (2004)