A graph kernel method for DNA-binding site prediction.
Changhui YanYingfeng WangPublished in: BMC Syst. Biol. (2014)
Keyphrases
- binding sites
- kernel methods
- protein interaction
- dna sequences
- gene expression
- transcription factors
- statistical significance
- kernel function
- sequence data
- motif discovery
- biological sequences
- feature space
- support vector machine
- machine learning
- support vector
- microarray
- dna binding
- virtual screening
- rademacher complexity
- similarity search
- reproducing kernel hilbert space
- functional modules
- reproducing kernel
- worst case
- training data
- feature selection
- data sets
- protein interaction networks
- transcription factor binding sites
- regulatory elements